RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 SPATS1Q496A3 300 aa5.65□□□□□ -1.5
SSR3-204ENST00000467733 MEI1Q5TIA1 1274 aa5.65□□□□□ -1.5
SSR3-204ENST00000467733 STYK1Q6J9G0 422 aa5.65□□□□□ -1.5
SSR3-204ENST00000467733 CYP4F22Q6NT55 531 aa5.65□□□□□ -1.5
SSR3-204ENST00000467733 FRMD5Q7Z6J6 570 aa5.65□□□□□ -1.5
SSR3-204ENST00000467733 FAM129CQ86XR2 697 aa5.65□□□□□ -1.5
SSR3-204ENST00000467733 DNAJC10Q8IXB1 793 aa5.65□□□□□ -1.5
SSR3-204ENST00000467733 GATAD2BQ8WXI9 593 aa5.65□□□□□ -1.5
SSR3-204ENST00000467733 SIN3AQ96ST3 1273 aa5.65□□□□□ -1.5
SSR3-204ENST00000467733 BRIP1Q9BX63 1249 aa5.65□□□□□ -1.5
SSR3-204ENST00000467733 FOXP3Q9BZS1 431 aa5.65□□□□□ -1.5
SSR3-204ENST00000467733 EPB41L4AQ9HCS5 686 aaPredicted RBP5.65□□□□□ -1.5
SSR3-204ENST00000467733 ZBTB1Q9Y2K1 713 aa5.65□□□□□ -1.5
SSR3-204ENST00000467733 RNF123Q5XPI4 1314 aa5.65□□□□□ -1.51
SSR3-204ENST00000467733 SIPA1L3O60292 1781 aaPredicted RBP5.65□□□□□ -1.51
SSR3-204ENST00000467733 ST20-MTHFSA0A0A6YYL1 179 aa5.64□□□□□ -1.51
SSR3-204ENST00000467733 FAM221AA4D161 298 aa5.64□□□□□ -1.51
SSR3-204ENST00000467733 HTR3BO95264 441 aa5.64□□□□□ -1.51
SSR3-204ENST00000467733 MTHFSP49914 203 aa5.64□□□□□ -1.51
SSR3-204ENST00000467733 CDR1P51861 262 aa5.64□□□□□ -1.51
SSR3-204ENST00000467733 LMNB2Q03252 620 aa5.64□□□□□ -1.51
SSR3-204ENST00000467733 GRM1Q13255 1194 aa5.64□□□□□ -1.51
SSR3-204ENST00000467733 AMOTQ4VCS5 1084 aa5.64□□□□□ -1.51
SSR3-204ENST00000467733 PLEKHO1Q53GL0 409 aaPredicted RBP5.64□□□□□ -1.51
SSR3-204ENST00000467733 CCDC93Q567U6 631 aa5.64□□□□□ -1.51
SSR3-204ENST00000467733 C1orf141Q5JVX7 400 aa5.64□□□□□ -1.51
SSR3-204ENST00000467733 PRR5LQ6MZQ0 368 aa5.64□□□□□ -1.51
SSR3-204ENST00000467733 GALNT18Q6P9A2 607 aa5.64□□□□□ -1.51
SSR3-204ENST00000467733 BNC2Q6ZN30 1099 aaPredicted RBP5.64□□□□□ -1.51
SSR3-204ENST00000467733 GGNQ86UU5 652 aa5.64□□□□□ -1.51
SSR3-204ENST00000467733 LINC01356Q8N9X3 169 aa5.64□□□□□ -1.51
SSR3-204ENST00000467733 HHIPL1Q96JK4 782 aa5.64□□□□□ -1.51
SSR3-204ENST00000467733 FCRL2Q96LA5 508 aaPredicted RBP5.64□□□□□ -1.51
SSR3-204ENST00000467733 TAF6LQ9Y6J9 622 aa5.64□□□□□ -1.51
SSR3-204ENST00000467733 CENPFP49454 3210 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 COL4A5P29400 1685 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 TRIOBPQ9H2D6 2365 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 TMEM82A0PJX8 343 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 CHURC1-FNTBB4DL54 471 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 SRGNP10124 158 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 ZNF16P17020 682 aaPredicted RBP5.63□□□□□ -1.51
SSR3-204ENST00000467733 GBP1P32455 592 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 SOX10P56693 466 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 RTP1P59025 263 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 EFEMP1Q12805 493 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 LAPTM5Q13571 262 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 PWP1Q13610 501 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 TBC1D9BQ66K14 1250 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 TMEFF1Q8IYR6 380 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 ZDHHC14Q8IZN3 488 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 GPC2Q8N158 579 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 CNBD1Q8NA66 436 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 VWCEQ96DN2 955 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 TCTN2Q96GX1 697 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 TNFRSF10DQ9UBN6 386 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 POLKQ9UBT6 870 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 SNED1Q8TER0 1413 aa5.63□□□□□ -1.51
SSR3-204ENST00000467733 A0A087WZG4 1122 aa5.62□□□□□ -1.51
SSR3-204ENST00000467733 WTIPA6NIX2 430 aaPredicted RBP5.62□□□□□ -1.51
SSR3-204ENST00000467733 FZD9O00144 591 aa5.62□□□□□ -1.51
SSR3-204ENST00000467733 F13A1P00488 732 aa5.62□□□□□ -1.51
SSR3-204ENST00000467733 CTSHP09668 335 aa5.62□□□□□ -1.51
SSR3-204ENST00000467733 ST5P78524 1137 aa5.62□□□□□ -1.51
SSR3-204ENST00000467733 CAP1Q01518 475 aa5.62□□□□□ -1.51
SSR3-204ENST00000467733 CAMK2GQ13555 558 aaPredicted RBP5.62□□□□□ -1.51
SSR3-204ENST00000467733 CST9Q5W186 159 aa5.62□□□□□ -1.51
SSR3-204ENST00000467733 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
SSR3-204ENST00000467733 TMC6Q7Z403 805 aa5.62□□□□□ -1.51
SSR3-204ENST00000467733 GCC1Q96CN9 775 aa5.62□□□□□ -1.51
SSR3-204ENST00000467733 MASTLQ96GX5 879 aa5.62□□□□□ -1.51
SSR3-204ENST00000467733 PWWP2AQ96N64 755 aa5.62□□□□□ -1.51
SSR3-204ENST00000467733 KIF2CQ99661 725 aa5.62□□□□□ -1.51
SSR3-204ENST00000467733 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.62□□□□□ -1.51
SSR3-204ENST00000467733 SLC52A2Q9HAB3 445 aa5.62□□□□□ -1.51
SSR3-204ENST00000467733 ZNF277Q9NRM2 450 aaPredicted RBP5.62□□□□□ -1.51
SSR3-204ENST00000467733 TRAF5O00463 557 aa5.61□□□□□ -1.51
SSR3-204ENST00000467733 RGS13O14921 159 aa5.61□□□□□ -1.51
SSR3-204ENST00000467733 SYPP08247 313 aa5.61□□□□□ -1.51
SSR3-204ENST00000467733 SDHBP21912 280 aa5.61□□□□□ -1.51
SSR3-204ENST00000467733 IARSP41252 1262 aaKnown RBP5.61□□□□□ -1.51
SSR3-204ENST00000467733 EIF5P55010 431 aaKnown RBP5.61□□□□□ -1.51
SSR3-204ENST00000467733 PLP2Q04941 152 aa5.61□□□□□ -1.51
SSR3-204ENST00000467733 KIAA0100Q14667 2235 aaKnown RBP5.61□□□□□ -1.51
SSR3-204ENST00000467733 VMACQ2NL98 169 aa5.61□□□□□ -1.51
SSR3-204ENST00000467733 ZXDCQ2QGD7 858 aaPredicted RBP5.61□□□□□ -1.51
SSR3-204ENST00000467733 BBS9Q3SYG4 887 aa5.61□□□□□ -1.51
SSR3-204ENST00000467733 RBBP6Q7Z6E9 1792 aaKnown RBP5.61□□□□□ -1.51
SSR3-204ENST00000467733 SAPCD2Q86UD0 394 aa5.61□□□□□ -1.51
SSR3-204ENST00000467733 RELL1Q8IUW5 271 aa5.61□□□□□ -1.51
SSR3-204ENST00000467733 IGDCC3Q8IVU1 814 aa5.61□□□□□ -1.51
SSR3-204ENST00000467733 SYT8Q8NBV8 401 aa5.61□□□□□ -1.51
SSR3-204ENST00000467733 PLCD4Q9BRC7 762 aa5.61□□□□□ -1.51
SSR3-204ENST00000467733 ADAM7Q9H2U9 754 aa5.61□□□□□ -1.51
SSR3-204ENST00000467733 KLHL14Q9P2G3 628 aa5.61□□□□□ -1.51
SSR3-204ENST00000467733 CNOT11Q9UKZ1 510 aaKnown RBP5.61□□□□□ -1.51
SSR3-204ENST00000467733 BRCA2P51587 3418 aa5.61□□□□□ -1.51
SSR3-204ENST00000467733 SZT2Q5T011 3432 aa5.61□□□□□ -1.51
SSR3-204ENST00000467733 POLR2AP24928 1970 aaKnown RBP5.6□□□□□ -1.51
SSR3-204ENST00000467733 COL6A3P12111 3177 aa5.6□□□□□ -1.51
SSR3-204ENST00000467733 FADS2P1A8MWK0 482 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms