RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 SFSWAPQ12872 951 aaKnown RBP9.29□□□□□ -0.92
CD47-204ENST00000471694 FOXD4Q12950 439 aaPredicted RBP9.29□□□□□ -0.92
CD47-204ENST00000471694 RASGRF1Q13972 1273 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 HLFQ16534 295 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 ANGPTL8Q6UXH0 198 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 ARHGEF18Q6ZSZ5 1173 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 TBC1D2Q9BYX2 928 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 METTL14Q9HCE5 456 aaKnown RBP9.29□□□□□ -0.92
CD47-204ENST00000471694 FAM114A2Q9NRY5 505 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 NPM3O75607 178 aaKnown RBP9.29□□□□□ -0.92
CD47-204ENST00000471694 ACADMP11310 421 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 ADCY8P40145 1251 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 KPNA1P52294 538 aaPredicted RBP9.29□□□□□ -0.92
CD47-204ENST00000471694 PEX3P56589 373 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 MAGI2Q86UL8 1455 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 CRB1P82279 1406 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 CLIC2O15247 247 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 MOCS2O96007 188 aaPredicted RBP9.29□□□□□ -0.92
CD47-204ENST00000471694 CYP2E1P05181 493 aaPredicted RBP9.29□□□□□ -0.92
CD47-204ENST00000471694 RHOXF2BP0C7M4 288 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 UBE3CQ15386 1083 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 SWSAP1Q6NVH7 229 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 LCORLQ8N3X6 602 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 ZNF280CQ8ND82 737 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 RASGRP4Q8TDF6 673 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 TBCKQ8TEA7 893 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 RHOXF2Q9BQY4 288 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 ABCA8O94911 1581 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 SHANK2Q9UPX8 1470 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 GOLGA8IPA6NC78 632 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 GOLGA8JA6NMD2 632 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 CLDN3O15551 220 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 IRX4P78413 519 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 IRAK1BP1Q5VVH5 260 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 IFNLR1Q8IU57 520 aaPredicted RBP9.29□□□□□ -0.92
CD47-204ENST00000471694 SPON2Q9BUD6 331 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 C2orf40Q9H1Z8 148 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 TNNQ9UQP3 1299 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 BFSP2Q13515 415 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 RPS6KA1Q15418 735 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 UVSSAQ2YD98 709 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 SMIM5Q71RC9 77 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 ENGASEQ8NFI3 743 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 SCAF8Q9UPN6 1271 aaKnown RBP9.28□□□□□ -0.92
CD47-204ENST00000471694 FAM50BQ9Y247 325 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 SOS2Q07890 1332 aaPredicted RBP9.28□□□□□ -0.92
CD47-204ENST00000471694 DNAJC21Q5F1R6 531 aaKnown RBP9.28□□□□□ -0.92
CD47-204ENST00000471694 SAMD7Q7Z3H4 446 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 P3H4Q92791 437 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 BAG1Q99933 345 aaPredicted RBP9.28□□□□□ -0.92
CD47-204ENST00000471694 SP110Q9HB58 689 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 TJP2Q9UDY2 1190 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 PCDHB8Q9UN66 801 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 IPPQ9Y573 584 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 PLEKHG2Q9H7P9 1386 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 MAP3K1Q13233 1512 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 hCG_1984214I3L0E3 225 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 PRPF4O43172 522 aaKnown RBP eCLIP9.28□□□□□ -0.92
CD47-204ENST00000471694 APOEP02649 317 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 OCM2P0CE71 109 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 OCMP0CE72 109 aaPredicted RBP9.28□□□□□ -0.92
CD47-204ENST00000471694 VPS41P49754 854 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 FAM160A1Q05DH4 1040 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 ZNF667Q5HYK9 610 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 ANKRD13CQ8N6S4 541 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 ZNF713Q8N859 430 aaPredicted RBP9.28□□□□□ -0.92
CD47-204ENST00000471694 STN1Q9H668 368 aaKnown RBP9.28□□□□□ -0.92
CD47-204ENST00000471694 STARD7Q9NQZ5 370 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 SNX14Q9Y5W7 946 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 HECW2Q9P2P5 1572 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 AOX1Q06278 1338 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 TMEM247A6NEH6 219 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 PQBP1O60828 265 aaKnown RBP9.28□□□□□ -0.92
CD47-204ENST00000471694 TRPA1O75762 1119 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 LDHAP00338 332 aaKnown RBP9.28□□□□□ -0.92
CD47-204ENST00000471694 GCFC2P16383 781 aaKnown RBP9.28□□□□□ -0.92
CD47-204ENST00000471694 MAGEA1P43355 309 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 ZNF131P52739 623 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 PROSER3Q2NL68 480 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 STMN2Q93045 179 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 COG4Q9H9E3 785 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 SERTAD1Q9UHV2 236 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 DYNLT1P63172 113 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 TMEM62Q0P6H9 643 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 FAM26FQ5R3K3 315 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 THEMIS2Q5TEJ8 643 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 DNAJC24Q6P3W2 148 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 PHLDB2Q86SQ0 1253 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 TRIM48Q8IWZ4 208 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 STKLD1Q8NE28 680 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 TEKT4Q8WW24 435 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 HSPH1Q92598 858 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 PCDHA6Q9UN73 950 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 PCDHA8Q9Y5H6 950 aa9.28□□□□□ -0.92
CD47-204ENST00000471694 C19orf81C9J6K1 198 aa9.27□□□□□ -0.92
CD47-204ENST00000471694 PRKAB2O43741 272 aa9.27□□□□□ -0.92
CD47-204ENST00000471694 DDHD2O94830 711 aa9.27□□□□□ -0.92
CD47-204ENST00000471694 SNX17Q15036 470 aa9.27□□□□□ -0.92
CD47-204ENST00000471694 FEZ2Q9UHY8 353 aaPredicted RBP9.27□□□□□ -0.92
CD47-204ENST00000471694 TSR3Q9UJK0 312 aaKnown RBP9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms