RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 NSUN3Q9H649 340 aaKnown RBP11.82□□□□□ -0.52
TMEM54-203ENST00000463914 ZNF215Q9UL58 517 aaPredicted RBP11.82□□□□□ -0.52
TMEM54-203ENST00000463914 ERICH2A1L162 156 aa11.81□□□□□ -0.52
TMEM54-203ENST00000463914 STAM2O75886 525 aa11.81□□□□□ -0.52
TMEM54-203ENST00000463914 CHRNA1P02708 482 aa11.81□□□□□ -0.52
TMEM54-203ENST00000463914 LINC00271P0C7V0 271 aa11.81□□□□□ -0.52
TMEM54-203ENST00000463914 GNAT1P11488 350 aa11.81□□□□□ -0.52
TMEM54-203ENST00000463914 ZP2Q05996 745 aa11.81□□□□□ -0.52
TMEM54-203ENST00000463914 TRAF1Q13077 416 aa11.81□□□□□ -0.52
TMEM54-203ENST00000463914 COL19A1Q14993 1142 aa11.81□□□□□ -0.52
TMEM54-203ENST00000463914 FAM26DQ5JW98 314 aa11.81□□□□□ -0.52
TMEM54-203ENST00000463914 TTC22Q5TAA0 569 aa11.81□□□□□ -0.52
TMEM54-203ENST00000463914 USP17L6PQ6QN14 398 aa11.81□□□□□ -0.52
TMEM54-203ENST00000463914 RALYLQ86SE5 291 aaKnown RBP11.81□□□□□ -0.52
TMEM54-203ENST00000463914 RPAINQ86UA6 219 aa11.81□□□□□ -0.52
TMEM54-203ENST00000463914 APBB2Q92870 758 aa11.81□□□□□ -0.52
TMEM54-203ENST00000463914 UIMC1Q96RL1 719 aa11.81□□□□□ -0.52
TMEM54-203ENST00000463914 CLDND1Q9NY35 253 aa11.81□□□□□ -0.52
TMEM54-203ENST00000463914 U3KPZ7 1027 aaPredicted RBP11.81□□□□□ -0.52
TMEM54-203ENST00000463914 ADGRA3Q8IWK6 1321 aa11.81□□□□□ -0.52
TMEM54-203ENST00000463914 PRR33A8MZF0 331 aa11.8□□□□□ -0.52
TMEM54-203ENST00000463914 E7EWF7 191 aa11.8□□□□□ -0.52
TMEM54-203ENST00000463914 GRM6O15303 877 aa11.8□□□□□ -0.52
TMEM54-203ENST00000463914 MARK3P27448 753 aa11.8□□□□□ -0.52
TMEM54-203ENST00000463914 TCF7P36402 384 aaPredicted RBP11.8□□□□□ -0.52
TMEM54-203ENST00000463914 MGAT3Q09327 533 aa11.8□□□□□ -0.52
TMEM54-203ENST00000463914 LPIN1Q14693 890 aa11.8□□□□□ -0.52
TMEM54-203ENST00000463914 CLUL1Q15846 466 aa11.8□□□□□ -0.52
TMEM54-203ENST00000463914 PCNX4Q63HM2 1172 aa11.8□□□□□ -0.52
TMEM54-203ENST00000463914 CATIPQ7Z7H3 387 aa11.8□□□□□ -0.52
TMEM54-203ENST00000463914 MB21D2Q8IYB1 491 aaPredicted RBP11.8□□□□□ -0.52
TMEM54-203ENST00000463914 FIBCD1Q8N539 461 aa11.8□□□□□ -0.52
TMEM54-203ENST00000463914 NCOA7Q8NI08 942 aa11.8□□□□□ -0.52
TMEM54-203ENST00000463914 SMARCC2Q8TAQ2 1214 aa11.8□□□□□ -0.52
TMEM54-203ENST00000463914 ZBTB10Q96DT7 871 aa11.8□□□□□ -0.52
TMEM54-203ENST00000463914 RC3H2Q9HBD1 1191 aaKnown RBP11.8□□□□□ -0.52
TMEM54-203ENST00000463914 PKD2L1Q9P0L9 805 aa11.8□□□□□ -0.52
TMEM54-203ENST00000463914 ZNF318Q5VUA4 2279 aa11.8□□□□□ -0.52
TMEM54-203ENST00000463914 MEIS2O14770 477 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 DCXO43602 365 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 ATP9AO75110 1047 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 TBX10O75333 385 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 PLEKHA8P1O95397 391 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 KCNA2P16389 499 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 CHMLP26374 656 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 GTF2F1P35269 517 aaKnown RBP eCLIP11.79□□□□□ -0.52
TMEM54-203ENST00000463914 LTBRP36941 435 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 DLX2Q07687 328 aaPredicted RBP11.79□□□□□ -0.52
TMEM54-203ENST00000463914 PPFIA1Q13136 1202 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 COL9A3Q14050 684 aaPredicted RBP11.79□□□□□ -0.52
TMEM54-203ENST00000463914 SART3Q15020 963 aaKnown RBP11.79□□□□□ -0.52
TMEM54-203ENST00000463914 PUS10Q3MIT2 529 aaKnown RBP11.79□□□□□ -0.52
TMEM54-203ENST00000463914 ZNF654Q8IZM8 581 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 LINC01599Q8WXQ3 324 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 IL17RAQ96F46 866 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 SENP7Q9BQF6 1050 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 SPZ1Q9BXG8 430 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 EHMT1Q9H9B1 1298 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 TUBE1Q9UJT0 475 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 NRCAMQ92823 1304 aa11.79□□□□□ -0.52
TMEM54-203ENST00000463914 GSTTP1A0A1W2PQM5 241 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 C5orf67F2Z3F1 127 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 PIK3CDO00329 1044 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 DDAH1O94760 285 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 ALADP13716 330 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 ITGB5P18084 799 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 HYAL1Q12794 435 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 GRIK4Q16099 956 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 TAF2Q6P1X5 1199 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 NLRX1Q86UT6 975 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 RAB11FIP4Q86YS3 637 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 CTCFLQ8NI51 663 aaPredicted RBP11.78□□□□□ -0.52
TMEM54-203ENST00000463914 IGDCC4Q8TDY8 1250 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 DNAJB3Q8WWF6 145 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 CUL5Q93034 780 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 RRP36Q96EU6 259 aaKnown RBP11.78□□□□□ -0.52
TMEM54-203ENST00000463914 C11orf84Q9BUA3 381 aaPredicted RBP11.78□□□□□ -0.52
TMEM54-203ENST00000463914 AGO3Q9H9G7 860 aaKnown RBP11.78□□□□□ -0.52
TMEM54-203ENST00000463914 LY9Q9HBG7 655 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 CDY2AQ9Y6F7 541 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 PIEZO1Q92508 2521 aa11.78□□□□□ -0.52
TMEM54-203ENST00000463914 TECTAO75443 2155 aa11.77□□□□□ -0.53
TMEM54-203ENST00000463914 PLXNA4Q9HCM2 1894 aa11.77□□□□□ -0.53
TMEM54-203ENST00000463914 hCG_1642624A0A1W2PR95 340 aa11.77□□□□□ -0.53
TMEM54-203ENST00000463914 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
TMEM54-203ENST00000463914 MBLAC1A4D2B0 266 aaPredicted RBP11.77□□□□□ -0.53
TMEM54-203ENST00000463914 LINC01565O15544 149 aa11.77□□□□□ -0.53
TMEM54-203ENST00000463914 RXRAP19793 462 aa11.77□□□□□ -0.53
TMEM54-203ENST00000463914 IRS1P35568 1242 aa11.77□□□□□ -0.53
TMEM54-203ENST00000463914 BMPR1AP36894 532 aa11.77□□□□□ -0.53
TMEM54-203ENST00000463914 IGBP1P78318 339 aa11.77□□□□□ -0.53
TMEM54-203ENST00000463914 BTG3Q14201 252 aaPredicted RBP11.77□□□□□ -0.53
TMEM54-203ENST00000463914 UBE2SQ16763 222 aa11.77□□□□□ -0.53
TMEM54-203ENST00000463914 CSPP1Q1MSJ5 1256 aa11.77□□□□□ -0.53
TMEM54-203ENST00000463914 CTC1Q2NKJ3 1217 aa11.77□□□□□ -0.53
TMEM54-203ENST00000463914 FBXO47Q5MNV8 452 aa11.77□□□□□ -0.53
TMEM54-203ENST00000463914 MARCH8Q5T0T0 291 aa11.77□□□□□ -0.53
TMEM54-203ENST00000463914 XRRA1Q6P2D8 792 aa11.77□□□□□ -0.53
TMEM54-203ENST00000463914 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
TMEM54-203ENST00000463914 ADHFE1Q8IWW8 467 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms