RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 PHF20Q9BVI0 1012 aa4.03□□□□□ -1.76
TRIM59-202ENST00000468542 SLC26A6Q9BXS9 759 aa4.03□□□□□ -1.76
TRIM59-202ENST00000468542 SEZ6LQ9BYH1 1024 aa4.03□□□□□ -1.76
TRIM59-202ENST00000468542 KATNBL1Q9H079 304 aa4.03□□□□□ -1.76
TRIM59-202ENST00000468542 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.03□□□□□ -1.76
TRIM59-202ENST00000468542 NCOA5Q9HCD5 579 aaKnown RBP4.03□□□□□ -1.76
TRIM59-202ENST00000468542 PXMP2Q9NR77 195 aa4.03□□□□□ -1.76
TRIM59-202ENST00000468542 FLRT1Q9NZU1 646 aa4.03□□□□□ -1.76
TRIM59-202ENST00000468542 COL20A1Q9P218 1284 aa4.03□□□□□ -1.76
TRIM59-202ENST00000468542 DDX20Q9UHI6 824 aaKnown RBP4.03□□□□□ -1.76
TRIM59-202ENST00000468542 OGDHLQ9ULD0 1010 aa4.03□□□□□ -1.76
TRIM59-202ENST00000468542 FAM184BQ9ULE4 1060 aa4.03□□□□□ -1.76
TRIM59-202ENST00000468542 NAP1L2Q9ULW6 460 aaPredicted RBP4.03□□□□□ -1.76
TRIM59-202ENST00000468542 PCDHA4Q9UN74 947 aa4.03□□□□□ -1.76
TRIM59-202ENST00000468542 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.03□□□□□ -1.76
TRIM59-202ENST00000468542 SMCO2A6NFE2 343 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 MOXD2PA6NHM9 499 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 K7ELQ4 463 aaPredicted RBP4.02□□□□□ -1.77
TRIM59-202ENST00000468542 DNM1LO00429 736 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 HOXA2O43364 376 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 FIBPO43427 364 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 LARGE1O95461 756 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 SGPL1O95470 568 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 MMP1P03956 469 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 RARBP10826 455 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 HOXD8P13378 290 aaPredicted RBP4.02□□□□□ -1.77
TRIM59-202ENST00000468542 CCL5P13501 91 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 GCFC2P16383 781 aaKnown RBP4.02□□□□□ -1.77
TRIM59-202ENST00000468542 JUNDP17535 347 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 CCND2P30279 289 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 HOXA13P31271 388 aaPredicted RBP4.02□□□□□ -1.77
TRIM59-202ENST00000468542 CIITAP33076 1130 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 CYP2C19P33261 490 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 TRAPPC10P48553 1259 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 USP11P51784 963 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 NLRP5P59047 1200 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 SETQ01105 290 aaPredicted RBP4.02□□□□□ -1.77
TRIM59-202ENST00000468542 PDE4DQ08499 809 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 ST3GAL1Q11201 340 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 STK3Q13188 491 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 ORC2Q13416 577 aaPredicted RBP4.02□□□□□ -1.77
TRIM59-202ENST00000468542 TRIM29Q14134 588 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 TTLL4Q14679 1199 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 PGM5Q15124 567 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 NPY5RQ15761 445 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 DUSP28Q4G0W2 176 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 CEP55Q53EZ4 464 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 C1orf53Q5VUE5 145 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 ARHGEF16Q5VV41 709 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 TAPT1Q6NXT6 567 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 CCDC62Q6P9F0 684 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 KRT25Q7Z3Z0 450 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 RAB11FIP4Q86YS3 637 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 ARRDC4Q8NCT1 418 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 FBXO18Q8NFZ0 1043 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 SH3TC2Q8TF17 1288 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 U2AF1L4Q8WU68 220 aaKnown RBP4.02□□□□□ -1.77
TRIM59-202ENST00000468542 GPKOWQ92917 476 aaPredicted RBP eCLIP4.02□□□□□ -1.77
TRIM59-202ENST00000468542 TSEN34Q9BSV6 310 aaKnown RBP4.02□□□□□ -1.77
TRIM59-202ENST00000468542 ALG1Q9BT22 464 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 RNF208Q9H0X6 261 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 UPF3AQ9H1J1 476 aaKnown RBP4.02□□□□□ -1.77
TRIM59-202ENST00000468542 FOXP1Q9H334 677 aaPredicted RBP4.02□□□□□ -1.77
TRIM59-202ENST00000468542 BRMS1Q9HCU9 246 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 ORC3Q9UBD5 711 aaPredicted RBP4.02□□□□□ -1.77
TRIM59-202ENST00000468542 BIN2Q9UBW5 565 aaPredicted RBP4.02□□□□□ -1.77
TRIM59-202ENST00000468542 GNEQ9Y223 722 aaKnown RBP4.02□□□□□ -1.77
TRIM59-202ENST00000468542 DOCK5Q9H7D0 1870 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 LTBP2Q14767 1821 aa4.02□□□□□ -1.77
TRIM59-202ENST00000468542 MYH9P35579 1960 aaKnown RBP4.02□□□□□ -1.77
TRIM59-202ENST00000468542 MYH15Q9Y2K3 1946 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 CYP3A7-CYP3A51PA0A087WV96 503 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 hCG_1642624A0A1W2PR95 340 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 A6NJR5 290 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 SPATA31C2B4DYI2 1134 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 MEIS1O00470 390 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 TBX3O15119 743 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 KPNA6O60684 536 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 ADAMTS4O75173 837 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 CABYRO75952 493 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 ITGB5P18084 799 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 EIF2AK2P19525 551 aaKnown RBP4.01□□□□□ -1.77
TRIM59-202ENST00000468542 CYP3A7P24462 503 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 U2AF2P26368 475 aaKnown RBP eCLIP4.01□□□□□ -1.77
TRIM59-202ENST00000468542 CPT1AP50416 773 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 GJA9P57773 515 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 MRPS9P82933 396 aaKnown RBP4.01□□□□□ -1.77
TRIM59-202ENST00000468542 ARHGAP4P98171 946 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 TNFAIP2Q03169 654 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 MTMR1Q13613 665 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 LAMC2Q13753 1193 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 NEDD9Q14511 834 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 NONOQ15233 471 aaKnown RBP eCLIP4.01□□□□□ -1.77
TRIM59-202ENST00000468542 SAFBQ15424 915 aaKnown RBP eCLIP4.01□□□□□ -1.77
TRIM59-202ENST00000468542 CCDC144BQ3MJ40 725 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 BRDTQ58F21 947 aaPredicted RBP4.01□□□□□ -1.77
TRIM59-202ENST00000468542 PPP4R3AQ6IN85 833 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 CCSAPQ6IQ19 270 aaPredicted RBP4.01□□□□□ -1.77
TRIM59-202ENST00000468542 USP17L6PQ6QN14 398 aa4.01□□□□□ -1.77
TRIM59-202ENST00000468542 METTL7BQ6UX53 244 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms