RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 CNNM2Q9H8M5 875 aa11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 ALG13Q9NP73 1137 aaKnown RBP11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 PNMA6FA0A0J9YX94 578 aa11.66□□□□□ -0.54
SCAMP3-205ENST00000472397 E7EWF7 191 aa11.66□□□□□ -0.54
SCAMP3-205ENST00000472397 HIP1O00291 1037 aa11.66□□□□□ -0.54
SCAMP3-205ENST00000472397 PLEKHA8P1O95397 391 aa11.66□□□□□ -0.54
SCAMP3-205ENST00000472397 ANTXR2P58335 489 aa11.66□□□□□ -0.54
SCAMP3-205ENST00000472397 IRX6P78412 446 aaPredicted RBP11.66□□□□□ -0.54
SCAMP3-205ENST00000472397 TRDNQ13061 729 aa11.66□□□□□ -0.54
SCAMP3-205ENST00000472397 FIBCD1Q8N539 461 aa11.66□□□□□ -0.54
SCAMP3-205ENST00000472397 NEK9Q8TD19 979 aa11.66□□□□□ -0.54
SCAMP3-205ENST00000472397 IL17RAQ96F46 866 aa11.66□□□□□ -0.54
SCAMP3-205ENST00000472397 PGBD1Q96JS3 809 aa11.66□□□□□ -0.54
SCAMP3-205ENST00000472397 OSBPL3Q9H4L5 887 aa11.66□□□□□ -0.54
SCAMP3-205ENST00000472397 NSUN3Q9H649 340 aaKnown RBP11.66□□□□□ -0.54
SCAMP3-205ENST00000472397 PCDHGC5Q9Y5F6 944 aa11.66□□□□□ -0.54
SCAMP3-205ENST00000472397 ERICH2A1L162 156 aa11.65□□□□□ -0.54
SCAMP3-205ENST00000472397 PPFIA3O75145 1194 aa11.65□□□□□ -0.54
SCAMP3-205ENST00000472397 TCF7P36402 384 aaPredicted RBP11.65□□□□□ -0.54
SCAMP3-205ENST00000472397 LTBRP36941 435 aa11.65□□□□□ -0.54
SCAMP3-205ENST00000472397 GHRHRQ02643 423 aa11.65□□□□□ -0.54
SCAMP3-205ENST00000472397 HYAL1Q12794 435 aa11.65□□□□□ -0.54
SCAMP3-205ENST00000472397 LPIN1Q14693 890 aa11.65□□□□□ -0.54
SCAMP3-205ENST00000472397 GNPTABQ3T906 1256 aa11.65□□□□□ -0.54
SCAMP3-205ENST00000472397 METTL7BQ6UX53 244 aa11.65□□□□□ -0.54
SCAMP3-205ENST00000472397 RALYLQ86SE5 291 aaKnown RBP11.65□□□□□ -0.54
SCAMP3-205ENST00000472397 TRAPPC12Q8WVT3 735 aa11.65□□□□□ -0.54
SCAMP3-205ENST00000472397 PABPC5Q96DU9 382 aaKnown RBP11.65□□□□□ -0.54
SCAMP3-205ENST00000472397 LRRC2Q9BYS8 371 aa11.65□□□□□ -0.54
SCAMP3-205ENST00000472397 MUTYHQ9UIF7 546 aa11.65□□□□□ -0.54
SCAMP3-205ENST00000472397 GSTTP1A0A1W2PQM5 241 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 ENPP3O14638 875 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 FIBPO43427 364 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 TGFB3P10600 412 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 DNAJB1P25685 340 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 HOXC8P31273 242 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 CD52P31358 61 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 IRS1P35568 1242 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 ZP2Q05996 745 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 PPFIA1Q13136 1202 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 BTG3Q14201 252 aaPredicted RBP11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 NEDD9Q14511 834 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 TIGD5Q53EQ6 642 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 CATIPQ7Z7H3 387 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 RBM23Q86U06 439 aaKnown RBP11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 GLG1Q92896 1179 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 INPP4AQ96PE3 977 aaPredicted RBP11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 PPP1R16BQ96T49 567 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 USP26Q9BXU7 913 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 AGO3Q9H9G7 860 aaKnown RBP11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 CDY2AQ9Y6F7 541 aa11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 U3KPZ7 1027 aaPredicted RBP11.64□□□□□ -0.55
SCAMP3-205ENST00000472397 POTEB3A0JP26 581 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 PRR33A8MZF0 331 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 DCXO43602 365 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 GNAT1P11488 350 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 ICAM3P32942 547 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 BMPR1AP36894 532 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 RBM10P98175 930 aaKnown RBP11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 MGAT3Q09327 533 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 TROAPQ12815 778 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 GRIK4Q16099 956 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 TMEM266Q2M3C6 531 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 FAM26DQ5JW98 314 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 TTC22Q5TAA0 569 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 POTEBQ6S5H4 581 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 NFXL1Q6ZNB6 911 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 ADGRD2Q7Z7M1 963 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 RTN4RL1Q86UN2 441 aaPredicted RBP11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 SRBD1Q8N5C6 995 aaKnown RBP11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 NCOA7Q8NI08 942 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 LINC01599Q8WXQ3 324 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 CUL5Q93034 780 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 RRP36Q96EU6 259 aaKnown RBP11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 PHOX2BQ99453 314 aa11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 ZNF215Q9UL58 517 aaPredicted RBP11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 MRPL42Q9Y6G3 142 aaKnown RBP11.63□□□□□ -0.55
SCAMP3-205ENST00000472397 ADGRA3Q8IWK6 1321 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 NLRC5Q86WI3 1866 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 MEIS2O14770 477 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 MBTPS2O43462 519 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 TBX10O75333 385 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 LINC00271P0C7V0 271 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 ALADP13716 330 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 KCNA2P16389 499 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 ITGB5P18084 799 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 CHMLP26374 656 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 ADAM17P78536 824 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 MARCH8Q5T0T0 291 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 HFE2Q6ZVN8 426 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 TRMT1LQ7Z2T5 733 aaKnown RBP11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 NLRX1Q86UT6 975 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 TICAM2Q86XR7 235 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 ZNF654Q8IZM8 581 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 IGDCC4Q8TDY8 1250 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 FBXL18Q96ME1 805 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 SAMD11Q96NU1 681 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 APOL5Q9BWW9 433 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 MAF1Q9H063 256 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 MAP3K20Q9NYL2 800 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms