RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 DIS3L2Q8IYB7 885 aaKnown RBP16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 OXER1Q8TDS5 423 aa16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 TNPO1Q92973 898 aaKnown RBP16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 LENG9Q96B70 501 aa16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 MBOAT7Q96N66 472 aa16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 RIT2Q99578 217 aa16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 PRO3102Q9H379 93 aa16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 AZI2Q9H6S1 392 aa16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 TRMT13Q9NUP7 481 aaKnown RBP16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 ERAP1Q9NZ08 941 aa16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 GTF2IRD1Q9UHL9 959 aa16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 NOD1Q9Y239 953 aa16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 EMSYQ7Z589 1322 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 LTBP2Q14767 1821 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 DHX15O43143 795 aaKnown RBP16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 EDIL3O43854 480 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 LGR5O75473 907 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 ATG7O95352 703 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 GNAT1P11488 350 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 ACTR2P61160 394 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 MDM2Q00987 491 aaPredicted RBP16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 KRT76Q01546 638 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 PTGISQ16647 500 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 UTP14CQ5TAP6 766 aaKnown RBP16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 ZNF746Q6NUN9 644 aaPredicted RBP16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 PIK3AP1Q6ZUJ8 805 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 CCDC155Q8N6L0 562 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 FBXO18Q8NFZ0 1043 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 GLG1Q92896 1179 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 BADQ92934 168 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 TNFRSF25Q93038 417 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 UBE2OQ9C0C9 1292 aaKnown RBP16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 HIPK3Q9H422 1215 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 HDAC6Q9UBN7 1215 aa16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 COLQQ9Y215 455 aaPredicted RBP16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.76■□□□□ 0.27
TMEM39A-205ENST00000468676 BTBD18B2RXH4 712 aa16.75■□□□□ 0.27
TMEM39A-205ENST00000468676 MSH4O15457 936 aa16.75■□□□□ 0.27
TMEM39A-205ENST00000468676 SLC26A2P50443 739 aa16.75■□□□□ 0.27
TMEM39A-205ENST00000468676 NR5A1Q13285 461 aa16.75■□□□□ 0.27
TMEM39A-205ENST00000468676 LETM2Q2VYF4 491 aa16.75■□□□□ 0.27
TMEM39A-205ENST00000468676 GDF6Q6KF10 455 aaPredicted RBP16.75■□□□□ 0.27
TMEM39A-205ENST00000468676 MFSD5Q6N075 450 aa16.75■□□□□ 0.27
TMEM39A-205ENST00000468676 PLPPR4Q7Z2D5 763 aa16.75■□□□□ 0.27
TMEM39A-205ENST00000468676 SMAP1Q8IYB5 467 aaPredicted RBP16.75■□□□□ 0.27
TMEM39A-205ENST00000468676 TMEM199Q8N511 208 aa16.75■□□□□ 0.27
TMEM39A-205ENST00000468676 SLC5A5Q92911 643 aa16.75■□□□□ 0.27
TMEM39A-205ENST00000468676 NOC4LQ9BVI4 516 aaKnown RBP16.75■□□□□ 0.27
TMEM39A-205ENST00000468676 FOXP1Q9H334 677 aaPredicted RBP16.75■□□□□ 0.27
TMEM39A-205ENST00000468676 DDX25Q9UHL0 483 aaKnown RBP16.75■□□□□ 0.27
TMEM39A-205ENST00000468676 PITPNM1O00562 1244 aa16.74■□□□□ 0.27
TMEM39A-205ENST00000468676 TDP2O95551 362 aa16.74■□□□□ 0.27
TMEM39A-205ENST00000468676 SMIM10L2AP0DMW4 78 aa16.74■□□□□ 0.27
TMEM39A-205ENST00000468676 SMIM10L2BP0DMW5 78 aa16.74■□□□□ 0.27
TMEM39A-205ENST00000468676 FOSBP53539 338 aa16.74■□□□□ 0.27
TMEM39A-205ENST00000468676 FPGSQ05932 587 aa16.74■□□□□ 0.27
TMEM39A-205ENST00000468676 BFSP2Q13515 415 aa16.74■□□□□ 0.27
TMEM39A-205ENST00000468676 FAM160B1Q5W0V3 765 aa16.74■□□□□ 0.27
TMEM39A-205ENST00000468676 MIS18BP1Q6P0N0 1132 aa16.74■□□□□ 0.27
TMEM39A-205ENST00000468676 TRIM50Q86XT4 487 aa16.74■□□□□ 0.27
TMEM39A-205ENST00000468676 FAM20AQ96MK3 541 aa16.74■□□□□ 0.27
TMEM39A-205ENST00000468676 TELO2Q9Y4R8 837 aa16.74■□□□□ 0.27
TMEM39A-205ENST00000468676 RANBP2P49792 3224 aaKnown RBP16.74■□□□□ 0.27
TMEM39A-205ENST00000468676 TRIOBPQ9H2D6 2365 aa16.74■□□□□ 0.27
TMEM39A-205ENST00000468676 NRCAMQ92823 1304 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 MYH9P35579 1960 aaKnown RBP16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 TRIP12Q14669 1992 aaPredicted RBP16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 IGKV6D-21A0A0A0MT36 114 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 C17orf102A2RUQ5 167 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 DDX39AO00148 427 aaKnown RBP16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 TBX3O15119 743 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 CCNT1O60563 726 aaKnown RBP16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 GAS7O60861 476 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 CCNE2O96020 404 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 PSAPP07602 524 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 CYP2C9P11712 490 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 ITGB8P26012 769 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 HOXC8P31273 242 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 STAT5BP51692 787 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 GUCY1B3Q02153 619 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 PTK7Q13308 1070 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 PPIGQ13427 754 aaKnown RBP eCLIP16.73■□□□□ 0.271e-6■□□□□ 8.7
TMEM39A-205ENST00000468676 LRCH2Q5VUJ6 765 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 ABHD15Q6UXT9 468 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 RETREG2Q8NC44 543 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 CAGE1Q8TC20 777 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 TEKT3Q9BXF9 490 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 PPP1R12CQ9BZL4 782 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 SMC3Q9UQE7 1217 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 PCDHA10Q9Y5I2 948 aa16.73■□□□□ 0.27
TMEM39A-205ENST00000468676 WDR64B1ANS9 1081 aa16.72■□□□□ 0.27
TMEM39A-205ENST00000468676 BACH1O14867 736 aa16.72■□□□□ 0.27
TMEM39A-205ENST00000468676 PSMD10O75832 226 aa16.72■□□□□ 0.27
TMEM39A-205ENST00000468676 SFNP31947 248 aa16.72■□□□□ 0.27
TMEM39A-205ENST00000468676 CYP2C18P33260 490 aa16.72■□□□□ 0.27
TMEM39A-205ENST00000468676 JAK3P52333 1124 aa16.72■□□□□ 0.27
TMEM39A-205ENST00000468676 GNL2Q13823 731 aaKnown RBP16.72■□□□□ 0.27
TMEM39A-205ENST00000468676 RDM1Q8NG50 284 aa16.72■□□□□ 0.27
TMEM39A-205ENST00000468676 ETNPPLQ8TBG4 499 aa16.72■□□□□ 0.27
TMEM39A-205ENST00000468676 AFAP1L1Q8TED9 768 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms