RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 JPH1Q9HDC5 661 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-218ENST00000470942 SLC9A2Q9UBY0 812 aa17.88■□□□□ 0.45
HDAC6-218ENST00000470942 PFKMP08237 780 aa17.87■□□□□ 0.45
HDAC6-218ENST00000470942 SELPP16109 830 aa17.87■□□□□ 0.45
HDAC6-218ENST00000470942 NEK4P51957 841 aa17.87■□□□□ 0.45
HDAC6-218ENST00000470942 RASIP1Q5U651 963 aa17.87■□□□□ 0.45
HDAC6-218ENST00000470942 NIPA1Q7RTP0 329 aa17.87■□□□□ 0.45
HDAC6-218ENST00000470942 GLG1Q92896 1179 aa17.87■□□□□ 0.45
HDAC6-218ENST00000470942 FAM161BQ96MY7 647 aa17.87■□□□□ 0.45
HDAC6-218ENST00000470942 SETD4Q9NVD3 440 aa17.87■□□□□ 0.45
HDAC6-218ENST00000470942 CXXC1Q9P0U4 656 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-218ENST00000470942 NFASCO94856 1347 aa17.87■□□□□ 0.45
HDAC6-218ENST00000470942 TET1Q8NFU7 2136 aa17.86■□□□□ 0.45
HDAC6-218ENST00000470942 GRXCR1A8MXD5 290 aa17.86■□□□□ 0.45
HDAC6-218ENST00000470942 FAM86B1E9PN63 330 aa17.86■□□□□ 0.45
HDAC6-218ENST00000470942 DDX39AO00148 427 aaKnown RBP17.86■□□□□ 0.45
HDAC6-218ENST00000470942 FAM86B2P0C5J1 330 aa17.86■□□□□ 0.45
HDAC6-218ENST00000470942 GNAT1P11488 350 aa17.86■□□□□ 0.45
HDAC6-218ENST00000470942 CKBP12277 381 aa17.86■□□□□ 0.45
HDAC6-218ENST00000470942 ACTN1P12814 892 aa17.86■□□□□ 0.45
HDAC6-218ENST00000470942 ITGB3BPQ13352 177 aaPredicted RBP17.86■□□□□ 0.45
HDAC6-218ENST00000470942 FAM109BQ6ICB4 259 aaPredicted RBP17.86■□□□□ 0.45
HDAC6-218ENST00000470942 LRRC8DQ7L1W4 858 aa17.86■□□□□ 0.45
HDAC6-218ENST00000470942 CRYGNQ8WXF5 182 aa17.86■□□□□ 0.45
HDAC6-218ENST00000470942 VWCEQ96DN2 955 aa17.86■□□□□ 0.45
HDAC6-218ENST00000470942 IL17RAQ96F46 866 aa17.86■□□□□ 0.45
HDAC6-218ENST00000470942 AIFM3Q96NN9 605 aa17.86■□□□□ 0.45
HDAC6-218ENST00000470942 UIMC1Q96RL1 719 aa17.86■□□□□ 0.45
HDAC6-218ENST00000470942 SMARCAD1Q9H4L7 1026 aa17.86■□□□□ 0.45
HDAC6-218ENST00000470942 TREHO43280 583 aa17.85■□□□□ 0.45
HDAC6-218ENST00000470942 DTNBO60941 627 aa17.85■□□□□ 0.45
HDAC6-218ENST00000470942 MARK3P27448 753 aa17.85■□□□□ 0.45
HDAC6-218ENST00000470942 THPOP40225 353 aa17.85■□□□□ 0.45
HDAC6-218ENST00000470942 TRIM71Q2Q1W2 868 aaKnown RBP17.85■□□□□ 0.45
HDAC6-218ENST00000470942 SERINC5Q86VE9 423 aa17.85■□□□□ 0.45
HDAC6-218ENST00000470942 GBF1Q92538 1859 aa17.85■□□□□ 0.45
HDAC6-218ENST00000470942 WNT8BQ93098 351 aa17.85■□□□□ 0.45
HDAC6-218ENST00000470942 AZI2Q9H6S1 392 aa17.85■□□□□ 0.45
HDAC6-218ENST00000470942 MTMR10Q9NXD2 777 aa17.85■□□□□ 0.45
HDAC6-218ENST00000470942 ERAP1Q9NZ08 941 aa17.85■□□□□ 0.45
HDAC6-218ENST00000470942 PCDHA4Q9UN74 947 aa17.85■□□□□ 0.45
HDAC6-218ENST00000470942 SLC4A7Q9Y6M7 1214 aa17.85■□□□□ 0.45
HDAC6-218ENST00000470942 IGLV3-22A0A075B6J6 115 aa17.84■□□□□ 0.45
HDAC6-218ENST00000470942 ACTR2P61160 394 aa17.84■□□□□ 0.45
HDAC6-218ENST00000470942 RBL2Q08999 1139 aa17.84■□□□□ 0.45
HDAC6-218ENST00000470942 C8orf34Q49A92 452 aa17.84■□□□□ 0.45
HDAC6-218ENST00000470942 PRR16Q569H4 304 aa17.84■□□□□ 0.45
HDAC6-218ENST00000470942 ZNF618Q5T7W0 954 aa17.84■□□□□ 0.45
HDAC6-218ENST00000470942 BLIDQ8IZY5 108 aa17.84■□□□□ 0.45
HDAC6-218ENST00000470942 NECAB1Q8N987 351 aa17.84■□□□□ 0.45
HDAC6-218ENST00000470942 ZNF577Q9BSK1 485 aa17.84■□□□□ 0.45
HDAC6-218ENST00000470942 EMSYQ7Z589 1322 aa17.83■□□□□ 0.44
HDAC6-218ENST00000470942 NRCAMQ92823 1304 aa17.83■□□□□ 0.44
HDAC6-218ENST00000470942 STK36Q9NRP7 1315 aa17.83■□□□□ 0.44
HDAC6-218ENST00000470942 IPO5O00410 1097 aaKnown RBP17.83■□□□□ 0.44
HDAC6-218ENST00000470942 PARNO95453 639 aaKnown RBP17.83■□□□□ 0.44
HDAC6-218ENST00000470942 XBP1P17861 261 aa17.83■□□□□ 0.44
HDAC6-218ENST00000470942 DNAJB2P25686 324 aa17.83■□□□□ 0.44
HDAC6-218ENST00000470942 HOXC8P31273 242 aa17.83■□□□□ 0.44
HDAC6-218ENST00000470942 SETQ01105 290 aaPredicted RBP17.83■□□□□ 0.44
HDAC6-218ENST00000470942 PPFIA1Q13136 1202 aa17.83■□□□□ 0.44
HDAC6-218ENST00000470942 ME3Q16798 604 aa17.83■□□□□ 0.44
HDAC6-218ENST00000470942 GALNT17Q6IS24 598 aa17.83■□□□□ 0.44
HDAC6-218ENST00000470942 LMBR1Q8WVP7 490 aa17.83■□□□□ 0.44
HDAC6-218ENST00000470942 C22orf23Q9BZE7 217 aa17.83■□□□□ 0.44
HDAC6-218ENST00000470942 SEMA6BQ9H3T3 888 aa17.83■□□□□ 0.44
HDAC6-218ENST00000470942 KCNJ14Q9UNX9 436 aa17.83■□□□□ 0.44
HDAC6-218ENST00000470942 LGR5O75473 907 aa17.82■□□□□ 0.44
HDAC6-218ENST00000470942 LARGE1O95461 756 aa17.82■□□□□ 0.44
HDAC6-218ENST00000470942 CIITAP33076 1130 aa17.82■□□□□ 0.44
HDAC6-218ENST00000470942 PBX2P40425 430 aa17.82■□□□□ 0.44
HDAC6-218ENST00000470942 USP11P51784 963 aa17.82■□□□□ 0.44
HDAC6-218ENST00000470942 FAM177A1Q8N128 213 aaPredicted RBP17.82■□□□□ 0.44
HDAC6-218ENST00000470942 TBCKQ8TEA7 893 aa17.82■□□□□ 0.44
HDAC6-218ENST00000470942 PCYT2Q99447 389 aa17.82■□□□□ 0.44
HDAC6-218ENST00000470942 PBX4Q9BYU1 374 aa17.82■□□□□ 0.44
HDAC6-218ENST00000470942 TBC1D22BQ9NU19 505 aa17.82■□□□□ 0.44
HDAC6-218ENST00000470942 ORC3Q9UBD5 711 aaPredicted RBP17.82■□□□□ 0.44
HDAC6-218ENST00000470942 TCEAL9Q9UHQ7 104 aa17.82■□□□□ 0.44
HDAC6-218ENST00000470942 MSRAQ9UJ68 235 aa17.82■□□□□ 0.44
HDAC6-218ENST00000470942 MYH9P35579 1960 aaKnown RBP17.81■□□□□ 0.44
HDAC6-218ENST00000470942 RSPH10B2B2RC85 870 aa17.81■□□□□ 0.44
HDAC6-218ENST00000470942 BACH1O14867 736 aa17.81■□□□□ 0.44
HDAC6-218ENST00000470942 NBNO60934 754 aa17.81■□□□□ 0.44
HDAC6-218ENST00000470942 CTDNEP1O95476 244 aa17.81■□□□□ 0.44
HDAC6-218ENST00000470942 CCNE2O96020 404 aa17.81■□□□□ 0.44
HDAC6-218ENST00000470942 RSPH10BP0C881 870 aa17.81■□□□□ 0.44
HDAC6-218ENST00000470942 STAT5BP51692 787 aa17.81■□□□□ 0.44
HDAC6-218ENST00000470942 IGBP1P78318 339 aa17.81■□□□□ 0.44
HDAC6-218ENST00000470942 GPNMBQ14956 572 aa17.81■□□□□ 0.44
HDAC6-218ENST00000470942 GRIK4Q16099 956 aa17.81■□□□□ 0.44
HDAC6-218ENST00000470942 TRAF7Q6Q0C0 670 aa17.81■□□□□ 0.44
HDAC6-218ENST00000470942 DAGLBQ8NCG7 672 aa17.81■□□□□ 0.44
HDAC6-218ENST00000470942 WASF1Q92558 559 aa17.81■□□□□ 0.44
HDAC6-218ENST00000470942 GTF3C6Q969F1 213 aa17.81■□□□□ 0.44
HDAC6-218ENST00000470942 TIFAQ96CG3 184 aa17.81■□□□□ 0.44
HDAC6-218ENST00000470942 TTYH1Q9H313 450 aaPredicted RBP17.81■□□□□ 0.44
HDAC6-218ENST00000470942 TRPC6Q9Y210 931 aa17.81■□□□□ 0.44
HDAC6-218ENST00000470942 TMEM265A0A087WTH1 108 aa17.8■□□□□ 0.44
HDAC6-218ENST00000470942 DHX15O43143 795 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms