RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 IGFBP4P22692 258 aa17.59■□□□□ 0.41
COL1A1-203ENST00000471344 RPS6KB1P23443 525 aa17.59■□□□□ 0.41
COL1A1-203ENST00000471344 MARK3P27448 753 aa17.59■□□□□ 0.41
COL1A1-203ENST00000471344 METAP2P50579 478 aaKnown RBP eCLIP17.59■□□□□ 0.41
COL1A1-203ENST00000471344 ADCY7P51828 1080 aa17.59■□□□□ 0.41
COL1A1-203ENST00000471344 FGD1P98174 961 aa17.59■□□□□ 0.41
COL1A1-203ENST00000471344 CCDC85BQ15834 202 aaPredicted RBP17.59■□□□□ 0.41
COL1A1-203ENST00000471344 PPP1R18Q6NYC8 613 aa17.59■□□□□ 0.41
COL1A1-203ENST00000471344 BLOC1S2Q6QNY1 142 aa17.59■□□□□ 0.41
COL1A1-203ENST00000471344 LMBR1Q8WVP7 490 aa17.59■□□□□ 0.41
COL1A1-203ENST00000471344 ANO3Q9BYT9 981 aa17.59■□□□□ 0.41
COL1A1-203ENST00000471344 JADE2Q9NQC1 790 aa17.59■□□□□ 0.41
COL1A1-203ENST00000471344 BARHL2Q9NY43 387 aa17.59■□□□□ 0.41
COL1A1-203ENST00000471344 NID2Q14112 1375 aa17.58■□□□□ 0.4
COL1A1-203ENST00000471344 SMCO2A6NFE2 343 aa17.58■□□□□ 0.4
COL1A1-203ENST00000471344 KCNJ6P48051 423 aa17.58■□□□□ 0.4
COL1A1-203ENST00000471344 ARHGAP4P98171 946 aa17.58■□□□□ 0.4
COL1A1-203ENST00000471344 PHOSPHO2Q8TCD6 241 aa17.58■□□□□ 0.4
COL1A1-203ENST00000471344 ZBTB10Q96DT7 871 aa17.58■□□□□ 0.4
COL1A1-203ENST00000471344 ZNF215Q9UL58 517 aaPredicted RBP17.58■□□□□ 0.4
COL1A1-203ENST00000471344 MICAL3Q7RTP6 2002 aa17.58■□□□□ 0.4
COL1A1-203ENST00000471344 MUC3AQ02505 3323 aa17.57■□□□□ 0.4
COL1A1-203ENST00000471344 RSPH10B2B2RC85 870 aa17.57■□□□□ 0.4
COL1A1-203ENST00000471344 RSPH10BP0C881 870 aa17.57■□□□□ 0.4
COL1A1-203ENST00000471344 ARP10275 920 aa17.57■□□□□ 0.4
COL1A1-203ENST00000471344 CLK2P49760 499 aaKnown RBP17.57■□□□□ 0.4
COL1A1-203ENST00000471344 RCAN1P53805 252 aa17.57■□□□□ 0.4
COL1A1-203ENST00000471344 ADAM17P78536 824 aa17.57■□□□□ 0.4
COL1A1-203ENST00000471344 TAP1Q03518 808 aa17.57■□□□□ 0.4
COL1A1-203ENST00000471344 FAM117BQ6P1L5 589 aa17.57■□□□□ 0.4
COL1A1-203ENST00000471344 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.57■□□□□ 0.4
COL1A1-203ENST00000471344 RUFY4Q6ZNE9 571 aa17.57■□□□□ 0.4
COL1A1-203ENST00000471344 PHKBQ93100 1093 aa17.57■□□□□ 0.4
COL1A1-203ENST00000471344 CDHR1Q96JP9 859 aa17.57■□□□□ 0.4
COL1A1-203ENST00000471344 UIMC1Q96RL1 719 aa17.57■□□□□ 0.4
COL1A1-203ENST00000471344 PCYT2Q99447 389 aa17.57■□□□□ 0.4
COL1A1-203ENST00000471344 MXRA8Q9BRK3 442 aa17.57■□□□□ 0.4
COL1A1-203ENST00000471344 KCNH7Q9NS40 1196 aa17.57■□□□□ 0.4
COL1A1-203ENST00000471344 TLL1O43897 1013 aa17.56■□□□□ 0.4
COL1A1-203ENST00000471344 LGR5O75473 907 aa17.56■□□□□ 0.4
COL1A1-203ENST00000471344 ITGB3BPQ13352 177 aaPredicted RBP17.56■□□□□ 0.4
COL1A1-203ENST00000471344 MKRN4PQ13434 485 aaPredicted RBP17.56■□□□□ 0.4
COL1A1-203ENST00000471344 PKN1Q16512 942 aa17.56■□□□□ 0.4
COL1A1-203ENST00000471344 PFKFB3Q16875 520 aaPredicted RBP17.56■□□□□ 0.4
COL1A1-203ENST00000471344 JAKMIP3Q5VZ66 844 aa17.56■□□□□ 0.4
COL1A1-203ENST00000471344 KRT40Q6A162 431 aa17.56■□□□□ 0.4
COL1A1-203ENST00000471344 MICALL1Q8N3F8 863 aa17.56■□□□□ 0.4
COL1A1-203ENST00000471344 GIMAP8Q8ND71 665 aaPredicted RBP17.56■□□□□ 0.4
COL1A1-203ENST00000471344 DBF4BQ8NFT6 615 aa17.56■□□□□ 0.4
COL1A1-203ENST00000471344 AGXT2Q9BYV1 514 aa17.56■□□□□ 0.4
COL1A1-203ENST00000471344 NCOA5Q9HCD5 579 aaKnown RBP17.56■□□□□ 0.4
COL1A1-203ENST00000471344 REC8O95072 547 aa17.55■□□□□ 0.4
COL1A1-203ENST00000471344 PARNO95453 639 aaKnown RBP17.55■□□□□ 0.4
COL1A1-203ENST00000471344 SCG2P13521 617 aa17.55■□□□□ 0.4
COL1A1-203ENST00000471344 SREBF1P36956 1147 aa17.55■□□□□ 0.4
COL1A1-203ENST00000471344 ARNTL2Q8WYA1 636 aa17.55■□□□□ 0.4
COL1A1-203ENST00000471344 SEPT1Q8WYJ6 367 aa17.55■□□□□ 0.4
COL1A1-203ENST00000471344 LARP6Q9BRS8 491 aaKnown RBP17.55■□□□□ 0.4
COL1A1-203ENST00000471344 EHMT1Q9H9B1 1298 aa17.55■□□□□ 0.4
COL1A1-203ENST00000471344 JPH1Q9HDC5 661 aaPredicted RBP17.55■□□□□ 0.4
COL1A1-203ENST00000471344 ABHD14A-ACY1A0A1B0GW23 586 aa17.54■□□□□ 0.4
COL1A1-203ENST00000471344 hCG_1984214I3L0E3 225 aa17.54■□□□□ 0.4
COL1A1-203ENST00000471344 NEFLP07196 543 aa17.54■□□□□ 0.4
COL1A1-203ENST00000471344 CCT2P78371 535 aaKnown RBP17.54■□□□□ 0.4
COL1A1-203ENST00000471344 PPFIA1Q13136 1202 aa17.54■□□□□ 0.4
COL1A1-203ENST00000471344 TOB2Q14106 344 aaPredicted RBP17.54■□□□□ 0.4
COL1A1-203ENST00000471344 NTRK3Q16288 839 aa17.54■□□□□ 0.4
COL1A1-203ENST00000471344 CEP55Q53EZ4 464 aa17.54■□□□□ 0.4
COL1A1-203ENST00000471344 PLEKHG4Q58EX7 1191 aa17.54■□□□□ 0.4
COL1A1-203ENST00000471344 MARCH8Q5T0T0 291 aa17.54■□□□□ 0.4
COL1A1-203ENST00000471344 ZNF713Q8N859 430 aaPredicted RBP17.54■□□□□ 0.4
COL1A1-203ENST00000471344 RASGRP4Q8TDF6 673 aa17.54■□□□□ 0.4
COL1A1-203ENST00000471344 GLG1Q92896 1179 aa17.54■□□□□ 0.4
COL1A1-203ENST00000471344 AGO4Q9HCK5 861 aaKnown RBP17.54■□□□□ 0.4
COL1A1-203ENST00000471344 SLC9A2Q9UBY0 812 aa17.54■□□□□ 0.4
COL1A1-203ENST00000471344 EMSYQ7Z589 1322 aa17.53■□□□□ 0.4
COL1A1-203ENST00000471344 FAM86B1E9PN63 330 aa17.53■□□□□ 0.4
COL1A1-203ENST00000471344 DDX39AO00148 427 aaKnown RBP17.53■□□□□ 0.4
COL1A1-203ENST00000471344 GJB5O95377 273 aa17.53■□□□□ 0.4
COL1A1-203ENST00000471344 FAM86B2P0C5J1 330 aa17.53■□□□□ 0.4
COL1A1-203ENST00000471344 ACTR2P61160 394 aa17.53■□□□□ 0.4
COL1A1-203ENST00000471344 IGBP1P78318 339 aa17.53■□□□□ 0.4
COL1A1-203ENST00000471344 AP3B2Q13367 1082 aa17.53■□□□□ 0.4
COL1A1-203ENST00000471344 IKBKEQ14164 716 aa17.53■□□□□ 0.4
COL1A1-203ENST00000471344 GRIK4Q16099 956 aa17.53■□□□□ 0.4
COL1A1-203ENST00000471344 FBXL16Q8N461 479 aa17.53■□□□□ 0.4
COL1A1-203ENST00000471344 ZBED2Q9BTP6 218 aa17.53■□□□□ 0.4
COL1A1-203ENST00000471344 ERAP1Q9NZ08 941 aa17.53■□□□□ 0.4
COL1A1-203ENST00000471344 KAT6AQ92794 2004 aa17.53■□□□□ 0.4
COL1A1-203ENST00000471344 PRRC2BQ5JSZ5 2229 aaKnown RBP17.52■□□□□ 0.4
COL1A1-203ENST00000471344 NRCAMQ92823 1304 aa17.52■□□□□ 0.4
COL1A1-203ENST00000471344 CCDC196A0A1B0GTZ2 297 aa17.52■□□□□ 0.4
COL1A1-203ENST00000471344 KIF28PB7ZC32 967 aa17.52■□□□□ 0.4
COL1A1-203ENST00000471344 MEIS1O00470 390 aa17.52■□□□□ 0.4
COL1A1-203ENST00000471344 CCNE2O96020 404 aa17.52■□□□□ 0.4
COL1A1-203ENST00000471344 FOSP01100 380 aaPredicted RBP17.52■□□□□ 0.4
COL1A1-203ENST00000471344 CHRNA1P02708 482 aa17.52■□□□□ 0.4
COL1A1-203ENST00000471344 GNAT1P11488 350 aa17.52■□□□□ 0.4
COL1A1-203ENST00000471344 PDIA3P30101 505 aaKnown RBP17.52■□□□□ 0.4
COL1A1-203ENST00000471344 TRAPPC12Q8WVT3 735 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms