RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 MAP2K2P36507 400 aa14.61□□□□□ -0.07
SCAMP4-207ENST00000472442 FXR2P51116 673 aaKnown RBP eCLIP14.61□□□□□ -0.07
SCAMP4-207ENST00000472442 CYP27A1Q02318 531 aa14.61□□□□□ -0.07
SCAMP4-207ENST00000472442 TTMPQ5BVD1 217 aa14.61□□□□□ -0.07
SCAMP4-207ENST00000472442 CNPY4Q8N129 248 aa14.61□□□□□ -0.07
SCAMP4-207ENST00000472442 AGPAT5Q9NUQ2 364 aa14.61□□□□□ -0.07
SCAMP4-207ENST00000472442 PGAP2Q9UHJ9 254 aa14.61□□□□□ -0.07
SCAMP4-207ENST00000472442 MEIS2O14770 477 aa14.6□□□□□ -0.07
SCAMP4-207ENST00000472442 IPO7O95373 1038 aaKnown RBP14.6□□□□□ -0.07
SCAMP4-207ENST00000472442 BMP3P12645 472 aa14.6□□□□□ -0.07
SCAMP4-207ENST00000472442 TAL1P17542 331 aaPredicted RBP14.6□□□□□ -0.07
SCAMP4-207ENST00000472442 MATR3P43243 847 aaKnown RBP eCLIP14.6□□□□□ -0.07
SCAMP4-207ENST00000472442 SLC7A5Q01650 507 aa14.6□□□□□ -0.07
SCAMP4-207ENST00000472442 NBPF9Q3BBW0 867 aa14.6□□□□□ -0.07
SCAMP4-207ENST00000472442 TSEN2Q8NCE0 465 aaKnown RBP14.6□□□□□ -0.07
SCAMP4-207ENST00000472442 HAS1Q92839 578 aa14.6□□□□□ -0.07
SCAMP4-207ENST00000472442 GJA10Q969M2 543 aa14.6□□□□□ -0.07
SCAMP4-207ENST00000472442 WNT10BO00744 389 aa14.6□□□□□ -0.07
SCAMP4-207ENST00000472442 FKBP15Q5T1M5 1219 aa14.6□□□□□ -0.07
SCAMP4-207ENST00000472442 SMCR8Q8TEV9 937 aaPredicted RBP14.6□□□□□ -0.07
SCAMP4-207ENST00000472442 NHEJ1Q9H9Q4 299 aaPredicted RBP14.6□□□□□ -0.07
SCAMP4-207ENST00000472442 RMND1Q9NWS8 449 aa14.6□□□□□ -0.07
SCAMP4-207ENST00000472442 A0A1W2PQC6 194 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 POTEMA6NI47 508 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 MYO1FO00160 1098 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 OPA1O60313 960 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 PMS1P54277 932 aaKnown RBP14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 GRB10Q13322 594 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 MEA1Q16626 185 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 DALRD3Q5D0E6 543 aaKnown RBP14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 SYDE2Q5VT97 1194 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 FKBP1CQ5VVH2 108 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 BTNL9Q6UXG8 535 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 ZNF662Q6ZS27 426 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 MIGA2Q7L4E1 593 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 CREG2Q8IUH2 290 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 ZNF507Q8TCN5 953 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 RUFY1Q96T51 708 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 NUDT12Q9BQG2 462 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 POLD4Q9HCU8 107 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 SCAF8Q9UPN6 1271 aaKnown RBP14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 H7C1D1 291 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 NFKBIEO00221 500 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 KLK7P49862 253 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 MMGT1Q8N4V1 131 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 SH2D3CQ8N5H7 860 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 PRPF38AQ8NAV1 312 aaKnown RBP14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 SECISBP2LQ93073 1101 aaKnown RBP14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 PNMA5Q96PV4 448 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 CUEDC2Q9H467 287 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 LRWD1Q9UFC0 647 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 DDX25Q9UHL0 483 aaKnown RBP14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 ZBTB21Q9ULJ3 1066 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 FER1L6Q2WGJ9 1857 aa14.59□□□□□ -0.07
SCAMP4-207ENST00000472442 B4DLN1 442 aa14.58□□□□□ -0.07
SCAMP4-207ENST00000472442 H0YHG0 523 aa14.58□□□□□ -0.07
SCAMP4-207ENST00000472442 MYL1P05976 194 aa14.58□□□□□ -0.07
SCAMP4-207ENST00000472442 TRIM21P19474 475 aaKnown RBP14.58□□□□□ -0.07
SCAMP4-207ENST00000472442 ATP1A2P50993 1020 aa14.58□□□□□ -0.07
SCAMP4-207ENST00000472442 KCNB1Q14721 858 aa14.58□□□□□ -0.07
SCAMP4-207ENST00000472442 AMNQ9BXJ7 453 aa14.58□□□□□ -0.07
SCAMP4-207ENST00000472442 TRIM9Q9C026 710 aa14.58□□□□□ -0.07
SCAMP4-207ENST00000472442 TAOK3Q9H2K8 898 aa14.58□□□□□ -0.07
SCAMP4-207ENST00000472442 SMARCAL1Q9NZC9 954 aa14.58□□□□□ -0.07
SCAMP4-207ENST00000472442 SNX12Q9UMY4 172 aa14.58□□□□□ -0.07
SCAMP4-207ENST00000472442 TMX2Q9Y320 296 aa14.58□□□□□ -0.07
SCAMP4-207ENST00000472442 BRCA1P38398 1863 aaKnown RBP14.58□□□□□ -0.07
SCAMP4-207ENST00000472442 OPLAHO14841 1288 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 KIAA0754O94854 1291 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 RHOBTB3O94955 611 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 EGFRP00533 1210 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 USH1GQ495M9 461 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 KCTD16Q68DU8 428 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 PURBQ96QR8 312 aaKnown RBP14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 PSMB7Q99436 277 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 BLOC1S4Q9NUP1 217 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 ZNHIT6Q9NWK9 470 aaKnown RBP14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 SYNPO2Q9UMS6 1093 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 CHRM1P11229 460 aaPredicted RBP14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 SKOR1P84550 965 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 KIF5AQ12840 1032 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 IKQ13123 557 aaPredicted RBP14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 PDIA5Q14554 519 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 CIAPIN1Q6FI81 312 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 FAM83AQ86UY5 434 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 ADSSL1Q8N142 457 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 SPATA4Q8NEY3 305 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 CRYGNQ8WXF5 182 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 EEF2KMTQ96G04 330 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 ANO3Q9BYT9 981 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 MAGEF1Q9HAY2 307 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 PRR12Q9ULL5 1215 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 CAPN6Q9Y6Q1 641 aa14.58□□□□□ -0.08
SCAMP4-207ENST00000472442 TBC1D12O60347 775 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 HSF2BPO75031 334 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 EPHB4P54760 987 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 KRT26Q7Z3Y9 468 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 FBXO11Q86XK2 927 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 OTUD6BQ8N6M0 293 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 TRIM47Q96LD4 638 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms