RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 REV3LO60673 3130 aa7.54□□□□□ -1.2
UBXN4-205ENST00000467065 MYH9P35579 1960 aaKnown RBP7.53□□□□□ -1.2
UBXN4-205ENST00000467065 CCDC194A0A1B0GVG4 234 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 SMCO2A6NFE2 343 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 A6NJR5 290 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 FOSP01100 380 aaPredicted RBP7.53□□□□□ -1.2
UBXN4-205ENST00000467065 GH1P01241 217 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 MMP3P08254 477 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 CYP2C9P11712 490 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 SCG2P13521 617 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 GJB2P29033 226 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 ADCY7P51828 1080 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 CCL23P55773 120 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 NUCB2P80303 420 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 SMAD3P84022 425 aaKnown RBP7.53□□□□□ -1.2
UBXN4-205ENST00000467065 GHRHRQ02643 423 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 PGM5Q15124 567 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 BRDTQ58F21 947 aaPredicted RBP7.53□□□□□ -1.2
UBXN4-205ENST00000467065 TMEM240Q5SV17 173 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 FAM109BQ6ICB4 259 aaPredicted RBP7.53□□□□□ -1.2
UBXN4-205ENST00000467065 FCHSD1Q86WN1 690 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 CMTR1Q8N1G2 835 aaKnown RBP7.53□□□□□ -1.2
UBXN4-205ENST00000467065 SRBD1Q8N5C6 995 aaKnown RBP7.53□□□□□ -1.2
UBXN4-205ENST00000467065 GPKOWQ92917 476 aaPredicted RBP eCLIP7.53□□□□□ -1.2
UBXN4-205ENST00000467065 PHKBQ93100 1093 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 SCLYQ96I15 445 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 GUCD1Q96NT3 240 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 IPO9Q96P70 1041 aaKnown RBP7.53□□□□□ -1.2
UBXN4-205ENST00000467065 KIF2CQ99661 725 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 NAP1L4Q99733 375 aaKnown RBP7.53□□□□□ -1.2
UBXN4-205ENST00000467065 NOC4LQ9BVI4 516 aaKnown RBP7.53□□□□□ -1.2
UBXN4-205ENST00000467065 NOL7Q9UMY1 257 aaKnown RBP7.53□□□□□ -1.2
UBXN4-205ENST00000467065 STXBP5LQ9Y2K9 1186 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 MRVI1Q9Y6F6 885 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 NLRC5Q86WI3 1866 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 A0A0C4DFX4 3053 aa7.53□□□□□ -1.2
UBXN4-205ENST00000467065 hCG_1642624A0A1W2PR95 340 aa7.52□□□□□ -1.21
UBXN4-205ENST00000467065 VPS37CA5D8V6 355 aaPredicted RBP7.52□□□□□ -1.21
UBXN4-205ENST00000467065 GRXCR1A8MXD5 290 aa7.52□□□□□ -1.21
UBXN4-205ENST00000467065 EIF3JO75822 258 aaKnown RBP7.52□□□□□ -1.21
UBXN4-205ENST00000467065 RGS20O76081 388 aa7.52□□□□□ -1.21
UBXN4-205ENST00000467065 ZNF286BP0CG31 522 aa7.52□□□□□ -1.21
UBXN4-205ENST00000467065 DNAJB2P25686 324 aa7.52□□□□□ -1.21
UBXN4-205ENST00000467065 CCND2P30279 289 aa7.52□□□□□ -1.21
UBXN4-205ENST00000467065 KRT2P35908 639 aa7.52□□□□□ -1.21
UBXN4-205ENST00000467065 PFKFB3Q16875 520 aaPredicted RBP7.52□□□□□ -1.21
UBXN4-205ENST00000467065 DMRTA1Q5VZB9 504 aa7.52□□□□□ -1.21
UBXN4-205ENST00000467065 PPP1R18Q6NYC8 613 aa7.52□□□□□ -1.21
UBXN4-205ENST00000467065 PSRC1Q6PGN9 363 aaPredicted RBP7.52□□□□□ -1.21
UBXN4-205ENST00000467065 ZNF365Q70YC5 407 aa7.52□□□□□ -1.21
UBXN4-205ENST00000467065 SEZ6LQ9BYH1 1024 aa7.52□□□□□ -1.21
UBXN4-205ENST00000467065 TTYH1Q9H313 450 aaPredicted RBP7.52□□□□□ -1.21
UBXN4-205ENST00000467065 IL23AQ9NPF7 189 aa7.52□□□□□ -1.21
UBXN4-205ENST00000467065 DDX41Q9UJV9 622 aaKnown RBP7.52□□□□□ -1.21
UBXN4-205ENST00000467065 FRMPD4Q14CM0 1322 aa7.52□□□□□ -1.21
UBXN4-205ENST00000467065 TRANK1O15050 2925 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 EVPLQ92817 2033 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.51□□□□□ -1.21
UBXN4-205ENST00000467065 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.51□□□□□ -1.21
UBXN4-205ENST00000467065 GOLGA6L22H0YM25 854 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 RBAK-RBAKDNI3L0D1 243 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 KPNA6O60684 536 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 GGPS1O95749 300 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 NCLP19338 710 aaKnown RBP7.51□□□□□ -1.21
UBXN4-205ENST00000467065 UBA1P22314 1058 aaKnown RBP7.51□□□□□ -1.21
UBXN4-205ENST00000467065 CDC27P30260 824 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 CSPP1Q1MSJ5 1256 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 RASIP1Q5U651 963 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 GDF6Q6KF10 455 aaPredicted RBP7.51□□□□□ -1.21
UBXN4-205ENST00000467065 NFRKBQ6P4R8 1299 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 USP17L6PQ6QN14 398 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 OTOP2Q7RTS6 562 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 DEFB128Q7Z7B8 93 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 VSIG10LQ86VR7 867 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 DHX37Q8IY37 1157 aaKnown RBP7.51□□□□□ -1.21
UBXN4-205ENST00000467065 TMC2Q8TDI7 906 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 MYLIPQ8WY64 445 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 KAT2BQ92831 832 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 ZSCAN16Q9H4T2 348 aaPredicted RBP7.51□□□□□ -1.21
UBXN4-205ENST00000467065 BARHL2Q9NY43 387 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 CXXC1Q9P0U4 656 aaPredicted RBP7.51□□□□□ -1.21
UBXN4-205ENST00000467065 CEP131Q9UPN4 1083 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 CNTNAP5Q8WYK1 1306 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 STK36Q9NRP7 1315 aa7.51□□□□□ -1.21
UBXN4-205ENST00000467065 GOLGA6L4A6NEF3 574 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 PPFIA3O75145 1194 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 BAG4O95429 457 aaKnown RBP7.5□□□□□ -1.21
UBXN4-205ENST00000467065 FGBP02675 491 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 SUPT20HL2P0C7V6 817 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 PSEN2P49810 448 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 MRPS9P82933 396 aaKnown RBP7.5□□□□□ -1.21
UBXN4-205ENST00000467065 SP2Q02086 613 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 LAMC2Q13753 1193 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 MFSD10Q14728 455 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 SF3A1Q15459 793 aaKnown RBP7.5□□□□□ -1.21
UBXN4-205ENST00000467065 PTGISQ16647 500 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 DGKDQ16760 1214 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 UBE2SQ16763 222 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 KIAA0753Q2KHM9 967 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 HSDL1Q3SXM5 330 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms