RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 PKD2L1Q9P0L9 805 aa14.93□□□□□ -0.02
HDAC1-203ENST00000463172 SLC9A2Q9UBY0 812 aa14.93□□□□□ -0.02
HDAC1-203ENST00000463172 MYO9BQ13459 2157 aa14.92□□□□□ -0.02
HDAC1-203ENST00000463172 NFASCO94856 1347 aa14.92□□□□□ -0.02
HDAC1-203ENST00000463172 NRCAMQ92823 1304 aa14.92□□□□□ -0.02
HDAC1-203ENST00000463172 KIF28PB7ZC32 967 aa14.92□□□□□ -0.02
HDAC1-203ENST00000463172 EFCAB14O75071 495 aa14.92□□□□□ -0.02
HDAC1-203ENST00000463172 ATP9AO75110 1047 aa14.92□□□□□ -0.02
HDAC1-203ENST00000463172 DEXIO95424 95 aa14.92□□□□□ -0.02
HDAC1-203ENST00000463172 RPLP2P05387 115 aaKnown RBP14.92□□□□□ -0.02
HDAC1-203ENST00000463172 ATP2A2P16615 1042 aaKnown RBP14.92□□□□□ -0.02
HDAC1-203ENST00000463172 NLRP5P59047 1200 aa14.92□□□□□ -0.02
HDAC1-203ENST00000463172 NTRK3Q16288 839 aa14.92□□□□□ -0.02
HDAC1-203ENST00000463172 SERINC5Q86VE9 423 aa14.92□□□□□ -0.02
HDAC1-203ENST00000463172 PHOSPHO2Q8TCD6 241 aa14.92□□□□□ -0.02
HDAC1-203ENST00000463172 PGBD1Q96JS3 809 aa14.92□□□□□ -0.02
HDAC1-203ENST00000463172 SLKQ9H2G2 1235 aaPredicted RBP14.92□□□□□ -0.02
HDAC1-203ENST00000463172 NCOA5Q9HCD5 579 aaKnown RBP14.92□□□□□ -0.02
HDAC1-203ENST00000463172 TMEM260Q9NX78 707 aa14.92□□□□□ -0.02
HDAC1-203ENST00000463172 MEIS1O00470 390 aa14.91□□□□□ -0.02
HDAC1-203ENST00000463172 CYP3A4P08684 503 aa14.91□□□□□ -0.02
HDAC1-203ENST00000463172 XBP1P17861 261 aa14.91□□□□□ -0.02
HDAC1-203ENST00000463172 THPOP40225 353 aa14.91□□□□□ -0.02
HDAC1-203ENST00000463172 PKN1Q16512 942 aa14.91□□□□□ -0.02
HDAC1-203ENST00000463172 CNKSR3Q6P9H4 555 aa14.91□□□□□ -0.02
HDAC1-203ENST00000463172 RSPH3Q86UC2 560 aa14.91□□□□□ -0.02
HDAC1-203ENST00000463172 PBX4Q9BYU1 374 aa14.91□□□□□ -0.02
HDAC1-203ENST00000463172 RNPEPQ9H4A4 650 aa14.91□□□□□ -0.02
HDAC1-203ENST00000463172 BCAS3Q9H6U6 928 aa14.91□□□□□ -0.02
HDAC1-203ENST00000463172 SLC28A3Q9HAS3 691 aa14.91□□□□□ -0.02
HDAC1-203ENST00000463172 CXXC1Q9P0U4 656 aaPredicted RBP14.91□□□□□ -0.02
HDAC1-203ENST00000463172 RSPH10B2B2RC85 870 aa14.9□□□□□ -0.02
HDAC1-203ENST00000463172 RSPH10BP0C881 870 aa14.9□□□□□ -0.02
HDAC1-203ENST00000463172 PPFIA1Q13136 1202 aa14.9□□□□□ -0.02
HDAC1-203ENST00000463172 STK3Q13188 491 aa14.9□□□□□ -0.02
HDAC1-203ENST00000463172 IKBKEQ14164 716 aa14.9□□□□□ -0.02
HDAC1-203ENST00000463172 GALNT17Q6IS24 598 aa14.9□□□□□ -0.02
HDAC1-203ENST00000463172 TAF2Q6P1X5 1199 aa14.9□□□□□ -0.02
HDAC1-203ENST00000463172 PLA2G4DQ86XP0 818 aa14.9□□□□□ -0.02
HDAC1-203ENST00000463172 TRIM50Q86XT4 487 aa14.9□□□□□ -0.02
HDAC1-203ENST00000463172 DHX38Q92620 1227 aaKnown RBP14.9□□□□□ -0.02
HDAC1-203ENST00000463172 GUCD1Q96NT3 240 aa14.9□□□□□ -0.02
HDAC1-203ENST00000463172 CTAGE1Q96RT6 745 aa14.9□□□□□ -0.02
HDAC1-203ENST00000463172 CDX2Q99626 313 aaPredicted RBP14.9□□□□□ -0.02
HDAC1-203ENST00000463172 ZNF576Q9H609 170 aa14.9□□□□□ -0.02
HDAC1-203ENST00000463172 AGO4Q9HCK5 861 aaKnown RBP14.9□□□□□ -0.02
HDAC1-203ENST00000463172 PCDHA11Q9Y5I1 949 aa14.9□□□□□ -0.02
HDAC1-203ENST00000463172 GBF1Q92538 1859 aa14.9□□□□□ -0.02
HDAC1-203ENST00000463172 TET1Q8NFU7 2136 aa14.9□□□□□ -0.02
HDAC1-203ENST00000463172 ABHD14A-ACY1A0A1B0GW23 586 aa14.89□□□□□ -0.03
HDAC1-203ENST00000463172 GSTTP1A0A1W2PQM5 241 aa14.89□□□□□ -0.03
HDAC1-203ENST00000463172 RRN3P2A6NIE6 340 aa14.89□□□□□ -0.03
HDAC1-203ENST00000463172 GRXCR1A8MXD5 290 aa14.89□□□□□ -0.03
HDAC1-203ENST00000463172 TREHO43280 583 aa14.89□□□□□ -0.03
HDAC1-203ENST00000463172 CXCL10P02778 98 aa14.89□□□□□ -0.03
HDAC1-203ENST00000463172 FOSL2P15408 326 aa14.89□□□□□ -0.03
HDAC1-203ENST00000463172 HOXC8P31273 242 aa14.89□□□□□ -0.03
HDAC1-203ENST00000463172 SLC26A2P50443 739 aa14.89□□□□□ -0.03
HDAC1-203ENST00000463172 ZNF200P98182 395 aaPredicted RBP14.89□□□□□ -0.03
HDAC1-203ENST00000463172 ZNF618Q5T7W0 954 aa14.89□□□□□ -0.03
HDAC1-203ENST00000463172 FAM160B1Q5W0V3 765 aa14.89□□□□□ -0.03
HDAC1-203ENST00000463172 WASF1Q92558 559 aa14.89□□□□□ -0.03
HDAC1-203ENST00000463172 GAS2L1Q99501 681 aaPredicted RBP14.89□□□□□ -0.03
HDAC1-203ENST00000463172 ZNF577Q9BSK1 485 aa14.89□□□□□ -0.03
HDAC1-203ENST00000463172 TTYH1Q9H313 450 aaPredicted RBP14.89□□□□□ -0.03
HDAC1-203ENST00000463172 TBC1D22BQ9NU19 505 aa14.89□□□□□ -0.03
HDAC1-203ENST00000463172 SETD4Q9NVD3 440 aa14.89□□□□□ -0.03
HDAC1-203ENST00000463172 VPS54Q9P1Q0 977 aa14.89□□□□□ -0.03
HDAC1-203ENST00000463172 MYH9P35579 1960 aaKnown RBP14.88□□□□□ -0.03
HDAC1-203ENST00000463172 LGR5O75473 907 aa14.88□□□□□ -0.03
HDAC1-203ENST00000463172 ARP10275 920 aa14.88□□□□□ -0.03
HDAC1-203ENST00000463172 STAT5BP51692 787 aa14.88□□□□□ -0.03
HDAC1-203ENST00000463172 ACTR2P61160 394 aa14.88□□□□□ -0.03
HDAC1-203ENST00000463172 TRIM71Q2Q1W2 868 aaKnown RBP14.88□□□□□ -0.03
HDAC1-203ENST00000463172 MIS18BP1Q6P0N0 1132 aa14.88□□□□□ -0.03
HDAC1-203ENST00000463172 PLPPR4Q7Z2D5 763 aa14.88□□□□□ -0.03
HDAC1-203ENST00000463172 CYP2W1Q8TAV3 490 aa14.88□□□□□ -0.03
HDAC1-203ENST00000463172 LMBR1Q8WVP7 490 aa14.88□□□□□ -0.03
HDAC1-203ENST00000463172 PCDHA4Q9UN74 947 aa14.88□□□□□ -0.03
HDAC1-203ENST00000463172 TRPC6Q9Y210 931 aa14.88□□□□□ -0.03
HDAC1-203ENST00000463172 IPO5O00410 1097 aaKnown RBP14.87□□□□□ -0.03
HDAC1-203ENST00000463172 BACH1O14867 736 aa14.87□□□□□ -0.03
HDAC1-203ENST00000463172 MARK3P27448 753 aa14.87□□□□□ -0.03
HDAC1-203ENST00000463172 PBX2P40425 430 aa14.87□□□□□ -0.03
HDAC1-203ENST00000463172 USP11P51784 963 aa14.87□□□□□ -0.03
HDAC1-203ENST00000463172 KRT76Q01546 638 aa14.87□□□□□ -0.03
HDAC1-203ENST00000463172 GRIK4Q16099 956 aa14.87□□□□□ -0.03
HDAC1-203ENST00000463172 PPP2R2DQ66LE6 453 aa14.87□□□□□ -0.03
HDAC1-203ENST00000463172 SLC17A8Q8NDX2 589 aa14.87□□□□□ -0.03
HDAC1-203ENST00000463172 SEPT8Q92599 483 aa14.87□□□□□ -0.03
HDAC1-203ENST00000463172 ZBED2Q9BTP6 218 aa14.87□□□□□ -0.03
HDAC1-203ENST00000463172 TUBE1Q9UJT0 475 aa14.87□□□□□ -0.03
HDAC1-203ENST00000463172 FAM86B1E9PN63 330 aa14.86□□□□□ -0.03
HDAC1-203ENST00000463172 M0QZ92 97 aa14.86□□□□□ -0.03
HDAC1-203ENST00000463172 PFKFB2O60825 505 aa14.86□□□□□ -0.03
HDAC1-203ENST00000463172 NBNO60934 754 aa14.86□□□□□ -0.03
HDAC1-203ENST00000463172 PPFIA3O75145 1194 aa14.86□□□□□ -0.03
HDAC1-203ENST00000463172 FAM86B2P0C5J1 330 aa14.86□□□□□ -0.03
HDAC1-203ENST00000463172 CIITAP33076 1130 aa14.86□□□□□ -0.03
HDAC1-203ENST00000463172 ITGB3BPQ13352 177 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms