RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 PPP1R18Q6NYC8 613 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 CUL5Q93034 780 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 MS4A14Q96JA4 679 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 UIMC1Q96RL1 719 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 FGFBP2Q9BYJ0 223 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 NUCKS1Q9H1E3 243 aaKnown RBP17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 RBM12Q9NTZ6 932 aaKnown RBP17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 E9PMD0 336 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 RBAK-RBAKDNI3L0D1 243 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 PSEN1P49768 467 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 EPHB4P54760 987 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 APOBEC3HQ6NTF7 200 aaKnown RBP17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 C8orf74Q6P047 294 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 ARHGAP27Q6ZUM4 889 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 KIAA0825Q8IV33 1275 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 IGKV6D-41A0A0C4DH26 115 aa17.39■□□□□ 0.37
TSPAN4-211ENST00000468468 TTLL1O95922 423 aa17.39■□□□□ 0.37
TSPAN4-211ENST00000468468 SLC16A2P36021 539 aa17.39■□□□□ 0.37
TSPAN4-211ENST00000468468 MRPL12P52815 198 aaKnown RBP17.39■□□□□ 0.37
TSPAN4-211ENST00000468468 TEKT1Q969V4 418 aa17.39■□□□□ 0.37
TSPAN4-211ENST00000468468 CACNB3P54284 484 aa17.39■□□□□ 0.37
TSPAN4-211ENST00000468468 CFAP221Q4G0U5 840 aa17.39■□□□□ 0.37
TSPAN4-211ENST00000468468 HOMEZQ8IX15 550 aa17.39■□□□□ 0.37
TSPAN4-211ENST00000468468 CCDC65Q8IXS2 484 aa17.39■□□□□ 0.37
TSPAN4-211ENST00000468468 SYN2Q92777 582 aaPredicted RBP17.39■□□□□ 0.37
TSPAN4-211ENST00000468468 CEP63Q96MT8 703 aa17.39■□□□□ 0.37
TSPAN4-211ENST00000468468 NT5C3AQ9H0P0 336 aa17.39■□□□□ 0.37
TSPAN4-211ENST00000468468 KANSL2Q9H9L4 492 aa17.39■□□□□ 0.37
TSPAN4-211ENST00000468468 TSKSQ9UJT2 592 aa17.39■□□□□ 0.37
TSPAN4-211ENST00000468468 KIAA1024Q9UPX6 916 aa17.39■□□□□ 0.37
TSPAN4-211ENST00000468468 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.39■□□□□ 0.37
TSPAN4-211ENST00000468468 FOCADQ5VW36 1801 aa17.38■□□□□ 0.37
TSPAN4-211ENST00000468468 H0YIN7 160 aa17.38■□□□□ 0.37
TSPAN4-211ENST00000468468 APBA1Q02410 837 aa17.38■□□□□ 0.37
TSPAN4-211ENST00000468468 CACNB1Q02641 598 aaPredicted RBP17.38■□□□□ 0.37
TSPAN4-211ENST00000468468 ZFPM1Q8IX07 1006 aa17.38■□□□□ 0.37
TSPAN4-211ENST00000468468 SERPINB13Q9UIV8 391 aa17.38■□□□□ 0.37
TSPAN4-211ENST00000468468 NPHP3-ACAD11A0A0J9YXS1 232 aa17.38■□□□□ 0.37
TSPAN4-211ENST00000468468 PALMO75781 387 aa17.38■□□□□ 0.37
TSPAN4-211ENST00000468468 CRKP46108 304 aa17.38■□□□□ 0.37
TSPAN4-211ENST00000468468 SKIDA1Q1XH10 827 aa17.38■□□□□ 0.37
TSPAN4-211ENST00000468468 ICE2Q659A1 982 aa17.38■□□□□ 0.37
TSPAN4-211ENST00000468468 EMBQ6PCB8 327 aa17.38■□□□□ 0.37
TSPAN4-211ENST00000468468 TSEN2Q8NCE0 465 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-211ENST00000468468 PSTPIP2Q9H939 334 aa17.38■□□□□ 0.37
TSPAN4-211ENST00000468468 LUC7LQ9NQ29 371 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-211ENST00000468468 KDM3AQ9Y4C1 1321 aa17.38■□□□□ 0.37
TSPAN4-211ENST00000468468 USP17L10C9JJH3 530 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 GNA14O95837 355 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 PLA2G4BP0C869 781 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 GCFC2P16383 781 aaKnown RBP17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 DNA2P51530 1060 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 ARID5AQ03989 594 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 RAPGEF1Q13905 1077 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 HERC4Q5GLZ8 1057 aaPredicted RBP17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 HYIQ5T013 277 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 EP400NLQ6ZTU2 488 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 TRIM59Q8IWR1 403 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 TBC1D5Q92609 795 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 GOLGA8KD6RF30 607 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 OPA1O60313 960 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 SHOX2O60902 331 aaPredicted RBP17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 NAB2Q15742 525 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 ENOX2Q16206 610 aaKnown RBP17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 GLE1Q53GS7 698 aaKnown RBP17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 HHIPL2Q6UWX4 724 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 KCTD1Q719H9 257 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 PODNQ7Z5L7 613 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 GPBP1Q86WP2 473 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 PCDHA2Q9Y5H9 948 aa17.37■□□□□ 0.37
TSPAN4-211ENST00000468468 QSER1Q2KHR3 1735 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 ZBTB5O15062 677 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 FTCDO95954 541 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 KLRC1P26715 233 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 SH3GL2Q99962 352 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 RNF14Q9UBS8 474 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 POTEB3A0JP26 581 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 POTECB2RU33 542 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 HSF2BPO75031 334 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 TNFRSF8P28908 595 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 SHMT1P34896 483 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 TCP10Q12799 353 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 PPFIA1Q13136 1202 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 ALS2CLQ60I27 953 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 POTEBQ6S5H4 581 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 CAVIN3Q969G5 261 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 RUFY1Q96T51 708 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 EMILIN3Q9NT22 766 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 SLX4Q8IY92 1834 aa17.36■□□□□ 0.37
TSPAN4-211ENST00000468468 FAM196BA6NMK8 535 aa17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 ECE2O60344 883 aa17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 IRAK1P51617 712 aa17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 EN1Q05925 392 aaPredicted RBP17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 ADAM9Q13443 819 aa17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 SLC18A3Q16572 532 aa17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 SCFD1Q8WVM8 642 aa17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 ZHX3Q9H4I2 956 aa17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 A0A087X0T9 212 aa17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 ANKRD65E5RJM6 399 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms