RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 ERVK-9P63128 1117 aa16.19■□□□□ 0.18
COL5A1-205ENST00000464187 ERVK-24P63145 666 aa16.19■□□□□ 0.18
COL5A1-205ENST00000464187 KRT31Q15323 416 aa16.19■□□□□ 0.18
COL5A1-205ENST00000464187 ADSSL1Q8N142 457 aa16.19■□□□□ 0.18
COL5A1-205ENST00000464187 KIF18AQ8NI77 898 aa16.19■□□□□ 0.18
COL5A1-205ENST00000464187 NSUN6Q8TEA1 469 aaKnown RBP16.19■□□□□ 0.18
COL5A1-205ENST00000464187 MAP7D2Q96T17 732 aa16.19■□□□□ 0.18
COL5A1-205ENST00000464187 R3HDMLQ9H3Y0 253 aa16.19■□□□□ 0.18
COL5A1-205ENST00000464187 MAPK8IP1Q9UQF2 711 aa16.19■□□□□ 0.18
COL5A1-205ENST00000464187 RHOBTB3O94955 611 aa16.18■□□□□ 0.18
COL5A1-205ENST00000464187 ARP10275 920 aa16.18■□□□□ 0.18
COL5A1-205ENST00000464187 MYCLP12524 364 aaPredicted RBP16.18■□□□□ 0.18
COL5A1-205ENST00000464187 COPB2P35606 906 aa16.18■□□□□ 0.18
COL5A1-205ENST00000464187 SPIRE1Q08AE8 756 aa16.18■□□□□ 0.18
COL5A1-205ENST00000464187 FILIP1LQ4L180 1135 aa16.18■□□□□ 0.18
COL5A1-205ENST00000464187 REXO1L1PQ8IX06 675 aa16.18■□□□□ 0.18
COL5A1-205ENST00000464187 WDR11Q9BZH6 1224 aa16.18■□□□□ 0.18
COL5A1-205ENST00000464187 PDCL3Q9H2J4 239 aa16.18■□□□□ 0.18
COL5A1-205ENST00000464187 TLL2Q9Y6L7 1015 aa16.18■□□□□ 0.18
COL5A1-205ENST00000464187 RBBP6Q7Z6E9 1792 aaKnown RBP16.18■□□□□ 0.18
COL5A1-205ENST00000464187 TESPA1A2RU30 521 aaPredicted RBP16.17■□□□□ 0.18
COL5A1-205ENST00000464187 STX10O60499 249 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 NR3C2P08235 984 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 BCRP11274 1271 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 CCT6AP40227 531 aaKnown RBP16.17■□□□□ 0.18
COL5A1-205ENST00000464187 SEMA3FQ13275 785 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 KRT79Q5XKE5 535 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 ANKRD13CQ8N6S4 541 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 SNX29Q8TEQ0 813 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 CALML4Q96GE6 196 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 ZNF577Q9BSK1 485 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 KCNH7Q9NS40 1196 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 UBIAD1Q9Y5Z9 338 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 TRIM49BA6NDI0 452 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 AKR1B15C9JRZ8 316 aaPredicted RBP16.17■□□□□ 0.18
COL5A1-205ENST00000464187 TOMM70O94826 608 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 COPB1P53618 953 aaKnown RBP16.17■□□□□ 0.18
COL5A1-205ENST00000464187 SPAG1Q07617 926 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 NCBP1Q09161 790 aaKnown RBP16.17■□□□□ 0.18
COL5A1-205ENST00000464187 SYCP1Q15431 976 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 TCP11X2Q5H9J9 407 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 SYT10Q6XYQ8 523 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 NIPA1Q7RTP0 329 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 MTERF4Q7Z6M4 381 aaKnown RBP16.17■□□□□ 0.18
COL5A1-205ENST00000464187 VSIG10LQ86VR7 867 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 GIMAP8Q8ND71 665 aaPredicted RBP16.17■□□□□ 0.18
COL5A1-205ENST00000464187 GPRC5AQ8NFJ5 357 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 ANKRD7Q92527 254 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 SLC5A5Q92911 643 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 PARK7Q99497 189 aaKnown RBP16.17■□□□□ 0.18
COL5A1-205ENST00000464187 NUDT12Q9BQG2 462 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 JADE2Q9NQC1 790 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 ABT1Q9ULW3 272 aaKnown RBP16.17■□□□□ 0.18
COL5A1-205ENST00000464187 PPP2R2CQ9Y2T4 447 aa16.17■□□□□ 0.18
COL5A1-205ENST00000464187 ITIH6Q6UXX5 1313 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 MANSC4A6NHS7 340 aaPredicted RBP16.16■□□□□ 0.18
COL5A1-205ENST00000464187 LRRC10BA6NIK2 292 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 KCNJ18B7U540 433 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 IPO5O00410 1097 aaKnown RBP16.16■□□□□ 0.18
COL5A1-205ENST00000464187 PSMD10O75832 226 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 SLC10A3P09131 477 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 CCND2P30279 289 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 GCLCP48506 637 aaPredicted RBP16.16■□□□□ 0.18
COL5A1-205ENST00000464187 PMS1P54277 932 aaKnown RBP16.16■□□□□ 0.18
COL5A1-205ENST00000464187 CNTN2Q02246 1040 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 RBL2Q08999 1139 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 MTMR1Q13613 665 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 KCNJ12Q14500 433 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 LRCH2Q5VUJ6 765 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 XRRA1Q6P2D8 792 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 DNERQ8NFT8 737 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 PANX2Q96RD6 677 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 C7orf25Q9BPX7 421 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 TRIM9Q9C026 710 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 MROH8Q9H579 483 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 VAV3Q9UKW4 847 aa16.16■□□□□ 0.18
COL5A1-205ENST00000464187 TMEM88BA6NKF7 163 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 POTEB2H3BUK9 544 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 ZSCAN12O43309 604 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 TUBB4AP04350 444 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 GRB10Q13322 594 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 WDR78Q5VTH9 848 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 NCAPH2Q6IBW4 605 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 TRIM65Q6PJ69 517 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 TOGARAM2Q6ZUX3 1019 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL5A1-205ENST00000464187 OTOP1Q7RTM1 612 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 PPFIBP1Q86W92 1011 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 IRF2BP1Q8IU81 584 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 CDK5RAP3Q96JB5 506 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 PORCNQ9H237 461 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 TAB2Q9NYJ8 693 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 ASTN1O14525 1302 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 IGF2BP3O00425 579 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL5A1-205ENST00000464187 GAS7O60861 476 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 CCNA1P78396 465 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 SHCBP1Q8NEM2 672 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 PNMA5Q96PV4 448 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 VPS16Q9H269 839 aa16.15■□□□□ 0.18
COL5A1-205ENST00000464187 EFCC1Q9HA90 598 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms