RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 EVCP57679 992 aa21.8■■□□□ 1.08
COL7A1-207ENST00000467985 AKAP17AQ02040 695 aaKnown RBP21.8■■□□□ 1.08
COL7A1-207ENST00000467985 GPNMBQ14956 572 aa21.8■■□□□ 1.08
COL7A1-207ENST00000467985 PPP2R2DQ66LE6 453 aa21.8■■□□□ 1.08
COL7A1-207ENST00000467985 RUFY3Q7L099 469 aa21.8■■□□□ 1.08
COL7A1-207ENST00000467985 TRIM50Q86XT4 487 aa21.8■■□□□ 1.08
COL7A1-207ENST00000467985 KCNH7Q9NS40 1196 aa21.8■■□□□ 1.08
COL7A1-207ENST00000467985 NRCAMQ92823 1304 aa21.8■■□□□ 1.08
COL7A1-207ENST00000467985 ABHD14A-ACY1A0A1B0GW23 586 aa21.79■■□□□ 1.08
COL7A1-207ENST00000467985 ESYT2A0FGR8 921 aa21.79■■□□□ 1.08
COL7A1-207ENST00000467985 RSPH10B2B2RC85 870 aa21.79■■□□□ 1.08
COL7A1-207ENST00000467985 RSPH10BP0C881 870 aa21.79■■□□□ 1.08
COL7A1-207ENST00000467985 SREBF1P36956 1147 aa21.79■■□□□ 1.08
COL7A1-207ENST00000467985 CLK2P49760 499 aaKnown RBP21.79■■□□□ 1.08
COL7A1-207ENST00000467985 CEP55Q53EZ4 464 aa21.79■■□□□ 1.08
COL7A1-207ENST00000467985 TRAF7Q6Q0C0 670 aa21.79■■□□□ 1.08
COL7A1-207ENST00000467985 HERC6Q8IVU3 1022 aa21.79■■□□□ 1.08
COL7A1-207ENST00000467985 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.79■■□□□ 1.08
COL7A1-207ENST00000467985 WNT8BQ93098 351 aa21.79■■□□□ 1.08
COL7A1-207ENST00000467985 PRDM12Q9H4Q4 367 aa21.79■■□□□ 1.08
COL7A1-207ENST00000467985 ZSWIM6Q9HCJ5 1215 aa21.79■■□□□ 1.08
COL7A1-207ENST00000467985 C6orf50Q9HD87 102 aa21.79■■□□□ 1.08
COL7A1-207ENST00000467985 JPH1Q9HDC5 661 aaPredicted RBP21.79■■□□□ 1.08
COL7A1-207ENST00000467985 SETD4Q9NVD3 440 aa21.79■■□□□ 1.08
COL7A1-207ENST00000467985 ERAP1Q9NZ08 941 aa21.79■■□□□ 1.08
COL7A1-207ENST00000467985 CYP46A1Q9Y6A2 500 aa21.79■■□□□ 1.08
COL7A1-207ENST00000467985 TREHO43280 583 aa21.78■■□□□ 1.08
COL7A1-207ENST00000467985 IKBKEQ14164 716 aa21.78■■□□□ 1.08
COL7A1-207ENST00000467985 NIPA1Q7RTP0 329 aa21.78■■□□□ 1.08
COL7A1-207ENST00000467985 SDF4Q9BRK5 362 aa21.78■■□□□ 1.08
COL7A1-207ENST00000467985 TM6SF1Q9BZW5 370 aa21.78■■□□□ 1.08
COL7A1-207ENST00000467985 ZMYND12Q9H0C1 365 aa21.78■■□□□ 1.08
COL7A1-207ENST00000467985 SMARCAD1Q9H4L7 1026 aa21.78■■□□□ 1.08
COL7A1-207ENST00000467985 PKD2L1Q9P0L9 805 aa21.78■■□□□ 1.08
COL7A1-207ENST00000467985 MYO9BQ13459 2157 aa21.78■■□□□ 1.08
COL7A1-207ENST00000467985 NFASCO94856 1347 aa21.78■■□□□ 1.08
COL7A1-207ENST00000467985 GSTTP1A0A1W2PQM5 241 aa21.77■■□□□ 1.08
COL7A1-207ENST00000467985 MEIS1O00470 390 aa21.77■■□□□ 1.08
COL7A1-207ENST00000467985 GNA11P29992 359 aa21.77■■□□□ 1.08
COL7A1-207ENST00000467985 WDR5P61964 334 aaKnown RBP21.77■■□□□ 1.08
COL7A1-207ENST00000467985 ARHGAP4P98171 946 aa21.77■■□□□ 1.08
COL7A1-207ENST00000467985 LMBR1Q8WVP7 490 aa21.77■■□□□ 1.08
COL7A1-207ENST00000467985 GLG1Q92896 1179 aa21.77■■□□□ 1.08
COL7A1-207ENST00000467985 TNPO1Q92973 898 aaKnown RBP21.77■■□□□ 1.08
COL7A1-207ENST00000467985 RNF26Q9BY78 433 aaPredicted RBP21.77■■□□□ 1.08
COL7A1-207ENST00000467985 TMEM260Q9NX78 707 aa21.77■■□□□ 1.08
COL7A1-207ENST00000467985 SLC9A2Q9UBY0 812 aa21.77■■□□□ 1.08
COL7A1-207ENST00000467985 TELO2Q9Y4R8 837 aa21.77■■□□□ 1.08
COL7A1-207ENST00000467985 VCANP13611 3396 aa21.76■■□□□ 1.07
COL7A1-207ENST00000467985 LGR5O75473 907 aa21.76■■□□□ 1.07
COL7A1-207ENST00000467985 MYOGP15173 224 aa21.76■■□□□ 1.07
COL7A1-207ENST00000467985 IFNAR1P17181 557 aa21.76■■□□□ 1.07
COL7A1-207ENST00000467985 PDIA3P30101 505 aaKnown RBP21.76■■□□□ 1.07
COL7A1-207ENST00000467985 ZNF76P36508 570 aa21.76■■□□□ 1.07
COL7A1-207ENST00000467985 ADAM17P78536 824 aa21.76■■□□□ 1.07
COL7A1-207ENST00000467985 MBTPS1Q14703 1052 aa21.76■■□□□ 1.07
COL7A1-207ENST00000467985 PKN1Q16512 942 aa21.76■■□□□ 1.07
COL7A1-207ENST00000467985 REXO1Q8N1G1 1221 aaKnown RBP21.76■■□□□ 1.07
COL7A1-207ENST00000467985 CYP2W1Q8TAV3 490 aa21.76■■□□□ 1.07
COL7A1-207ENST00000467985 BICD2Q8TD16 824 aa21.76■■□□□ 1.07
COL7A1-207ENST00000467985 KAT6AQ92794 2004 aa21.76■■□□□ 1.07
COL7A1-207ENST00000467985 PGBD1Q96JS3 809 aa21.76■■□□□ 1.07
COL7A1-207ENST00000467985 CA3P07451 260 aa21.75■■□□□ 1.07
COL7A1-207ENST00000467985 NTRK3Q16288 839 aa21.75■■□□□ 1.07
COL7A1-207ENST00000467985 JAKMIP3Q5VZ66 844 aa21.75■■□□□ 1.07
COL7A1-207ENST00000467985 TAF2Q6P1X5 1199 aa21.75■■□□□ 1.07
COL7A1-207ENST00000467985 CCDC148Q8NFR7 591 aa21.75■■□□□ 1.07
COL7A1-207ENST00000467985 PHKBQ93100 1093 aa21.75■■□□□ 1.07
COL7A1-207ENST00000467985 AZI2Q9H6S1 392 aa21.75■■□□□ 1.07
COL7A1-207ENST00000467985 TLL1O43897 1013 aa21.74■■□□□ 1.07
COL7A1-207ENST00000467985 CYP3A4P08684 503 aa21.74■■□□□ 1.07
COL7A1-207ENST00000467985 PPFIA1Q13136 1202 aa21.74■■□□□ 1.07
COL7A1-207ENST00000467985 ZNF274Q96GC6 653 aaPredicted RBP21.74■■□□□ 1.07
COL7A1-207ENST00000467985 ZBED2Q9BTP6 218 aa21.74■■□□□ 1.07
COL7A1-207ENST00000467985 SLC26A6Q9BXS9 759 aa21.74■■□□□ 1.07
COL7A1-207ENST00000467985 AGO4Q9HCK5 861 aaKnown RBP21.74■■□□□ 1.07
COL7A1-207ENST00000467985 RPLP2P05387 115 aaKnown RBP21.73■■□□□ 1.07
COL7A1-207ENST00000467985 ARP10275 920 aa21.73■■□□□ 1.07
COL7A1-207ENST00000467985 ACTR2P61160 394 aa21.73■■□□□ 1.07
COL7A1-207ENST00000467985 TOB2Q14106 344 aaPredicted RBP21.73■■□□□ 1.07
COL7A1-207ENST00000467985 PLEKHG4Q58EX7 1191 aa21.73■■□□□ 1.07
COL7A1-207ENST00000467985 RPAINQ86UA6 219 aa21.73■■□□□ 1.07
COL7A1-207ENST00000467985 RSPH3Q86UC2 560 aa21.73■■□□□ 1.07
COL7A1-207ENST00000467985 TRIM22Q8IYM9 498 aa21.73■■□□□ 1.07
COL7A1-207ENST00000467985 CRYGNQ8WXF5 182 aa21.73■■□□□ 1.07
COL7A1-207ENST00000467985 SH3GLB2Q9NR46 395 aa21.73■■□□□ 1.07
COL7A1-207ENST00000467985 RRN3P2A6NIE6 340 aa21.72■■□□□ 1.07
COL7A1-207ENST00000467985 DLL1O00548 723 aa21.72■■□□□ 1.07
COL7A1-207ENST00000467985 MARK3P27448 753 aa21.72■■□□□ 1.07
COL7A1-207ENST00000467985 CCT2P78371 535 aaKnown RBP21.72■■□□□ 1.07
COL7A1-207ENST00000467985 ITGB3BPQ13352 177 aaPredicted RBP21.72■■□□□ 1.07
COL7A1-207ENST00000467985 GRIK4Q16099 956 aa21.72■■□□□ 1.07
COL7A1-207ENST00000467985 FAM26DQ5JW98 314 aa21.72■■□□□ 1.07
COL7A1-207ENST00000467985 PLPPR4Q7Z2D5 763 aa21.72■■□□□ 1.07
COL7A1-207ENST00000467985 SEPT8Q92599 483 aa21.72■■□□□ 1.07
COL7A1-207ENST00000467985 NCOA5Q9HCD5 579 aaKnown RBP21.72■■□□□ 1.07
COL7A1-207ENST00000467985 TUBE1Q9UJT0 475 aa21.72■■□□□ 1.07
COL7A1-207ENST00000467985 REV3LO60673 3130 aa21.72■■□□□ 1.07
COL7A1-207ENST00000467985 MBLAC1A4D2B0 266 aaPredicted RBP21.71■■□□□ 1.07
COL7A1-207ENST00000467985 CPLX1O14810 134 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms