RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 GGPS1O95749 300 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 ELNP15502 786 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 RPA1P27694 616 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 UBA7P41226 1012 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 FAM160A1Q05DH4 1040 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 CACNB2Q08289 660 aaPredicted RBP16.13■□□□□ 0.17
COL6A1-202ENST00000463060 GRB10Q13322 594 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 E2F4Q16254 413 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 ECM1Q16610 540 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 NCAPH2Q6IBW4 605 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 CABP7Q86V35 215 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 LRRC15Q8TF66 581 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 PNMA5Q96PV4 448 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 EIF2AK1Q9BQI3 630 aaKnown RBP16.13■□□□□ 0.17
COL6A1-202ENST00000463060 JPH1Q9HDC5 661 aaPredicted RBP16.13■□□□□ 0.17
COL6A1-202ENST00000463060 DISC1Q9NRI5 854 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 FAM13BQ9NYF5 915 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 ZHX1Q9UKY1 873 aaPredicted RBP16.13■□□□□ 0.17
COL6A1-202ENST00000463060 GNEQ9Y223 722 aaKnown RBP16.13■□□□□ 0.17
COL6A1-202ENST00000463060 STK24Q9Y6E0 443 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 IGKV6D-21A0A0A0MT36 114 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 DDX39AO00148 427 aaKnown RBP16.12■□□□□ 0.17
COL6A1-202ENST00000463060 NKRFO15226 690 aaKnown RBP eCLIP16.12■□□□□ 0.17
COL6A1-202ENST00000463060 MED24O75448 989 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 MBD3O95983 291 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 PTGS1P23219 599 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 SFNP31947 248 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 JAK3P52333 1124 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 ACTR2P61160 394 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 TMEM119Q4V9L6 283 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 NAALADL2Q58DX5 795 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 GJC2Q5T442 439 aaPredicted RBP16.12■□□□□ 0.17
COL6A1-202ENST00000463060 KRT79Q5XKE5 535 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 MIER3Q7Z3K6 550 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 CATSPER3Q86XQ3 398 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 DHX37Q8IY37 1157 aaKnown RBP16.12■□□□□ 0.17
COL6A1-202ENST00000463060 SMAP1Q8IYB5 467 aaPredicted RBP16.12■□□□□ 0.17
COL6A1-202ENST00000463060 RAET1EQ8TD07 263 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 TUFT1Q9NNX1 390 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 PTPN22Q9Y2R2 807 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 Q9Y3F1 56 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 TRIM17Q9Y577 477 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 PCDHA10Q9Y5I2 948 aa16.12■□□□□ 0.17
COL6A1-202ENST00000463060 WDR64B1ANS9 1081 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 ZNF202O95125 648 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 GH1P01241 217 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 HMGCRP04035 888 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 MUTP22033 750 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 NKX3-2P78367 333 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 TNFAIP2Q03169 654 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 LAMC2Q13753 1193 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 KARSQ15046 597 aaKnown RBP16.11■□□□□ 0.17
COL6A1-202ENST00000463060 KLHL40Q2TBA0 621 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 HSDL1Q3SXM5 330 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 TPRNQ4KMQ1 711 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 CCDC73Q6ZRK6 1079 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 KCTD17Q8N5Z5 321 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 SLAIN1Q8ND83 568 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 SNX29Q8TEQ0 813 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 DYDC2Q96IM9 177 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 GPR20Q99678 358 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 PANK2Q9BZ23 570 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 DACT1Q9NYF0 836 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 RGL1Q9NZL6 768 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 FAM184BQ9ULE4 1060 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 PTCH2Q9Y6C5 1203 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 HTTP42858 3142 aa16.11■□□□□ 0.17
COL6A1-202ENST00000463060 POLR2DO15514 142 aaKnown RBP16.1■□□□□ 0.17
COL6A1-202ENST00000463060 CHMP2AO43633 222 aa16.1■□□□□ 0.17
COL6A1-202ENST00000463060 ACTN4O43707 911 aaKnown RBP16.1■□□□□ 0.17
COL6A1-202ENST00000463060 TRAK2O60296 914 aa16.1■□□□□ 0.17
COL6A1-202ENST00000463060 LYPLA2O95372 231 aa16.1■□□□□ 0.17
COL6A1-202ENST00000463060 P4HBP07237 508 aaKnown RBP16.1■□□□□ 0.17
COL6A1-202ENST00000463060 SUPT20HL2P0C7V6 817 aa16.1■□□□□ 0.17
COL6A1-202ENST00000463060 HOXD8P13378 290 aaPredicted RBP16.1■□□□□ 0.17
COL6A1-202ENST00000463060 GRK4P32298 578 aa16.1■□□□□ 0.17
COL6A1-202ENST00000463060 CCT6AP40227 531 aaKnown RBP16.1■□□□□ 0.17
COL6A1-202ENST00000463060 SYKP43405 635 aa16.1■□□□□ 0.17
COL6A1-202ENST00000463060 SKOR2Q2VWA4 1001 aaPredicted RBP16.1■□□□□ 0.17
COL6A1-202ENST00000463060 LONRF3Q496Y0 759 aa16.1■□□□□ 0.17
COL6A1-202ENST00000463060 HAUS3Q68CZ6 603 aa16.1■□□□□ 0.17
COL6A1-202ENST00000463060 ERMNQ8TAM6 284 aa16.1■□□□□ 0.17
COL6A1-202ENST00000463060 NEK9Q8TD19 979 aa16.1■□□□□ 0.17
COL6A1-202ENST00000463060 SEPT1Q8WYJ6 367 aa16.1■□□□□ 0.17
COL6A1-202ENST00000463060 TIGD1Q96MW7 591 aa16.1■□□□□ 0.17
COL6A1-202ENST00000463060 PCYT2Q99447 389 aa16.1■□□□□ 0.17
COL6A1-202ENST00000463060 MLXIPQ9HAP2 919 aa16.1■□□□□ 0.17
COL6A1-202ENST00000463060 WRAP73Q9P2S5 460 aaPredicted RBP16.1■□□□□ 0.17
COL6A1-202ENST00000463060 WDR81Q562E7 1941 aa16.09■□□□□ 0.17
COL6A1-202ENST00000463060 SEPT4O43236 478 aa16.09■□□□□ 0.17
COL6A1-202ENST00000463060 SORBS3O60504 671 aa16.09■□□□□ 0.17
COL6A1-202ENST00000463060 LGR5O75473 907 aa16.09■□□□□ 0.17
COL6A1-202ENST00000463060 STBD1O95210 358 aa16.09■□□□□ 0.17
COL6A1-202ENST00000463060 PSAPP07602 524 aa16.09■□□□□ 0.17
COL6A1-202ENST00000463060 PRKAR2AP13861 404 aaKnown RBP16.09■□□□□ 0.17
COL6A1-202ENST00000463060 AKR1A1P14550 325 aa16.09■□□□□ 0.17
COL6A1-202ENST00000463060 PLCG1P19174 1290 aa16.09■□□□□ 0.17
COL6A1-202ENST00000463060 TXLNAP40222 546 aa16.09■□□□□ 0.17
COL6A1-202ENST00000463060 CTCFP49711 727 aaPredicted RBP16.09■□□□□ 0.17
COL6A1-202ENST00000463060 PDXDC2PQ6P474 469 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms