RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 MCM6Q14566 821 aa14.33□□□□□ -0.12
VPS13D-205ENST00000473099 Q3C1V9 767 aa14.33□□□□□ -0.12
VPS13D-205ENST00000473099 ZNF658Q5TYW1 1059 aaPredicted RBP14.33□□□□□ -0.12
VPS13D-205ENST00000473099 ZNF746Q6NUN9 644 aaPredicted RBP14.33□□□□□ -0.12
VPS13D-205ENST00000473099 KCNV1Q6PIU1 500 aa14.33□□□□□ -0.12
VPS13D-205ENST00000473099 POTEBQ6S5H4 581 aa14.33□□□□□ -0.12
VPS13D-205ENST00000473099 STAMQ92783 540 aa14.33□□□□□ -0.12
VPS13D-205ENST00000473099 HSD17B14Q9BPX1 270 aa14.33□□□□□ -0.12
VPS13D-205ENST00000473099 SENP7Q9BQF6 1050 aa14.33□□□□□ -0.12
VPS13D-205ENST00000473099 BLZF1Q9H2G9 400 aa14.33□□□□□ -0.12
VPS13D-205ENST00000473099 UNC45AQ9H3U1 944 aa14.33□□□□□ -0.12
VPS13D-205ENST00000473099 IVNS1ABPQ9Y6Y0 642 aa14.33□□□□□ -0.12
VPS13D-205ENST00000473099 ASB14A6NK59 587 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 TMEM88BA6NKF7 163 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 WDR64B1ANS9 1081 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 SPATA31C2B4DYI2 1134 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 EML1O00423 815 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 EYA4O95677 639 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 P4HBP07237 508 aaKnown RBP14.32□□□□□ -0.12
VPS13D-205ENST00000473099 PLA2G4BP0C869 781 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 HSPA1AP0DMV8 641 aaKnown RBP14.32□□□□□ -0.12
VPS13D-205ENST00000473099 HSPA1BP0DMV9 641 aaKnown RBP14.32□□□□□ -0.12
VPS13D-205ENST00000473099 MAPK4P31152 587 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 ASIC1P78348 528 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 CCDC173Q0VFZ6 552 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 STIM1Q13586 685 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 WDR78Q5VTH9 848 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 UNC13DQ70J99 1090 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 LUZP1Q86V48 1076 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 SMAP1Q8IYB5 467 aaPredicted RBP14.32□□□□□ -0.12
VPS13D-205ENST00000473099 ANKRD13CQ8N6S4 541 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 LRRC15Q8TF66 581 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 PURBQ96QR8 312 aaKnown RBP14.32□□□□□ -0.12
VPS13D-205ENST00000473099 NACC1Q96RE7 527 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 PTPN18Q99952 460 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 EXOC1Q9NV70 894 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 KAT6AQ92794 2004 aa14.32□□□□□ -0.12
VPS13D-205ENST00000473099 POTEFA5A3E0 1075 aa14.31□□□□□ -0.12
VPS13D-205ENST00000473099 SOWAHBA6NEL2 793 aa14.31□□□□□ -0.12
VPS13D-205ENST00000473099 CHMP2AO43633 222 aa14.31□□□□□ -0.12
VPS13D-205ENST00000473099 KLRC4O43908 158 aa14.31□□□□□ -0.12
VPS13D-205ENST00000473099 SLITRK3O94933 977 aa14.31□□□□□ -0.12
VPS13D-205ENST00000473099 MYL5Q02045 173 aa14.31□□□□□ -0.12
VPS13D-205ENST00000473099 PSMD2Q13200 908 aa14.31□□□□□ -0.12
VPS13D-205ENST00000473099 ITGB3BPQ13352 177 aaPredicted RBP14.31□□□□□ -0.12
VPS13D-205ENST00000473099 ECM1Q16610 540 aa14.31□□□□□ -0.12
VPS13D-205ENST00000473099 COBLL1Q53SF7 1204 aa14.31□□□□□ -0.12
VPS13D-205ENST00000473099 ISM2Q6H9L7 571 aa14.31□□□□□ -0.12
VPS13D-205ENST00000473099 POTEGQ6S5H5 508 aa14.31□□□□□ -0.12
VPS13D-205ENST00000473099 ZNF467Q7Z7K2 595 aaPredicted RBP14.31□□□□□ -0.12
VPS13D-205ENST00000473099 DHX40Q8IX18 779 aaKnown RBP14.31□□□□□ -0.12
VPS13D-205ENST00000473099 AOPEPQ8N6M6 819 aa14.31□□□□□ -0.12
VPS13D-205ENST00000473099 SYT2Q8N9I0 419 aaPredicted RBP14.31□□□□□ -0.12
VPS13D-205ENST00000473099 MORC4Q8TE76 937 aa14.31□□□□□ -0.12
VPS13D-205ENST00000473099 ZFP91Q96JP5 570 aaPredicted RBP14.31□□□□□ -0.12
VPS13D-205ENST00000473099 UIMC1Q96RL1 719 aa14.31□□□□□ -0.12
VPS13D-205ENST00000473099 ZSWIM4Q9H7M6 989 aa14.31□□□□□ -0.12
VPS13D-205ENST00000473099 KCND2Q9NZV8 630 aa14.31□□□□□ -0.12
VPS13D-205ENST00000473099 ABT1Q9ULW3 272 aaKnown RBP14.31□□□□□ -0.12
VPS13D-205ENST00000473099 MYMKA6NI61 221 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 E9PMD0 336 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 PEX10O60683 326 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 LYPLA2O95372 231 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 KCNA2P16389 499 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 BMP6P22004 513 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 CASP1P29466 404 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 QARSP47897 775 aaKnown RBP14.3□□□□□ -0.12
VPS13D-205ENST00000473099 TAF1CQ15572 869 aaPredicted RBP14.3□□□□□ -0.12
VPS13D-205ENST00000473099 KMT5BQ4FZB7 885 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 KCNK18Q7Z418 384 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 GPBP1Q86WP2 473 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 TPH2Q8IWU9 490 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 CCDC65Q8IXS2 484 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 REM2Q8IYK8 340 aaPredicted RBP14.3□□□□□ -0.12
VPS13D-205ENST00000473099 DDX12PQ92771 950 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 DYDC2Q96IM9 177 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 PORCNQ9H237 461 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 EFCC1Q9HA90 598 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 SLC5A4Q9NY91 659 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 DIS3Q9Y2L1 958 aaKnown RBP14.3□□□□□ -0.12
VPS13D-205ENST00000473099 SAMM50Q9Y512 469 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 CASP8AP2Q9UKL3 1982 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 ASTN1O14525 1302 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 ADGRA2Q96PE1 1338 aa14.3□□□□□ -0.12
VPS13D-205ENST00000473099 A0A087WWV3 80 aa14.29□□□□□ -0.12
VPS13D-205ENST00000473099 DDX39AO00148 427 aaKnown RBP14.29□□□□□ -0.12
VPS13D-205ENST00000473099 RGS20O76081 388 aa14.29□□□□□ -0.12
VPS13D-205ENST00000473099 SSBP05455 408 aaKnown RBP eCLIP14.29□□□□□ -0.12
VPS13D-205ENST00000473099 KRT18P05783 430 aaKnown RBP14.29□□□□□ -0.12
VPS13D-205ENST00000473099 SLC12A3P55017 1021 aa14.29□□□□□ -0.12
VPS13D-205ENST00000473099 CYP4A11Q02928 519 aa14.29□□□□□ -0.12
VPS13D-205ENST00000473099 NEDD9Q14511 834 aa14.29□□□□□ -0.12
VPS13D-205ENST00000473099 DHX8Q14562 1220 aaKnown RBP14.29□□□□□ -0.12
VPS13D-205ENST00000473099 SARM1Q6SZW1 724 aa14.29□□□□□ -0.12
VPS13D-205ENST00000473099 IFNL1Q8IU54 200 aa14.29□□□□□ -0.12
VPS13D-205ENST00000473099 ENOX1Q8TC92 643 aaKnown RBP14.29□□□□□ -0.12
VPS13D-205ENST00000473099 LXNQ9BS40 222 aa14.29□□□□□ -0.12
VPS13D-205ENST00000473099 ZFYVE28Q9HCC9 887 aa14.29□□□□□ -0.12
VPS13D-205ENST00000473099 JPH1Q9HDC5 661 aaPredicted RBP14.29□□□□□ -0.12
VPS13D-205ENST00000473099 RGL1Q9NZL6 768 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms