RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 USP26Q9BXU7 913 aa10.36□□□□□ -0.75
SYNGAP1-205ENST00000470232 RNPEPQ9H4A4 650 aa10.36□□□□□ -0.75
SYNGAP1-205ENST00000470232 ZBTB40Q9NUA8 1239 aa10.36□□□□□ -0.75
SYNGAP1-205ENST00000470232 MAP3K20Q9NYL2 800 aaKnown RBP10.36□□□□□ -0.75
SYNGAP1-205ENST00000470232 CLEC1BQ9P126 229 aa10.36□□□□□ -0.75
SYNGAP1-205ENST00000470232 USP15Q9Y4E8 981 aaPredicted RBP10.36□□□□□ -0.75
SYNGAP1-205ENST00000470232 SMARCA5O60264 1052 aaPredicted RBP10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 CSPG5O95196 566 aa10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 GGPS1O95749 300 aa10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 FGRP09769 529 aa10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 SMIM10L2AP0DMW4 78 aa10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 SMIM10L2BP0DMW5 78 aa10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 NRIP1P48552 1158 aa10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 HIC1Q14526 733 aa10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 HSDL1Q3SXM5 330 aa10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 FAM26DQ5JW98 314 aa10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 SPPL3Q8TCT6 385 aa10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 MICAL1Q8TDZ2 1067 aa10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 TBC1D5Q92609 795 aa10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 ZNF689Q96CS4 500 aaPredicted RBP10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 SEC62Q99442 399 aaKnown RBP10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 C16orf70Q9BSU1 422 aa10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 TLE6Q9H808 572 aa10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 PXMP2Q9NR77 195 aa10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 RIF1Q5UIP0 2472 aaKnown RBP10.35□□□□□ -0.75
SYNGAP1-205ENST00000470232 NOP56O00567 594 aaKnown RBP10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 ENPP3O14638 875 aa10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 CFBP00751 764 aa10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 STAG3L1P0CL83 205 aa10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 SNHG28P0DPA3 235 aa10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 MYCLP12524 364 aaPredicted RBP10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 HOXC8P31273 242 aa10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 CDC37Q16543 378 aaPredicted RBP10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 ZMYM1Q5SVZ6 1142 aa10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 RBM23Q86U06 439 aaKnown RBP10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 UBALD2Q8IYN6 164 aa10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 SAMD3Q8N6K7 520 aa10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 POF1BQ8WVV4 589 aa10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 NEK1Q96PY6 1258 aa10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 CDCA3Q99618 268 aaPredicted RBP10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 UBA5Q9GZZ9 404 aa10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 ZNF215Q9UL58 517 aaPredicted RBP10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 NR2E1Q9Y466 385 aa10.34□□□□□ -0.75
SYNGAP1-205ENST00000470232 CCDC171Q6TFL3 1326 aa10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 FAM186AA6NE01 2351 aa10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 SORBS3O60504 671 aa10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 DGKIO75912 1065 aa10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 ITGB1P05556 798 aa10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 LINC00271P0C7V0 271 aa10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 PCP11498 1178 aaKnown RBP10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 CAMK1Q14012 370 aa10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 ALX1Q15699 326 aa10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 CCDC178Q5BJE1 867 aa10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 PDE12Q6L8Q7 609 aaKnown RBP10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 CMTR2Q8IYT2 770 aaKnown RBP10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 ADSSL1Q8N142 457 aa10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 RC3H2Q9HBD1 1191 aaKnown RBP10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 AAASQ9NRG9 546 aa10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 SETD4Q9NVD3 440 aa10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 COL20A1Q9P218 1284 aa10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 BARX2Q9UMQ3 279 aaPredicted RBP10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 TTC41PQ6P2S7 1318 aa10.33□□□□□ -0.76
SYNGAP1-205ENST00000470232 PLXNA3P51805 1871 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 DCHS1Q96JQ0 3298 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 VPS13AQ96RL7 3174 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 DHX16O60231 1041 aaKnown RBP10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 LGALS2P05162 132 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 RPLP2P05387 115 aaKnown RBP10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 GOLGA8HP0CJ92 632 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 CCND2P30279 289 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 ARHGAP4P98171 946 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 UBE3AQ05086 875 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 MTMR3Q13615 1198 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 NEDD9Q14511 834 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 GNPTABQ3T906 1256 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 TAF2Q6P1X5 1199 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 MFSD6Q6ZSS7 791 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 ADGRD2Q7Z7M1 963 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 VSIG10LQ86VR7 867 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 ADGRF4Q8IZF3 695 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 KLHL23Q8NBE8 558 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 SUSD6Q92537 303 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 PDCD2LQ9BRP1 358 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 FTHL17Q9BXU8 183 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 MFSD1Q9H3U5 465 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 RWDD1Q9H446 243 aaPredicted RBP10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 PCDHB12Q9Y5F1 795 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 KAT6AQ92794 2004 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 NRCAMQ92823 1304 aa10.32□□□□□ -0.76
SYNGAP1-205ENST00000470232 ATG2AQ2TAZ0 1938 aa10.31□□□□□ -0.76
SYNGAP1-205ENST00000470232 GABBR2O75899 941 aa10.31□□□□□ -0.76
SYNGAP1-205ENST00000470232 CHRNA1P02708 482 aa10.31□□□□□ -0.76
SYNGAP1-205ENST00000470232 GHRP10912 638 aa10.31□□□□□ -0.76
SYNGAP1-205ENST00000470232 UBA1P22314 1058 aaKnown RBP10.31□□□□□ -0.76
SYNGAP1-205ENST00000470232 DNAJB1P25685 340 aa10.31□□□□□ -0.76
SYNGAP1-205ENST00000470232 NT5C2P49902 561 aa10.31□□□□□ -0.76
SYNGAP1-205ENST00000470232 CLCN6P51797 869 aa10.31□□□□□ -0.76
SYNGAP1-205ENST00000470232 SP2Q02086 613 aa10.31□□□□□ -0.76
SYNGAP1-205ENST00000470232 TRAF1Q13077 416 aa10.31□□□□□ -0.76
SYNGAP1-205ENST00000470232 SPOUT1Q5T280 376 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms