RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 KRT25Q7Z3Z0 450 aa19.34■□□□□ 0.69
VPS52-215ENST00000464425 ZNF577Q9BSK1 485 aa19.34■□□□□ 0.69
VPS52-215ENST00000464425 GTF2IRD1Q9UHL9 959 aa19.34■□□□□ 0.69
VPS52-215ENST00000464425 CCDC194A0A1B0GVG4 234 aa19.33■□□□□ 0.68
VPS52-215ENST00000464425 EPHB4P54760 987 aa19.33■□□□□ 0.68
VPS52-215ENST00000464425 CCL23P55773 120 aa19.33■□□□□ 0.68
VPS52-215ENST00000464425 ACTR2P61160 394 aa19.33■□□□□ 0.68
VPS52-215ENST00000464425 HMGN5P82970 282 aaKnown RBP19.33■□□□□ 0.68
VPS52-215ENST00000464425 ZNF200P98182 395 aaPredicted RBP19.33■□□□□ 0.68
VPS52-215ENST00000464425 SETQ01105 290 aaPredicted RBP19.33■□□□□ 0.68
VPS52-215ENST00000464425 FPGSQ05932 587 aa19.33■□□□□ 0.68
VPS52-215ENST00000464425 TRIM29Q14134 588 aa19.33■□□□□ 0.68
VPS52-215ENST00000464425 INF2Q27J81 1249 aa19.33■□□□□ 0.68
VPS52-215ENST00000464425 MFSD5Q6N075 450 aa19.33■□□□□ 0.68
VPS52-215ENST00000464425 PIK3AP1Q6ZUJ8 805 aa19.33■□□□□ 0.68
VPS52-215ENST00000464425 HSCBQ8IWL3 235 aa19.33■□□□□ 0.68
VPS52-215ENST00000464425 DHX15O43143 795 aaKnown RBP19.32■□□□□ 0.68
VPS52-215ENST00000464425 CCNE2O96020 404 aa19.32■□□□□ 0.68
VPS52-215ENST00000464425 SMIM10L2AP0DMW4 78 aa19.32■□□□□ 0.68
VPS52-215ENST00000464425 SMIM10L2BP0DMW5 78 aa19.32■□□□□ 0.68
VPS52-215ENST00000464425 CSF2RAP15509 400 aa19.32■□□□□ 0.68
VPS52-215ENST00000464425 MARK3P27448 753 aa19.32■□□□□ 0.68
VPS52-215ENST00000464425 KRT2P35908 639 aa19.32■□□□□ 0.68
VPS52-215ENST00000464425 GUCY1B3Q02153 619 aa19.32■□□□□ 0.68
VPS52-215ENST00000464425 NR5A1Q13285 461 aa19.32■□□□□ 0.68
VPS52-215ENST00000464425 HIC1Q14526 733 aa19.32■□□□□ 0.68
VPS52-215ENST00000464425 KRT40Q6A162 431 aa19.32■□□□□ 0.68
VPS52-215ENST00000464425 TDHQ8IZJ6 230 aa19.32■□□□□ 0.68
VPS52-215ENST00000464425 TMEM199Q8N511 208 aa19.32■□□□□ 0.68
VPS52-215ENST00000464425 GLG1Q92896 1179 aa19.32■□□□□ 0.68
VPS52-215ENST00000464425 LENG9Q96B70 501 aa19.32■□□□□ 0.68
VPS52-215ENST00000464425 RNPEPQ9H4A4 650 aa19.32■□□□□ 0.68
VPS52-215ENST00000464425 ZNF215Q9UL58 517 aaPredicted RBP19.32■□□□□ 0.68
VPS52-215ENST00000464425 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.32■□□□□ 0.68
VPS52-215ENST00000464425 LTBP2Q14767 1821 aa19.32■□□□□ 0.68
VPS52-215ENST00000464425 TDP2O95551 362 aa19.31■□□□□ 0.68
VPS52-215ENST00000464425 SHHQ15465 462 aa19.31■□□□□ 0.68
VPS52-215ENST00000464425 LETM2Q2VYF4 491 aa19.31■□□□□ 0.68
VPS52-215ENST00000464425 EARS2Q5JPH6 523 aaKnown RBP19.31■□□□□ 0.68
VPS52-215ENST00000464425 C9orf50Q5SZB4 431 aa19.31■□□□□ 0.68
VPS52-215ENST00000464425 GJA10Q969M2 543 aa19.31■□□□□ 0.68
VPS52-215ENST00000464425 INTS4Q96HW7 963 aaKnown RBP19.31■□□□□ 0.68
VPS52-215ENST00000464425 CTAGE1Q96RT6 745 aa19.31■□□□□ 0.68
VPS52-215ENST00000464425 PCYT2Q99447 389 aa19.31■□□□□ 0.68
VPS52-215ENST00000464425 WNT8AQ9H1J5 351 aa19.31■□□□□ 0.68
VPS52-215ENST00000464425 BRMS1Q9HCU9 246 aa19.31■□□□□ 0.68
VPS52-215ENST00000464425 A0A1W2PPC1 479 aa19.3■□□□□ 0.68
VPS52-215ENST00000464425 C17orf102A2RUQ5 167 aa19.3■□□□□ 0.68
VPS52-215ENST00000464425 FAM205CA6NFA0 338 aa19.3■□□□□ 0.68
VPS52-215ENST00000464425 BTBD18B2RXH4 712 aa19.3■□□□□ 0.68
VPS52-215ENST00000464425 MSH4O15457 936 aa19.3■□□□□ 0.68
VPS52-215ENST00000464425 MMP1P03956 469 aa19.3■□□□□ 0.68
VPS52-215ENST00000464425 ACRP10323 421 aa19.3■□□□□ 0.68
VPS52-215ENST00000464425 FAM184AQ8NB25 1140 aa19.3■□□□□ 0.68
VPS52-215ENST00000464425 RETREG2Q8NC44 543 aa19.3■□□□□ 0.68
VPS52-215ENST00000464425 SCLYQ96I15 445 aa19.3■□□□□ 0.68
VPS52-215ENST00000464425 SMARCAD1Q9H4L7 1026 aa19.3■□□□□ 0.68
VPS52-215ENST00000464425 AZI2Q9H6S1 392 aa19.3■□□□□ 0.68
VPS52-215ENST00000464425 TBC1D22BQ9NU19 505 aa19.3■□□□□ 0.68
VPS52-215ENST00000464425 SETD4Q9NVD3 440 aa19.3■□□□□ 0.68
VPS52-215ENST00000464425 CYP3A7-CYP3A51PA0A087WV96 503 aa19.29■□□□□ 0.68
VPS52-215ENST00000464425 LGR5O75473 907 aa19.29■□□□□ 0.68
VPS52-215ENST00000464425 CYP3A7P24462 503 aa19.29■□□□□ 0.68
VPS52-215ENST00000464425 PPIGQ13427 754 aaKnown RBP eCLIP19.29■□□□□ 0.683e-7■■■□□ 18.6
VPS52-215ENST00000464425 Q4G0T1 1027 aa19.29■□□□□ 0.68
VPS52-215ENST00000464425 DIS3L2Q8IYB7 885 aaKnown RBP19.29■□□□□ 0.68
VPS52-215ENST00000464425 ATP6V0A1Q93050 837 aa19.29■□□□□ 0.68
VPS52-215ENST00000464425 C8orf76Q96K31 380 aa19.29■□□□□ 0.68
VPS52-215ENST00000464425 ERAP1Q9NZ08 941 aa19.29■□□□□ 0.68
VPS52-215ENST00000464425 DDX25Q9UHL0 483 aaKnown RBP19.29■□□□□ 0.68
VPS52-215ENST00000464425 BACH1O14867 736 aa19.28■□□□□ 0.68
VPS52-215ENST00000464425 ATG7O95352 703 aa19.28■□□□□ 0.68
VPS52-215ENST00000464425 STAT5BP51692 787 aa19.28■□□□□ 0.68
VPS52-215ENST00000464425 BFSP2Q13515 415 aa19.28■□□□□ 0.68
VPS52-215ENST00000464425 ABHD15Q6UXT9 468 aa19.28■□□□□ 0.68
VPS52-215ENST00000464425 C16orf59Q7L2K0 433 aa19.28■□□□□ 0.68
VPS52-215ENST00000464425 NEK8Q86SG6 692 aa19.28■□□□□ 0.68
VPS52-215ENST00000464425 DHX38Q92620 1227 aaKnown RBP19.28■□□□□ 0.68
VPS52-215ENST00000464425 TNFRSF25Q93038 417 aa19.28■□□□□ 0.68
VPS52-215ENST00000464425 KIF3AQ9Y496 699 aa19.28■□□□□ 0.68
VPS52-215ENST00000464425 EMSYQ7Z589 1322 aa19.27■□□□□ 0.68
VPS52-215ENST00000464425 LAMA3Q16787 3333 aa19.27■□□□□ 0.68
VPS52-215ENST00000464425 TREHO43280 583 aa19.27■□□□□ 0.68
VPS52-215ENST00000464425 CCNT1O60563 726 aaKnown RBP19.27■□□□□ 0.68
VPS52-215ENST00000464425 PTK7Q13308 1070 aa19.27■□□□□ 0.68
VPS52-215ENST00000464425 SWSAP1Q6NVH7 229 aa19.27■□□□□ 0.68
VPS52-215ENST00000464425 MIS18BP1Q6P0N0 1132 aa19.27■□□□□ 0.68
VPS52-215ENST00000464425 MOXD1Q6UVY6 613 aa19.27■□□□□ 0.68
VPS52-215ENST00000464425 SLC5A5Q92911 643 aa19.27■□□□□ 0.68
VPS52-215ENST00000464425 WNT8BQ93098 351 aa19.27■□□□□ 0.68
VPS52-215ENST00000464425 MBOAT7Q96N66 472 aa19.27■□□□□ 0.68
VPS52-215ENST00000464425 TCEAL9Q9UHQ7 104 aa19.27■□□□□ 0.68
VPS52-215ENST00000464425 SMC3Q9UQE7 1217 aa19.27■□□□□ 0.68
VPS52-215ENST00000464425 PITPNM1O00562 1244 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 CHMP2AO43633 222 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 SLC37A4O43826 429 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 GAS7O60861 476 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 IQCF3P0C7M6 154 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 GNAT1P11488 350 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 HOXC8P31273 242 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms