RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 NRBP1Q9UHY1 535 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 PCDHA4Q9UN74 947 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 CCDC85CA6NKD9 419 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 ADCY6O43306 1168 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 FOSP01100 380 aaPredicted RBP10.38□□□□□ -0.75
SMC4-214ENST00000472991 AKR1A1P14550 325 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 NDUFV2P19404 249 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 GJB2P29033 226 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 ADCYAP1R1P41586 468 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 SOX10P56693 466 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 SKOR1P84550 965 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 GUCY1B3Q02153 619 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 TRIM29Q14134 588 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 STXBP2Q15833 593 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 CCDC144BQ3MJ40 725 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 KRT40Q6A162 431 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 TAPT1Q6NXT6 567 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 PARP9Q8IXQ6 854 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 ZNF775Q96BV0 537 aaPredicted RBP10.38□□□□□ -0.75
SMC4-214ENST00000472991 C8orf76Q96K31 380 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 PDGFCQ9NRA1 345 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 DDX20Q9UHI6 824 aaKnown RBP10.38□□□□□ -0.75
SMC4-214ENST00000472991 SMC3Q9UQE7 1217 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.38□□□□□ -0.75
SMC4-214ENST00000472991 KAT6AQ92794 2004 aa10.38□□□□□ -0.75
SMC4-214ENST00000472991 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.37□□□□□ -0.75
SMC4-214ENST00000472991 TTC24A2A3L6 582 aaPredicted RBP10.37□□□□□ -0.75
SMC4-214ENST00000472991 M0R2N6 131 aa10.37□□□□□ -0.75
SMC4-214ENST00000472991 TRIM66O15016 1216 aa10.37□□□□□ -0.75
SMC4-214ENST00000472991 MMP1P03956 469 aa10.37□□□□□ -0.75
SMC4-214ENST00000472991 GJB1P08034 283 aa10.37□□□□□ -0.75
SMC4-214ENST00000472991 SMPD1P17405 629 aa10.37□□□□□ -0.75
SMC4-214ENST00000472991 KRT2P35908 639 aa10.37□□□□□ -0.75
SMC4-214ENST00000472991 SREBF1P36956 1147 aa10.37□□□□□ -0.75
SMC4-214ENST00000472991 MRPS9P82933 396 aaKnown RBP10.37□□□□□ -0.75
SMC4-214ENST00000472991 PCNX4Q63HM2 1172 aa10.37□□□□□ -0.75
SMC4-214ENST00000472991 GALNT17Q6IS24 598 aa10.37□□□□□ -0.75
SMC4-214ENST00000472991 SEPT14Q6ZU15 432 aa10.37□□□□□ -0.75
SMC4-214ENST00000472991 VSIG10LQ86VR7 867 aa10.37□□□□□ -0.75
SMC4-214ENST00000472991 SNIP1Q8TAD8 396 aaKnown RBP10.37□□□□□ -0.75
SMC4-214ENST00000472991 U2AF1L4Q8WU68 220 aaKnown RBP10.37□□□□□ -0.75
SMC4-214ENST00000472991 BRMS1Q9HCU9 246 aa10.37□□□□□ -0.75
SMC4-214ENST00000472991 FAM184BQ9ULE4 1060 aa10.37□□□□□ -0.75
SMC4-214ENST00000472991 KIF3AQ9Y496 699 aa10.37□□□□□ -0.75
SMC4-214ENST00000472991 TRIP12Q14669 1992 aaPredicted RBP10.36□□□□□ -0.75
SMC4-214ENST00000472991 RBM47A0AV96 593 aaKnown RBP10.36□□□□□ -0.75
SMC4-214ENST00000472991 MSCO60682 206 aa10.36□□□□□ -0.75
SMC4-214ENST00000472991 EIF3JO75822 258 aaKnown RBP10.36□□□□□ -0.75
SMC4-214ENST00000472991 ARIH2O95376 493 aa10.36□□□□□ -0.75
SMC4-214ENST00000472991 RARBP10826 455 aa10.36□□□□□ -0.75
SMC4-214ENST00000472991 PTGS1P23219 599 aa10.36□□□□□ -0.75
SMC4-214ENST00000472991 SMCPP49901 116 aaPredicted RBP10.36□□□□□ -0.75
SMC4-214ENST00000472991 WNT7BP56706 349 aa10.36□□□□□ -0.75
SMC4-214ENST00000472991 ARHGAP4P98171 946 aa10.36□□□□□ -0.75
SMC4-214ENST00000472991 TNFAIP2Q03169 654 aa10.36□□□□□ -0.75
SMC4-214ENST00000472991 NR5A1Q13285 461 aa10.36□□□□□ -0.75
SMC4-214ENST00000472991 TMEM63BQ5T3F8 832 aa10.36□□□□□ -0.75
SMC4-214ENST00000472991 GJC2Q5T442 439 aaPredicted RBP10.36□□□□□ -0.75
SMC4-214ENST00000472991 MCTP2Q6DN12 878 aa10.36□□□□□ -0.75
SMC4-214ENST00000472991 DIS3L2Q8IYB7 885 aaKnown RBP10.36□□□□□ -0.75
SMC4-214ENST00000472991 SCFD2Q8WU76 684 aa10.36□□□□□ -0.75
SMC4-214ENST00000472991 RTEL1Q9NZ71 1219 aa10.36□□□□□ -0.75
SMC4-214ENST00000472991 DACH1Q9UI36 760 aa10.36□□□□□ -0.75
SMC4-214ENST00000472991 SCN10AQ9Y5Y9 1956 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 SYNRGQ9UMZ2 1314 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 TCHHQ07283 1943 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 CCDC194A0A1B0GVG4 234 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 DUSP11O75319 330 aaKnown RBP10.35□□□□□ -0.75
SMC4-214ENST00000472991 STAM2O75886 525 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 SGPL1O95470 568 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 GJA8P48165 433 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 TTLL4Q14679 1199 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 SAFBQ15424 915 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMC4-214ENST00000472991 CTC1Q2NKJ3 1217 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 GNPTABQ3T906 1256 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 IQSEC1Q6DN90 963 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 PTCRAQ6ISU1 281 aaPredicted RBP10.35□□□□□ -0.75
SMC4-214ENST00000472991 XRRA1Q6P2D8 792 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 KRT25Q7Z3Z0 450 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 FBXO18Q8NFZ0 1043 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 TBCKQ8TEA7 893 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 CRYGNQ8WXF5 182 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 COPS5Q92905 334 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 INTS4Q96HW7 963 aaKnown RBP10.35□□□□□ -0.75
SMC4-214ENST00000472991 INPP4AQ96PE3 977 aaPredicted RBP10.35□□□□□ -0.75
SMC4-214ENST00000472991 WDR11Q9BZH6 1224 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 UBIAD1Q9Y5Z9 338 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 MRVI1Q9Y6F6 885 aa10.35□□□□□ -0.75
SMC4-214ENST00000472991 BTBD18B2RXH4 712 aa10.34□□□□□ -0.75
SMC4-214ENST00000472991 AXIN1O15169 862 aa10.34□□□□□ -0.75
SMC4-214ENST00000472991 PGK1P00558 417 aa10.34□□□□□ -0.75
SMC4-214ENST00000472991 TFRCP02786 760 aaKnown RBP10.34□□□□□ -0.75
SMC4-214ENST00000472991 HSP90AA1P07900 732 aaKnown RBP10.34□□□□□ -0.75
SMC4-214ENST00000472991 TXNP10599 105 aaKnown RBP10.34□□□□□ -0.75
SMC4-214ENST00000472991 ITGB5P18084 799 aa10.34□□□□□ -0.75
SMC4-214ENST00000472991 EN2P19622 333 aaPredicted RBP10.34□□□□□ -0.75
SMC4-214ENST00000472991 ZNF76P36508 570 aa10.34□□□□□ -0.75
SMC4-214ENST00000472991 SEMA3FQ13275 785 aa10.34□□□□□ -0.75
SMC4-214ENST00000472991 NONOQ15233 471 aaKnown RBP eCLIP10.34□□□□□ -0.752e-8■■■■■ 98.1
SMC4-214ENST00000472991 LY6KQ17RY6 165 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms