RNA–Protein interactions for RNA: ENST00000464576.1

PTPN18-209, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 5

Gene PTPN18, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-209	ENST00000464576	NLRC5	Q86WI3	1866 aa		10.85	□□□□□ -0.67
PTPN18-209	ENST00000464576	PIK3CD	O00329	1044 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	PDE4A	P27815	886 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	SMARCA1	P28370	1054 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	TCF7	P36402	384 aa	Predicted RBP	10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	HTRA4	P83105	476 aa	Predicted RBP	10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	PPFIA1	Q13136	1202 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	MTMR1	Q13613	665 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	TAF2	Q6P1X5	1199 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	TRIM50	Q86XT4	487 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	TMEM192	Q8IY95	271 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	FIBCD1	Q8N539	461 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	BANK1	Q8NDB2	785 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	SEPT1	Q8WYJ6	367 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	MAP4K1	Q92918	833 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	TOP1MT	Q969P6	601 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	GPRASP2	Q96D09	838 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	TMEM87B	Q96K49	555 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	MYL10	Q9BUA6	226 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	EPHX3	Q9H6B9	360 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	AZI2	Q9H6S1	392 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	BCAS3	Q9H6U6	928 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	PKD2L1	Q9P0L9	805 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	RWDD3	Q9Y3V2	267 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	SLC12A7	Q9Y666	1083 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576	FRMPD4	Q14CM0	1322 aa		10.84	□□□□□ -0.67
PTPN18-209	ENST00000464576		M0QZ92	97 aa		10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	RPLP2	P05387	115 aa	Known RBP	10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	MARK3	P27448	753 aa		10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	CTNNB1	P35222	781 aa		10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	IGBP1	P78318	339 aa		10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	CSPP1	Q1MSJ5	1256 aa		10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	SLC35G1	Q2M3R5	365 aa		10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	LEXM	Q3ZCV2	418 aa		10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	HEATR3	Q7Z4Q2	680 aa		10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	MB21D2	Q8IYB1	491 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	CCDC82	Q8N4S0	544 aa		10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	LMBR1	Q8WVP7	490 aa		10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	MTA3	Q9BTC8	594 aa		10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	SMARCAD1	Q9H4L7	1026 aa		10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	LY9	Q9HBG7	655 aa		10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	TUBE1	Q9UJT0	475 aa		10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	RALGAPA2	Q2PPJ7	1873 aa		10.83	□□□□□ -0.68
PTPN18-209	ENST00000464576	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576		H3BNC9	293 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	MEIS2	O14770	477 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	MAFG	O15525	162 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	NCK2	O43639	380 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	GHR	P10912	638 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	HOXC8	P31273	242 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	PLA2G5	P39877	138 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	ANTXR2	P58335	489 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	GRIK4	Q16099	956 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	RNF20	Q5VTR2	975 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	IER5	Q5VY09	327 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	GJD3	Q8N144	294 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	CMTR1	Q8N1G2	835 aa	Known RBP	10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	SP7	Q8TDD2	431 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	UIMC1	Q96RL1	719 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	SDF4	Q9BRK5	362 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	LRFN3	Q9BTN0	628 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	C11orf84	Q9BUA3	381 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	NSUN3	Q9H649	340 aa	Known RBP	10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	TRPC6	Q9Y210	931 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	TAF6L	Q9Y6J9	622 aa		10.82	□□□□□ -0.68
PTPN18-209	ENST00000464576	RRN3P2	A6NIE6	340 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576		H3BQ06	376 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	PLEKHA8P1	O95397	391 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	RB1	P06400	928 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	ALAD	P13716	330 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	RXRA	P19793	462 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	ZNF76	P36508	570 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	IRX6	P78412	446 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	SEMA3F	Q13275	785 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	BTG3	Q14201	252 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	UBE2S	Q16763	222 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	FAM26D	Q5JW98	314 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	SRBD1	Q8N5C6	995 aa	Known RBP	10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	FANCB	Q8NB91	859 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	DNAJB3	Q8WWF6	145 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	PPP2R3C	Q969Q6	453 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	FAM49A	Q9H0Q0	323 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	ANO2	Q9NQ90	1003 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	CLDND1	Q9NY35	253 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	PCDHA6	Q9UN73	950 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	PCDHA8	Q9Y5H6	950 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	MYO7A	Q13402	2215 aa		10.81	□□□□□ -0.68
PTPN18-209	ENST00000464576	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	10.8	□□□□□ -0.68
PTPN18-209	ENST00000464576	hCG_1642624	A0A1W2PR95	340 aa		10.8	□□□□□ -0.68
PTPN18-209	ENST00000464576	SH2B2	O14492	632 aa	Predicted RBP	10.8	□□□□□ -0.68
PTPN18-209	ENST00000464576	GPR37L1	O60883	481 aa		10.8	□□□□□ -0.68
PTPN18-209	ENST00000464576	ATP9A	O75110	1047 aa		10.8	□□□□□ -0.68
PTPN18-209	ENST00000464576	CHRNA1	P02708	482 aa		10.8	□□□□□ -0.68
PTPN18-209	ENST00000464576	KCNA2	P16389	499 aa		10.8	□□□□□ -0.68
PTPN18-209	ENST00000464576	LIFR	P42702	1097 aa		10.8	□□□□□ -0.68
PTPN18-209	ENST00000464576	NAPA	P54920	295 aa		10.8	□□□□□ -0.68
PTPN18-209	ENST00000464576	FGD1	P98174	961 aa		10.8	□□□□□ -0.68
PTPN18-209	ENST00000464576	TCEAL5	Q5H9L2	206 aa		10.8	□□□□□ -0.68
PTPN18-209	ENST00000464576	RUFY4	Q6ZNE9	571 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms