RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 LBX2Q6XYB7 198 aa4.56□□□□□ -1.68
SNX4-202ENST00000465505 ARHGEF18Q6ZSZ5 1173 aa4.56□□□□□ -1.68
SNX4-202ENST00000465505 SPRED1Q7Z699 444 aa4.56□□□□□ -1.68
SNX4-202ENST00000465505 CIR1Q86X95 450 aaPredicted RBP4.56□□□□□ -1.68
SNX4-202ENST00000465505 SLC43A3Q8NBI5 491 aa4.56□□□□□ -1.68
SNX4-202ENST00000465505 SH3RF3Q8TEJ3 882 aaPredicted RBP4.56□□□□□ -1.68
SNX4-202ENST00000465505 OSBP2Q969R2 916 aa4.56□□□□□ -1.68
SNX4-202ENST00000465505 WWC2-AS2Q96NR7 200 aa4.56□□□□□ -1.68
SNX4-202ENST00000465505 DLL4Q9NR61 685 aa4.56□□□□□ -1.68
SNX4-202ENST00000465505 ARHGEF4Q9NR80 690 aa4.56□□□□□ -1.68
SNX4-202ENST00000465505 TSC22D4Q9Y3Q8 395 aa4.56□□□□□ -1.68
SNX4-202ENST00000465505 R3HCC1Q9Y3T6 440 aaKnown RBP4.56□□□□□ -1.68
SNX4-202ENST00000465505 TELO2Q9Y4R8 837 aa4.56□□□□□ -1.68
SNX4-202ENST00000465505 NKRFO15226 690 aaKnown RBP eCLIP4.55□□□□□ -1.68
SNX4-202ENST00000465505 PRODHO43272 600 aa4.55□□□□□ -1.68
SNX4-202ENST00000465505 CHGBP05060 677 aa4.55□□□□□ -1.68
SNX4-202ENST00000465505 PABPC1P11940 636 aaKnown RBP4.55□□□□□ -1.68
SNX4-202ENST00000465505 DNAJA1P31689 397 aaKnown RBP4.55□□□□□ -1.68
SNX4-202ENST00000465505 SLFN13Q68D06 897 aa4.55□□□□□ -1.68
SNX4-202ENST00000465505 VASNQ6EMK4 673 aa4.55□□□□□ -1.68
SNX4-202ENST00000465505 NSMFQ6X4W1 530 aa4.55□□□□□ -1.68
SNX4-202ENST00000465505 SLC16A11Q8NCK7 471 aa4.55□□□□□ -1.68
SNX4-202ENST00000465505 UHMK1Q8TAS1 419 aaKnown RBP4.55□□□□□ -1.68
SNX4-202ENST00000465505 KCNJ15Q99712 375 aa4.55□□□□□ -1.68
SNX4-202ENST00000465505 ZFYVE21Q9BQ24 234 aa4.55□□□□□ -1.68
SNX4-202ENST00000465505 POLR3GLQ9BT43 218 aa4.55□□□□□ -1.68
SNX4-202ENST00000465505 AARSD1Q9BTE6 412 aaKnown RBP4.55□□□□□ -1.68
SNX4-202ENST00000465505 ANP32EQ9BTT0 268 aa4.55□□□□□ -1.68
SNX4-202ENST00000465505 KLC2Q9H0B6 622 aa4.55□□□□□ -1.68
SNX4-202ENST00000465505 IQCA1LA6NCM1 817 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 PATE3B3GLJ2 98 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 KNG1P01042 644 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 FSHBP01225 129 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 ENO2P09104 434 aaPredicted RBP4.54□□□□□ -1.68
SNX4-202ENST00000465505 GRK2P25098 689 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 GRK3P35626 688 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 EPHA5P54756 1037 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 GPR85P60893 370 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 PFKPQ01813 784 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 SPIRE1Q08AE8 756 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 SMAD2Q15796 467 aaKnown RBP4.54□□□□□ -1.68
SNX4-202ENST00000465505 SKIDA1Q1XH10 827 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 KIZQ2M2Z5 673 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 STYK1Q6J9G0 422 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 Q6ZUG5 572 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 ST13P5Q8NFI4 369 aaPredicted RBP4.54□□□□□ -1.68
SNX4-202ENST00000465505 KISS1RQ969F8 398 aaPredicted RBP4.54□□□□□ -1.68
SNX4-202ENST00000465505 AJUBAQ96IF1 538 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 MEGF9Q9H1U4 602 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 JADE2Q9NQC1 790 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 DSEQ9UL01 958 aa4.54□□□□□ -1.68
SNX4-202ENST00000465505 BLACEA4D250 179 aa4.53□□□□□ -1.68
SNX4-202ENST00000465505 ACOT7O00154 380 aa4.53□□□□□ -1.68
SNX4-202ENST00000465505 IL18BPO95998 194 aa4.53□□□□□ -1.68
SNX4-202ENST00000465505 GNAT1P11488 350 aa4.53□□□□□ -1.68
SNX4-202ENST00000465505 GLRBP48167 497 aa4.53□□□□□ -1.68
SNX4-202ENST00000465505 R3HDM1Q15032 1099 aaKnown RBP4.53□□□□□ -1.68
SNX4-202ENST00000465505 YOD1Q5VVQ6 348 aaPredicted RBP4.53□□□□□ -1.68
SNX4-202ENST00000465505 CD276Q5ZPR3 534 aa4.53□□□□□ -1.68
SNX4-202ENST00000465505 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.53□□□□□ -1.68
SNX4-202ENST00000465505 IFNL3Q8IZI9 196 aa4.53□□□□□ -1.68
SNX4-202ENST00000465505 Q8N1X5 172 aa4.53□□□□□ -1.68
SNX4-202ENST00000465505 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.53□□□□□ -1.68
SNX4-202ENST00000465505 NAP1L5Q96NT1 182 aaPredicted RBP4.53□□□□□ -1.68
SNX4-202ENST00000465505 CDK5RAP1Q96SZ6 601 aaKnown RBP4.53□□□□□ -1.68
SNX4-202ENST00000465505 DEF6Q9H4E7 631 aa4.53□□□□□ -1.68
SNX4-202ENST00000465505 KCND1Q9NSA2 647 aa4.53□□□□□ -1.68
SNX4-202ENST00000465505 NUB1Q9Y5A7 615 aa4.53□□□□□ -1.68
SNX4-202ENST00000465505 ASXL2Q76L83 1435 aa4.53□□□□□ -1.68
SNX4-202ENST00000465505 TRAV20A0A0B4J274 112 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 ZNF839A8K0R7 811 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 FAM47E-STBD1D6RA91 191 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 ZNF623O75123 536 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 FBXO21O94952 628 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 CNOT4O95628 575 aaKnown RBP4.52□□□□□ -1.69
SNX4-202ENST00000465505 SOD2P04179 222 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 CSF2RBP32927 897 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 ZEB1P37275 1124 aaPredicted RBP4.52□□□□□ -1.69
SNX4-202ENST00000465505 RAB33AQ14088 237 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 ZNF585AQ6P3V2 769 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 KCTD1Q719H9 257 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 STPG3Q8N7X2 389 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 Q8TCH9 128 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 SH3RF2Q8TEC5 729 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 ZNF428Q96B54 188 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 PSMD1Q99460 953 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 KATNBL1Q9H079 304 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 IPPKQ9H8X2 491 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 SEC61A2Q9H9S3 476 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 ARHGAP20Q9P2F6 1191 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 ZFP69BQ9UJL9 534 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 SLC4A7Q9Y6M7 1214 aa4.52□□□□□ -1.69
SNX4-202ENST00000465505 TCRBV5S4A2TA0A5A2 114 aa4.51□□□□□ -1.69
SNX4-202ENST00000465505 C6P13671 934 aa4.51□□□□□ -1.69
SNX4-202ENST00000465505 SETQ01105 290 aaPredicted RBP4.51□□□□□ -1.69
SNX4-202ENST00000465505 IFRD2Q12894 506 aaPredicted RBP4.51□□□□□ -1.69
SNX4-202ENST00000465505 CRIP3Q6Q6R5 217 aa4.51□□□□□ -1.69
SNX4-202ENST00000465505 RALYLQ86SE5 291 aaKnown RBP4.51□□□□□ -1.69
SNX4-202ENST00000465505 CERS3Q8IU89 383 aa4.51□□□□□ -1.69
SNX4-202ENST00000465505 LRRC47Q8N1G4 583 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms