RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 EPC2Q52LR7 807 aa16.34■□□□□ 0.21
ATG4B-214ENST00000465399 TMTC2Q8N394 836 aa16.34■□□□□ 0.21
ATG4B-214ENST00000465399 GPRASP2Q96D09 838 aa16.34■□□□□ 0.21
ATG4B-214ENST00000465399 MRPL38Q96DV4 380 aaKnown RBP16.34■□□□□ 0.21
ATG4B-214ENST00000465399 IFIH1Q9BYX4 1025 aaKnown RBP16.34■□□□□ 0.21
ATG4B-214ENST00000465399 SUPT16HQ9Y5B9 1047 aaKnown RBP16.34■□□□□ 0.21
ATG4B-214ENST00000465399 NRCAMQ92823 1304 aa16.34■□□□□ 0.21
ATG4B-214ENST00000465399 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-214ENST00000465399 CALM1P0DP23 149 aa16.33■□□□□ 0.2
ATG4B-214ENST00000465399 CALM2P0DP24 149 aa16.33■□□□□ 0.2
ATG4B-214ENST00000465399 CALM3P0DP25 149 aa16.33■□□□□ 0.2
ATG4B-214ENST00000465399 KCNA5P22460 613 aa16.33■□□□□ 0.2
ATG4B-214ENST00000465399 TCF7P36402 384 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-214ENST00000465399 ADAM17P78536 824 aa16.33■□□□□ 0.2
ATG4B-214ENST00000465399 TMEM87BQ96K49 555 aa16.33■□□□□ 0.2
ATG4B-214ENST00000465399 EPHX3Q9H6B9 360 aa16.33■□□□□ 0.2
ATG4B-214ENST00000465399 PSTPIP2Q9H939 334 aa16.33■□□□□ 0.2
ATG4B-214ENST00000465399 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-214ENST00000465399 PLEKHA8P1O95397 391 aa16.32■□□□□ 0.2
ATG4B-214ENST00000465399 LEXMQ3ZCV2 418 aa16.32■□□□□ 0.2
ATG4B-214ENST00000465399 TIGD5Q53EQ6 642 aa16.32■□□□□ 0.2
ATG4B-214ENST00000465399 FAM26DQ5JW98 314 aa16.32■□□□□ 0.2
ATG4B-214ENST00000465399 TAF2Q6P1X5 1199 aa16.32■□□□□ 0.2
ATG4B-214ENST00000465399 RSPH3Q86UC2 560 aa16.32■□□□□ 0.2
ATG4B-214ENST00000465399 OSBPL7Q9BZF2 842 aa16.32■□□□□ 0.2
ATG4B-214ENST00000465399 ERAP1Q9NZ08 941 aa16.32■□□□□ 0.2
ATG4B-214ENST00000465399 TELO2Q9Y4R8 837 aa16.32■□□□□ 0.2
ATG4B-214ENST00000465399 SPDYE3A6NKU9 549 aa16.31■□□□□ 0.2
ATG4B-214ENST00000465399 H3BNC9 293 aa16.31■□□□□ 0.2
ATG4B-214ENST00000465399 SH2B2O14492 632 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-214ENST00000465399 KCNA2P16389 499 aa16.31■□□□□ 0.2
ATG4B-214ENST00000465399 PLA2G5P39877 138 aa16.31■□□□□ 0.2
ATG4B-214ENST00000465399 PPFIA1Q13136 1202 aa16.31■□□□□ 0.2
ATG4B-214ENST00000465399 GPM6BQ13491 265 aa16.31■□□□□ 0.2
ATG4B-214ENST00000465399 MTMR1Q13613 665 aa16.31■□□□□ 0.2
ATG4B-214ENST00000465399 TMEM31Q5JXX7 168 aa16.31■□□□□ 0.2
ATG4B-214ENST00000465399 TMEM192Q8IY95 271 aa16.31■□□□□ 0.2
ATG4B-214ENST00000465399 SRBD1Q8N5C6 995 aaKnown RBP16.31■□□□□ 0.2
ATG4B-214ENST00000465399 SEPT1Q8WYJ6 367 aa16.31■□□□□ 0.2
ATG4B-214ENST00000465399 FAM122AQ96E09 287 aa16.31■□□□□ 0.2
ATG4B-214ENST00000465399 TUBE1Q9UJT0 475 aa16.31■□□□□ 0.2
ATG4B-214ENST00000465399 HCN4Q9Y3Q4 1203 aa16.31■□□□□ 0.2
ATG4B-214ENST00000465399 TTC3P53804 2025 aa16.3■□□□□ 0.2
ATG4B-214ENST00000465399 ATP9AO75110 1047 aa16.3■□□□□ 0.2
ATG4B-214ENST00000465399 RXRAP19793 462 aa16.3■□□□□ 0.2
ATG4B-214ENST00000465399 LIFRP42702 1097 aa16.3■□□□□ 0.2
ATG4B-214ENST00000465399 PTCRAQ6ISU1 281 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-214ENST00000465399 RPAINQ86UA6 219 aa16.3■□□□□ 0.2
ATG4B-214ENST00000465399 CMTR1Q8N1G2 835 aaKnown RBP16.3■□□□□ 0.2
ATG4B-214ENST00000465399 BANK1Q8NDB2 785 aa16.3■□□□□ 0.2
ATG4B-214ENST00000465399 GLG1Q92896 1179 aa16.3■□□□□ 0.2
ATG4B-214ENST00000465399 IL17RAQ96F46 866 aa16.3■□□□□ 0.2
ATG4B-214ENST00000465399 LRFN3Q9BTN0 628 aa16.3■□□□□ 0.2
ATG4B-214ENST00000465399 EHMT1Q9H9B1 1298 aa16.3■□□□□ 0.2
ATG4B-214ENST00000465399 SLC12A7Q9Y666 1083 aa16.3■□□□□ 0.2
ATG4B-214ENST00000465399 KIAA1671Q9BY89 1806 aa16.3■□□□□ 0.2
ATG4B-214ENST00000465399 CHRNA1P02708 482 aa16.29■□□□□ 0.2
ATG4B-214ENST00000465399 GHRP10912 638 aa16.29■□□□□ 0.2
ATG4B-214ENST00000465399 ITGB5P18084 799 aa16.29■□□□□ 0.2
ATG4B-214ENST00000465399 MARK3P27448 753 aa16.29■□□□□ 0.2
ATG4B-214ENST00000465399 GRIK4Q16099 956 aa16.29■□□□□ 0.2
ATG4B-214ENST00000465399 PUS10Q3MIT2 529 aaKnown RBP16.29■□□□□ 0.2
ATG4B-214ENST00000465399 RUFY4Q6ZNE9 571 aa16.29■□□□□ 0.2
ATG4B-214ENST00000465399 FIBCD1Q8N539 461 aa16.29■□□□□ 0.2
ATG4B-214ENST00000465399 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-214ENST00000465399 SMARCAD1Q9H4L7 1026 aa16.29■□□□□ 0.2
ATG4B-214ENST00000465399 PKD2L1Q9P0L9 805 aa16.29■□□□□ 0.2
ATG4B-214ENST00000465399 RWDD3Q9Y3V2 267 aa16.29■□□□□ 0.2
ATG4B-214ENST00000465399 ADGRA3Q8IWK6 1321 aa16.28■□□□□ 0.2
ATG4B-214ENST00000465399 GSTTP1A0A1W2PQM5 241 aa16.28■□□□□ 0.2
ATG4B-214ENST00000465399 hCG_1642624A0A1W2PR95 340 aa16.28■□□□□ 0.2
ATG4B-214ENST00000465399 SLC27A2O14975 620 aa16.28■□□□□ 0.2
ATG4B-214ENST00000465399 MAFGO15525 162 aa16.28■□□□□ 0.2
ATG4B-214ENST00000465399 RPLP2P05387 115 aaKnown RBP16.28■□□□□ 0.2
ATG4B-214ENST00000465399 CTNNB1P35222 781 aa16.28■□□□□ 0.2
ATG4B-214ENST00000465399 IRX6P78412 446 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-214ENST00000465399 MGAT3Q09327 533 aa16.28■□□□□ 0.2
ATG4B-214ENST00000465399 UBE2SQ16763 222 aa16.28■□□□□ 0.2
ATG4B-214ENST00000465399 TMTC3Q6ZXV5 915 aa16.28■□□□□ 0.2
ATG4B-214ENST00000465399 HEATR3Q7Z4Q2 680 aa16.28■□□□□ 0.2
ATG4B-214ENST00000465399 FAM178BQ8IXR5 827 aa16.28■□□□□ 0.2
ATG4B-214ENST00000465399 CCDC82Q8N4S0 544 aa16.28■□□□□ 0.2
ATG4B-214ENST00000465399 KHSRPQ92945 711 aaKnown RBP eCLIP16.28■□□□□ 0.23e-7■■□□□ 12.3
ATG4B-214ENST00000465399 LSG1Q9H089 658 aaKnown RBP16.28■□□□□ 0.2
ATG4B-214ENST00000465399 NSUN3Q9H649 340 aaKnown RBP16.28■□□□□ 0.2
ATG4B-214ENST00000465399 PCDHA6Q9UN73 950 aa16.28■□□□□ 0.2
ATG4B-214ENST00000465399 PCDHA8Q9Y5H6 950 aa16.28■□□□□ 0.2
ATG4B-214ENST00000465399 UBIAD1Q9Y5Z9 338 aa16.28■□□□□ 0.2
ATG4B-214ENST00000465399 GPR37L1O60883 481 aa16.27■□□□□ 0.2
ATG4B-214ENST00000465399 IL9P15248 144 aa16.27■□□□□ 0.2
ATG4B-214ENST00000465399 SSTR3P32745 418 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-214ENST00000465399 LPIN1Q14693 890 aa16.27■□□□□ 0.2
ATG4B-214ENST00000465399 TCEAL5Q5H9L2 206 aa16.27■□□□□ 0.2
ATG4B-214ENST00000465399 EP400NLQ6ZTU2 488 aa16.27■□□□□ 0.2
ATG4B-214ENST00000465399 MICU3Q86XE3 530 aa16.27■□□□□ 0.2
ATG4B-214ENST00000465399 RAB11FIP4Q86YS3 637 aa16.27■□□□□ 0.2
ATG4B-214ENST00000465399 GJD3Q8N144 294 aa16.27■□□□□ 0.2
ATG4B-214ENST00000465399 FANCBQ8NB91 859 aa16.27■□□□□ 0.2
ATG4B-214ENST00000465399 NEK9Q8TD19 979 aa16.27■□□□□ 0.2
ATG4B-214ENST00000465399 DNAJB3Q8WWF6 145 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms