RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 MFSD10Q14728 455 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 TMEM63BQ5T3F8 832 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 FAM160B1Q5W0V3 765 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 MIS18BP1Q6P0N0 1132 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 PLPPR4Q7Z2D5 763 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 FAM126BQ8IXS8 530 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 C7orf61Q8IZ16 206 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 CCDC155Q8N6L0 562 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 C7orf31Q8N865 590 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 OXER1Q8TDS5 423 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 SLC5A5Q92911 643 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 ZFP91Q96JP5 570 aaPredicted RBP9.68□□□□□ -0.86
SSBP1-208ENST00000469123 C16orf70Q9BSU1 422 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 TEKT3Q9BXF9 490 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 TUT1Q9H6E5 874 aaKnown RBP9.68□□□□□ -0.86
SSBP1-208ENST00000469123 WDR81Q562E7 1941 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 NRCAMQ92823 1304 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 KIAA0355O15063 1070 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 MSH4O15457 936 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 DHX15O43143 795 aaKnown RBP9.67□□□□□ -0.86
SSBP1-208ENST00000469123 MARCH6O60337 910 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 DKC1O60832 514 aaKnown RBP eCLIP9.67□□□□□ -0.86
SSBP1-208ENST00000469123 PARNO95453 639 aaKnown RBP9.67□□□□□ -0.86
SSBP1-208ENST00000469123 CD4P01730 458 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 PSAPP07602 524 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 HSP90AA1P07900 732 aaKnown RBP9.67□□□□□ -0.86
SSBP1-208ENST00000469123 ZNF286BP0CG31 522 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 TCF7P36402 384 aaPredicted RBP9.67□□□□□ -0.86
SSBP1-208ENST00000469123 ACTR2P61160 394 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 TLE2Q04725 743 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 ITGB3BPQ13352 177 aaPredicted RBP9.67□□□□□ -0.86
SSBP1-208ENST00000469123 KIAA0753Q2KHM9 967 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 NBPF20Q3BBV1 942 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 RILPL1Q5EBL4 403 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 LRCH2Q5VUJ6 765 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 LARP1BQ659C4 914 aaKnown RBP9.67□□□□□ -0.86
SSBP1-208ENST00000469123 BRAPQ7Z569 592 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 ETNPPLQ8TBG4 499 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 AFAP1L1Q8TED9 768 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 KAT2BQ92831 832 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 GLG1Q92896 1179 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 GTF2IRD1Q9UHL9 959 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 PCDHA10Q9Y5I2 948 aa9.67□□□□□ -0.86
SSBP1-208ENST00000469123 IGKV6D-21A0A0A0MT36 114 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 GSTTP1A0A1W2PQM5 241 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 RRN3P2A6NIE6 340 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 LAD1O00515 517 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 PITPNM1O00562 1244 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 ADAMTS3O15072 1205 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 NEMFO60524 1076 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 CAND2O75155 1236 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 PSMD10O75832 226 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 TDP2O95551 362 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 BMP15O95972 392 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 KCNA4P22459 653 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 PTGS1P23219 599 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 HOXC8P31273 242 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 STAT5BP51692 787 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 IRX5P78411 483 aaPredicted RBP9.66□□□□□ -0.86
SSBP1-208ENST00000469123 SP4Q02446 784 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 PPP2R5CQ13362 524 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 BFSP2Q13515 415 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 CALCRLQ16602 461 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 CAGE1Q8TC20 777 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 ATP6V0A1Q93050 837 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 FAM167AQ96KS9 214 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 LBHD1Q9BQE6 289 aaPredicted RBP9.66□□□□□ -0.86
SSBP1-208ENST00000469123 KCNMB3Q9NPA1 279 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 PDLIM7Q9NR12 457 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 GJB4Q9NTQ9 266 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 TMEM39AQ9NV64 488 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 PKD2L1Q9P0L9 805 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 TBX21Q9UL17 535 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 NOD1Q9Y239 953 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 SAMM50Q9Y512 469 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 STK24Q9Y6E0 443 aa9.66□□□□□ -0.86
SSBP1-208ENST00000469123 TRIP12Q14669 1992 aaPredicted RBP9.66□□□□□ -0.86
SSBP1-208ENST00000469123 COL1A2P08123 1366 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 GRIN2DO15399 1336 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 A0A1W2PPC1 479 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 C17orf102A2RUQ5 167 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 BACH1O14867 736 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 SLC37A4O43826 429 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 EDIL3O43854 480 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 TIMP1P01033 207 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 RAG1P15918 1043 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 FOSBP53539 338 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 PSMC6P62333 389 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 GUCY1B3Q02153 619 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 RBL2Q08999 1139 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 FAAP100Q0VG06 881 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 PTK7Q13308 1070 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 BECN1Q14457 450 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 FAM47CQ5HY64 1035 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 MCTP1Q6DN14 999 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 TAF2Q6P1X5 1199 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 ABHD15Q6UXT9 468 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 FAM43BQ6ZT52 329 aaPredicted RBP9.65□□□□□ -0.86
SSBP1-208ENST00000469123 ZNF710Q8N1W2 664 aa9.65□□□□□ -0.86
SSBP1-208ENST00000469123 NEK9Q8TD19 979 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms