RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 RAD54LQ92698 747 aa16.95■□□□□ 0.3
COL4A5-203ENST00000470339 SMARCE1Q969G3 411 aa16.95■□□□□ 0.3
COL4A5-203ENST00000470339 MTRQ99707 1265 aa16.95■□□□□ 0.3
COL4A5-203ENST00000470339 C7orf25Q9BPX7 421 aa16.95■□□□□ 0.3
COL4A5-203ENST00000470339 KIAA1024Q9UPX6 916 aa16.95■□□□□ 0.3
COL4A5-203ENST00000470339 GOLGA6L3A6NEY3 463 aa16.94■□□□□ 0.3
COL4A5-203ENST00000470339 FOXN1O15353 648 aa16.94■□□□□ 0.3
COL4A5-203ENST00000470339 SLITRK3O94933 977 aa16.94■□□□□ 0.3
COL4A5-203ENST00000470339 NLRP12P59046 1061 aa16.94■□□□□ 0.3
COL4A5-203ENST00000470339 ECM1Q16610 540 aa16.94■□□□□ 0.3
COL4A5-203ENST00000470339 MORN1Q5T089 497 aa16.94■□□□□ 0.3
COL4A5-203ENST00000470339 MIER3Q7Z3K6 550 aa16.94■□□□□ 0.3
COL4A5-203ENST00000470339 DPP9Q86TI2 863 aa16.94■□□□□ 0.3
COL4A5-203ENST00000470339 SMAP1Q8IYB5 467 aaPredicted RBP16.94■□□□□ 0.3
COL4A5-203ENST00000470339 LRRC15Q8TF66 581 aa16.94■□□□□ 0.3
COL4A5-203ENST00000470339 PLIN2Q99541 437 aa16.94■□□□□ 0.3
COL4A5-203ENST00000470339 CFHR5Q9BXR6 569 aa16.94■□□□□ 0.3
COL4A5-203ENST00000470339 DNM3Q9UQ16 869 aa16.94■□□□□ 0.3
COL4A5-203ENST00000470339 MYH9P35579 1960 aaKnown RBP16.94■□□□□ 0.3
COL4A5-203ENST00000470339 POTEB3A0JP26 581 aa16.93■□□□□ 0.3
COL4A5-203ENST00000470339 WDR64B1ANS9 1081 aa16.93■□□□□ 0.3
COL4A5-203ENST00000470339 P4HBP07237 508 aaKnown RBP16.93■□□□□ 0.3
COL4A5-203ENST00000470339 HOXC6P09630 235 aa16.93■□□□□ 0.3
COL4A5-203ENST00000470339 GRM1Q13255 1194 aa16.93■□□□□ 0.3
COL4A5-203ENST00000470339 IRF5Q13568 498 aa16.93■□□□□ 0.3
COL4A5-203ENST00000470339 NEDD9Q14511 834 aa16.93■□□□□ 0.3
COL4A5-203ENST00000470339 POTEBQ6S5H4 581 aa16.93■□□□□ 0.3
COL4A5-203ENST00000470339 GRAMD1CQ8IYS0 662 aa16.93■□□□□ 0.3
COL4A5-203ENST00000470339 GTPBP4Q9BZE4 634 aaKnown RBP16.93■□□□□ 0.3
COL4A5-203ENST00000470339 VTA1Q9NP79 307 aa16.93■□□□□ 0.3
COL4A5-203ENST00000470339 RMND1Q9NWS8 449 aa16.93■□□□□ 0.3
COL4A5-203ENST00000470339 CHMP2AO43633 222 aa16.92■□□□□ 0.3
COL4A5-203ENST00000470339 AOC2O75106 756 aa16.92■□□□□ 0.3
COL4A5-203ENST00000470339 LYPLA2O95372 231 aa16.92■□□□□ 0.3
COL4A5-203ENST00000470339 PRR29P0C7W0 189 aa16.92■□□□□ 0.3
COL4A5-203ENST00000470339 XRCC6P12956 609 aaKnown RBP eCLIP16.92■□□□□ 0.3
COL4A5-203ENST00000470339 MAP2K5Q13163 448 aa16.92■□□□□ 0.3
COL4A5-203ENST00000470339 SEPT14Q6ZU15 432 aa16.92■□□□□ 0.3
COL4A5-203ENST00000470339 ARMCX2Q7L311 632 aa16.92■□□□□ 0.3
COL4A5-203ENST00000470339 USP6NLQ92738 828 aa16.92■□□□□ 0.3
COL4A5-203ENST00000470339 ERCC4Q92889 916 aaPredicted RBP16.92■□□□□ 0.3
COL4A5-203ENST00000470339 DYDC2Q96IM9 177 aa16.92■□□□□ 0.3
COL4A5-203ENST00000470339 MAML3Q96JK9 1138 aa16.92■□□□□ 0.3
COL4A5-203ENST00000470339 NACC1Q96RE7 527 aa16.92■□□□□ 0.3
COL4A5-203ENST00000470339 JPH1Q9HDC5 661 aaPredicted RBP16.92■□□□□ 0.3
COL4A5-203ENST00000470339 RGL1Q9NZL6 768 aa16.92■□□□□ 0.3
COL4A5-203ENST00000470339 PKD2L1Q9P0L9 805 aa16.92■□□□□ 0.3
COL4A5-203ENST00000470339 SLC9A2Q9UBY0 812 aa16.92■□□□□ 0.3
COL4A5-203ENST00000470339 PCDHA10Q9Y5I2 948 aa16.92■□□□□ 0.3
COL4A5-203ENST00000470339 SYNGAP1Q96PV0 1343 aa16.92■□□□□ 0.3
COL4A5-203ENST00000470339 RBM47A0AV96 593 aaKnown RBP16.91■□□□□ 0.3
COL4A5-203ENST00000470339 POTEFA5A3E0 1075 aa16.91■□□□□ 0.3
COL4A5-203ENST00000470339 DDX39AO00148 427 aaKnown RBP16.91■□□□□ 0.3
COL4A5-203ENST00000470339 DKC1O60832 514 aaKnown RBP eCLIP16.91■□□□□ 0.31e-5■■■■□ 25.7
COL4A5-203ENST00000470339 EYA4O95677 639 aa16.91■□□□□ 0.3
COL4A5-203ENST00000470339 CCNE2O96020 404 aa16.91■□□□□ 0.3
COL4A5-203ENST00000470339 PLA2G4BP0C869 781 aa16.91■□□□□ 0.3
COL4A5-203ENST00000470339 QARSP47897 775 aaKnown RBP16.91■□□□□ 0.3
COL4A5-203ENST00000470339 SP2Q02086 613 aa16.91■□□□□ 0.3
COL4A5-203ENST00000470339 CUL4BQ13620 913 aa16.91■□□□□ 0.3
COL4A5-203ENST00000470339 MORC3Q14149 939 aa16.91■□□□□ 0.3
COL4A5-203ENST00000470339 MCM6Q14566 821 aa16.91■□□□□ 0.3
COL4A5-203ENST00000470339 KCNB1Q14721 858 aa16.91■□□□□ 0.3
COL4A5-203ENST00000470339 CT47A1Q5JQC4 288 aaPredicted RBP16.91■□□□□ 0.3
COL4A5-203ENST00000470339 POTEGQ6S5H5 508 aa16.91■□□□□ 0.3
COL4A5-203ENST00000470339 KCNK18Q7Z418 384 aa16.91■□□□□ 0.3
COL4A5-203ENST00000470339 SYT2Q8N9I0 419 aaPredicted RBP16.91■□□□□ 0.3
COL4A5-203ENST00000470339 SOCS4Q8WXH5 440 aa16.91■□□□□ 0.3
COL4A5-203ENST00000470339 TRIM9Q9C026 710 aa16.91■□□□□ 0.3
COL4A5-203ENST00000470339 NAT10Q9H0A0 1025 aaKnown RBP16.91■□□□□ 0.3
COL4A5-203ENST00000470339 ZSWIM4Q9H7M6 989 aa16.91■□□□□ 0.3
COL4A5-203ENST00000470339 BMP2KQ9NSY1 1161 aaPredicted RBP16.91■□□□□ 0.3
COL4A5-203ENST00000470339 DDX41Q9UJV9 622 aaKnown RBP16.91■□□□□ 0.3
COL4A5-203ENST00000470339 MAN1B1Q9UKM7 699 aa16.91■□□□□ 0.3
COL4A5-203ENST00000470339 SAMM50Q9Y512 469 aa16.91■□□□□ 0.3
COL4A5-203ENST00000470339 PVALEFA0A1B0GWK0 134 aa16.9■□□□□ 0.3
COL4A5-203ENST00000470339 ATG7O95352 703 aa16.9■□□□□ 0.3
COL4A5-203ENST00000470339 RPN1P04843 607 aaKnown RBP16.9■□□□□ 0.3
COL4A5-203ENST00000470339 PSAPP07602 524 aa16.9■□□□□ 0.3
COL4A5-203ENST00000470339 MRE11P49959 708 aa16.9■□□□□ 0.3
COL4A5-203ENST00000470339 CYP4A11Q02928 519 aa16.9■□□□□ 0.3
COL4A5-203ENST00000470339 ANO6Q4KMQ2 910 aa16.9■□□□□ 0.3
COL4A5-203ENST00000470339 CCDC62Q6P9F0 684 aa16.9■□□□□ 0.3
COL4A5-203ENST00000470339 TPH2Q8IWU9 490 aa16.9■□□□□ 0.3
COL4A5-203ENST00000470339 MLKLQ8NB16 471 aa16.9■□□□□ 0.3
COL4A5-203ENST00000470339 SCFD2Q8WU76 684 aa16.9■□□□□ 0.3
COL4A5-203ENST00000470339 STAMQ92783 540 aa16.9■□□□□ 0.3
COL4A5-203ENST00000470339 CCDC47Q96A33 483 aaKnown RBP16.9■□□□□ 0.3
COL4A5-203ENST00000470339 BPIFA3Q9BQP9 254 aa16.9■□□□□ 0.3
COL4A5-203ENST00000470339 TINF2Q9BSI4 451 aa16.9■□□□□ 0.3
COL4A5-203ENST00000470339 RBSNQ9H1K0 784 aa16.9■□□□□ 0.3
COL4A5-203ENST00000470339 THSD7BQ9C0I4 1608 aa16.89■□□□□ 0.29
COL4A5-203ENST00000470339 E9PMD0 336 aa16.89■□□□□ 0.29
COL4A5-203ENST00000470339 UBA1P22314 1058 aaKnown RBP16.89■□□□□ 0.29
COL4A5-203ENST00000470339 RGS2P41220 211 aa16.89■□□□□ 0.29
COL4A5-203ENST00000470339 SLC12A3P55017 1021 aa16.89■□□□□ 0.29
COL4A5-203ENST00000470339 ACTR2P61160 394 aa16.89■□□□□ 0.29
COL4A5-203ENST00000470339 PSMC5P62195 406 aa16.89■□□□□ 0.29
COL4A5-203ENST00000470339 CTTNQ14247 550 aaKnown RBP16.89■□□□□ 0.29
COL4A5-203ENST00000470339 TTLL4Q14679 1199 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms