RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 CCDC103Q8IW40 242 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 KBTBD2Q8IY47 623 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 KLHL36Q8N4N3 616 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 ARRDC4Q8NCT1 418 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 RCBTB1Q8NDN9 531 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 RNPC3Q96LT9 517 aaKnown RBP6.14□□□□□ -1.43
SCFD1-205ENST00000469043 LGR4Q9BXB1 951 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 BARX1Q9HBU1 254 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-205ENST00000469043 ZDHHC9Q9Y397 364 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 PCDHA2Q9Y5H9 948 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 TCRBV5S2A0A599 114 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 B4GALT4O60513 344 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 FZD7O75084 574 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 TADA3O75528 432 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 ITGAVP06756 1048 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 EPHB4P54760 987 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 IRX6P78412 446 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-205ENST00000469043 PLEKHG4Q58EX7 1191 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 PKN3Q6P5Z2 889 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 TRMT10BQ6PF06 316 aaKnown RBP6.13□□□□□ -1.43
SCFD1-205ENST00000469043 CCAR1Q8IX12 1150 aaKnown RBP6.13□□□□□ -1.43
SCFD1-205ENST00000469043 PPIL6Q8IXY8 311 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 CCDC146Q8IYE0 955 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 IGDCC4Q8TDY8 1250 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 STAG1Q8WVM7 1258 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 PMM1Q92871 262 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 MBD6Q96DN6 1003 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 SRPK1Q96SB4 655 aaKnown RBP6.13□□□□□ -1.43
SCFD1-205ENST00000469043 SLKQ9H2G2 1235 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-205ENST00000469043 CLDND1Q9NY35 253 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 PRKAB1Q9Y478 270 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 TCAF1Q9Y4C2 921 aa6.13□□□□□ -1.43
SCFD1-205ENST00000469043 ARNTLO00327 626 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 GPR42O15529 346 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 EIF3JO75822 258 aaKnown RBP6.12□□□□□ -1.43
SCFD1-205ENST00000469043 NFATC3Q12968 1075 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 CDSNQ15517 529 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 TESK1Q15569 626 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 EMC4Q5J8M3 183 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 SLFN13Q68D06 897 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 KRTAP5-3Q6L8H2 238 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 CRIP3Q6Q6R5 217 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 FMNL3Q8IVF7 1028 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 KREMEN2Q8NCW0 462 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 PHOSPHO1Q8TCT1 267 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 MRIQ9BWK5 157 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 SCAND2PQ9GZW5 306 aaPredicted RBP6.12□□□□□ -1.43
SCFD1-205ENST00000469043 VPS11Q9H270 941 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 SEMA4AQ9H3S1 761 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 SMOC1Q9H4F8 434 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 EPB41L1Q9H4G0 881 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 CD248Q9HCU0 757 aa6.12□□□□□ -1.43
SCFD1-205ENST00000469043 LRG1P02750 347 aa6.11□□□□□ -1.43
SCFD1-205ENST00000469043 SSBP05455 408 aaKnown RBP eCLIP6.11□□□□□ -1.43
SCFD1-205ENST00000469043 ZNF585AQ6P3V2 769 aa6.11□□□□□ -1.43
SCFD1-205ENST00000469043 ZNF227Q86WZ6 799 aa6.11□□□□□ -1.43
SCFD1-205ENST00000469043 TRIM48Q8IWZ4 208 aa6.11□□□□□ -1.43
SCFD1-205ENST00000469043 FAM178BQ8IXR5 827 aa6.11□□□□□ -1.43
SCFD1-205ENST00000469043 DNERQ8NFT8 737 aa6.11□□□□□ -1.43
SCFD1-205ENST00000469043 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.11□□□□□ -1.43
SCFD1-205ENST00000469043 CCDC136Q96JN2 1154 aa6.11□□□□□ -1.43
SCFD1-205ENST00000469043 SIRPGQ9P1W8 387 aa6.11□□□□□ -1.43
SCFD1-205ENST00000469043 MYOTQ9UBF9 498 aa6.11□□□□□ -1.43
SCFD1-205ENST00000469043 KRIT1O00522 736 aa6.1□□□□□ -1.43
SCFD1-205ENST00000469043 TBX1O43435 398 aa6.1□□□□□ -1.43
SCFD1-205ENST00000469043 AMHP03971 560 aa6.1□□□□□ -1.43
SCFD1-205ENST00000469043 PDGFRBP09619 1106 aa6.1□□□□□ -1.43
SCFD1-205ENST00000469043 ACVRL1P37023 503 aa6.1□□□□□ -1.43
SCFD1-205ENST00000469043 AMPD3Q01432 767 aa6.1□□□□□ -1.43
SCFD1-205ENST00000469043 PRSS53Q2L4Q9 553 aa6.1□□□□□ -1.43
SCFD1-205ENST00000469043 TNNI3KQ59H18 835 aa6.1□□□□□ -1.43
SCFD1-205ENST00000469043 LARP1BQ659C4 914 aaKnown RBP6.1□□□□□ -1.43
SCFD1-205ENST00000469043 C6orf15Q6UXA7 325 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-205ENST00000469043 TMC5Q6UXY8 1006 aa6.1□□□□□ -1.43
SCFD1-205ENST00000469043 PALM2Q8IXS6 379 aa6.1□□□□□ -1.43
SCFD1-205ENST00000469043 JDP2Q8WYK2 163 aa6.1□□□□□ -1.43
SCFD1-205ENST00000469043 ZCCHC14Q8WYQ9 949 aaKnown RBP6.1□□□□□ -1.43
SCFD1-205ENST00000469043 ZNF747Q9BV97 191 aa6.1□□□□□ -1.43
SCFD1-205ENST00000469043 ACTR10Q9NZ32 417 aa6.1□□□□□ -1.43
SCFD1-205ENST00000469043 HSPBP1Q9NZL4 362 aa6.1□□□□□ -1.43
SCFD1-205ENST00000469043 FBXL7Q9UJT9 491 aa6.1□□□□□ -1.43
SCFD1-205ENST00000469043 LCP1P13796 627 aa6.09□□□□□ -1.43
SCFD1-205ENST00000469043 SELENOPP49908 381 aa6.09□□□□□ -1.43
SCFD1-205ENST00000469043 GFRA1P56159 465 aa6.09□□□□□ -1.43
SCFD1-205ENST00000469043 TBX4P57082 545 aa6.09□□□□□ -1.43
SCFD1-205ENST00000469043 SF1Q15637 639 aaKnown RBP6.09□□□□□ -1.43
SCFD1-205ENST00000469043 CYP4F22Q6NT55 531 aa6.09□□□□□ -1.43
SCFD1-205ENST00000469043 APBB1IPQ7Z5R6 666 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-205ENST00000469043 ZFPM1Q8IX07 1006 aa6.09□□□□□ -1.43
SCFD1-205ENST00000469043 Q8N1X5 172 aa6.09□□□□□ -1.43
SCFD1-205ENST00000469043 TRIM55Q9BYV6 548 aa6.09□□□□□ -1.43
SCFD1-205ENST00000469043 TMX1Q9H3N1 280 aa6.09□□□□□ -1.43
SCFD1-205ENST00000469043 ZNF408Q9H9D4 720 aa6.09□□□□□ -1.43
SCFD1-205ENST00000469043 PATE3B3GLJ2 98 aa6.08□□□□□ -1.44
SCFD1-205ENST00000469043 SMAD7O15105 426 aaKnown RBP6.08□□□□□ -1.44
SCFD1-205ENST00000469043 MUSKO15146 869 aa6.08□□□□□ -1.44
SCFD1-205ENST00000469043 CREB3O43889 395 aa6.08□□□□□ -1.44
SCFD1-205ENST00000469043 SUSD5O60279 629 aa6.08□□□□□ -1.44
SCFD1-205ENST00000469043 ZNF623O75123 536 aa6.08□□□□□ -1.44
SCFD1-205ENST00000469043 CDC45O75419 566 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms