RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 NGRNQ9NPE2 291 aaKnown RBP7.91□□□□□ -1.14
XRN1-207ENST00000468894 RBPJLQ9UBG7 517 aa7.91□□□□□ -1.14
XRN1-207ENST00000468894 ACOT7O00154 380 aa7.9□□□□□ -1.14
XRN1-207ENST00000468894 FFAR3O14843 346 aa7.9□□□□□ -1.14
XRN1-207ENST00000468894 GLRX3O76003 335 aaKnown RBP7.9□□□□□ -1.14
XRN1-207ENST00000468894 NPTXRO95502 500 aa7.9□□□□□ -1.14
XRN1-207ENST00000468894 SMAD4Q13485 552 aaKnown RBP7.9□□□□□ -1.14
XRN1-207ENST00000468894 PLEKHG4Q58EX7 1191 aa7.9□□□□□ -1.14
XRN1-207ENST00000468894 TCERG1LQ5VWI1 586 aa7.9□□□□□ -1.14
XRN1-207ENST00000468894 HHIPL2Q6UWX4 724 aa7.9□□□□□ -1.14
XRN1-207ENST00000468894 SAPCD2Q86UD0 394 aa7.9□□□□□ -1.14
XRN1-207ENST00000468894 STK32CQ86UX6 486 aa7.9□□□□□ -1.14
XRN1-207ENST00000468894 NOSTRINQ8IVI9 506 aa7.9□□□□□ -1.14
XRN1-207ENST00000468894 TMEM151BQ8IW70 566 aa7.9□□□□□ -1.14
XRN1-207ENST00000468894 ZSCAN18Q8TBC5 510 aaPredicted RBP7.9□□□□□ -1.14
XRN1-207ENST00000468894 NINJ1Q92982 152 aa7.9□□□□□ -1.14
XRN1-207ENST00000468894 ZBTB8AQ96BR9 441 aa7.9□□□□□ -1.14
XRN1-207ENST00000468894 PCDH18Q9HCL0 1135 aa7.9□□□□□ -1.14
XRN1-207ENST00000468894 MAGEC2Q9UBF1 373 aaPredicted RBP7.9□□□□□ -1.14
XRN1-207ENST00000468894 ATP23Q9Y6H3 246 aa7.9□□□□□ -1.14
XRN1-207ENST00000468894 FAM83GA6ND36 823 aa7.89□□□□□ -1.15
XRN1-207ENST00000468894 FAM90A27PA6NNH2 459 aa7.89□□□□□ -1.15
XRN1-207ENST00000468894 B4E1Z4 1266 aa7.89□□□□□ -1.15
XRN1-207ENST00000468894 PTPN1P18031 435 aaKnown RBP7.89□□□□□ -1.15
XRN1-207ENST00000468894 ADAM9Q13443 819 aa7.89□□□□□ -1.15
XRN1-207ENST00000468894 VMACQ2NL98 169 aa7.89□□□□□ -1.15
XRN1-207ENST00000468894 DALRD3Q5D0E6 543 aaKnown RBP7.89□□□□□ -1.15
XRN1-207ENST00000468894 SDE2Q6IQ49 451 aa7.89□□□□□ -1.15
XRN1-207ENST00000468894 LIPIQ6XZB0 460 aa7.89□□□□□ -1.15
XRN1-207ENST00000468894 NLGN4XQ8N0W4 816 aa7.89□□□□□ -1.15
XRN1-207ENST00000468894 TP53I13Q8NBR0 393 aaPredicted RBP7.89□□□□□ -1.15
XRN1-207ENST00000468894 INTS7Q9NVH2 962 aaKnown RBP7.89□□□□□ -1.15
XRN1-207ENST00000468894 SPATA6Q9NWH7 488 aaPredicted RBP7.89□□□□□ -1.15
XRN1-207ENST00000468894 SAMD15Q9P1V8 674 aa7.89□□□□□ -1.15
XRN1-207ENST00000468894 M0R2C6 588 aa7.88□□□□□ -1.15
XRN1-207ENST00000468894 ZSCAN22P10073 491 aaPredicted RBP7.88□□□□□ -1.15
XRN1-207ENST00000468894 THBS2P35442 1172 aa7.88□□□□□ -1.15
XRN1-207ENST00000468894 MECP2P51608 486 aaKnown RBP7.88□□□□□ -1.15
XRN1-207ENST00000468894 SEC23AQ15436 765 aa7.88□□□□□ -1.15
XRN1-207ENST00000468894 TM4SF20Q53R12 229 aa7.88□□□□□ -1.15
XRN1-207ENST00000468894 TMC5Q6UXY8 1006 aa7.88□□□□□ -1.15
XRN1-207ENST00000468894 DDX53Q86TM3 631 aaKnown RBP7.88□□□□□ -1.15
XRN1-207ENST00000468894 NIM1KQ8IY84 436 aa7.88□□□□□ -1.15
XRN1-207ENST00000468894 ADGRG2Q8IZP9 1017 aa7.88□□□□□ -1.15
XRN1-207ENST00000468894 KYQ8NBH2 561 aa7.88□□□□□ -1.15
XRN1-207ENST00000468894 ZNF526Q8TF50 670 aaPredicted RBP7.88□□□□□ -1.15
XRN1-207ENST00000468894 ZSWIM3Q96MP5 696 aa7.88□□□□□ -1.15
XRN1-207ENST00000468894 PLAAQ9Y263 795 aa7.88□□□□□ -1.15
XRN1-207ENST00000468894 A0A1B0GTL3 188 aa7.87□□□□□ -1.15
XRN1-207ENST00000468894 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.87□□□□□ -1.15
XRN1-207ENST00000468894 CLASP2O75122 1294 aaKnown RBP7.87□□□□□ -1.15
XRN1-207ENST00000468894 JMJD7P0C870 316 aa7.87□□□□□ -1.15
XRN1-207ENST00000468894 GJA4P35212 333 aa7.87□□□□□ -1.15
XRN1-207ENST00000468894 RTP5Q14D33 572 aa7.87□□□□□ -1.15
XRN1-207ENST00000468894 LCE3BQ5TA77 95 aa7.87□□□□□ -1.15
XRN1-207ENST00000468894 BTBD8Q5XKL5 378 aa7.87□□□□□ -1.15
XRN1-207ENST00000468894 CD276Q5ZPR3 534 aa7.87□□□□□ -1.15
XRN1-207ENST00000468894 CPZQ66K79 652 aa7.87□□□□□ -1.15
XRN1-207ENST00000468894 DHX37Q8IY37 1157 aaKnown RBP7.87□□□□□ -1.15
XRN1-207ENST00000468894 RIC8BQ9NVN3 520 aa7.87□□□□□ -1.15
XRN1-207ENST00000468894 SH3D21A4FU49 640 aa7.86□□□□□ -1.15
XRN1-207ENST00000468894 C4BPAP04003 597 aaKnown RBP7.86□□□□□ -1.15
XRN1-207ENST00000468894 PIK3R6Q5UE93 754 aa7.86□□□□□ -1.15
XRN1-207ENST00000468894 CDCA2Q69YH5 1023 aaPredicted RBP7.86□□□□□ -1.15
XRN1-207ENST00000468894 TTLL6Q8N841 843 aa7.86□□□□□ -1.15
XRN1-207ENST00000468894 LINC01356Q8N9X3 169 aa7.86□□□□□ -1.15
XRN1-207ENST00000468894 CHST14Q8NCH0 376 aa7.86□□□□□ -1.15
XRN1-207ENST00000468894 MFSD3Q96ES6 412 aa7.86□□□□□ -1.15
XRN1-207ENST00000468894 TMEM209Q96SK2 561 aa7.86□□□□□ -1.15
XRN1-207ENST00000468894 SLC12A8A0AV02 714 aa7.85□□□□□ -1.15
XRN1-207ENST00000468894 SCDO00767 359 aa7.85□□□□□ -1.15
XRN1-207ENST00000468894 KRTAP19-4Q3LI73 84 aa7.85□□□□□ -1.15
XRN1-207ENST00000468894 PRR31Q5SQ13 230 aa7.85□□□□□ -1.15
XRN1-207ENST00000468894 VASNQ6EMK4 673 aa7.85□□□□□ -1.15
XRN1-207ENST00000468894 SPOCD1Q6ZMY3 1216 aa7.85□□□□□ -1.15
XRN1-207ENST00000468894 OTOP1Q7RTM1 612 aa7.85□□□□□ -1.15
XRN1-207ENST00000468894 LRRTM3Q86VH5 581 aa7.85□□□□□ -1.15
XRN1-207ENST00000468894 C2orf69Q8N8R5 385 aa7.85□□□□□ -1.15
XRN1-207ENST00000468894 DTX3Q8N9I9 347 aa7.85□□□□□ -1.15
XRN1-207ENST00000468894 PRAMEF25A6NGN4 478 aa7.84□□□□□ -1.15
XRN1-207ENST00000468894 CBX4O00257 560 aa7.84□□□□□ -1.15
XRN1-207ENST00000468894 TRAF5O00463 557 aa7.84□□□□□ -1.15
XRN1-207ENST00000468894 SMARCA5O60264 1052 aaPredicted RBP7.84□□□□□ -1.15
XRN1-207ENST00000468894 TRIM13O60858 407 aa7.84□□□□□ -1.15
XRN1-207ENST00000468894 HSD3B2P26439 372 aa7.84□□□□□ -1.15
XRN1-207ENST00000468894 FLT3P36888 993 aa7.84□□□□□ -1.15
XRN1-207ENST00000468894 DBPQ10586 325 aaPredicted RBP7.84□□□□□ -1.15
XRN1-207ENST00000468894 EP400NLQ6ZTU2 488 aa7.84□□□□□ -1.15
XRN1-207ENST00000468894 SIAH1Q8IUQ4 282 aa7.84□□□□□ -1.15
XRN1-207ENST00000468894 TARS2Q9BW92 718 aaKnown RBP7.84□□□□□ -1.15
XRN1-207ENST00000468894 BOCQ9BWV1 1114 aa7.84□□□□□ -1.15
XRN1-207ENST00000468894 DLL4Q9NR61 685 aa7.84□□□□□ -1.15
XRN1-207ENST00000468894 ZNF839A8K0R7 811 aa7.83□□□□□ -1.16
XRN1-207ENST00000468894 KPNA6O60684 536 aa7.83□□□□□ -1.16
XRN1-207ENST00000468894 ZBTB48P10074 688 aaPredicted RBP7.83□□□□□ -1.16
XRN1-207ENST00000468894 POU3F2P20265 443 aaPredicted RBP7.83□□□□□ -1.16
XRN1-207ENST00000468894 IRF9Q00978 393 aa7.83□□□□□ -1.16
XRN1-207ENST00000468894 SKIDA1Q1XH10 827 aa7.83□□□□□ -1.16
XRN1-207ENST00000468894 CFAP100Q494V2 611 aa7.83□□□□□ -1.16
XRN1-207ENST00000468894 PHF19Q5T6S3 580 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms