RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 USP11P51784 963 aa21.42■■□□□ 1.02
COL9A3-203ENST00000462700 BFSP2Q13515 415 aa21.42■■□□□ 1.02
COL9A3-203ENST00000462700 HIC1Q14526 733 aa21.42■■□□□ 1.02
COL9A3-203ENST00000462700 C16orf59Q7L2K0 433 aa21.42■■□□□ 1.02
COL9A3-203ENST00000462700 TBCKQ8TEA7 893 aa21.42■■□□□ 1.02
COL9A3-203ENST00000462700 SCLYQ96I15 445 aa21.42■■□□□ 1.02
COL9A3-203ENST00000462700 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.42■■□□□ 1.021e-16■□□□□ 9.6
COL9A3-203ENST00000462700 IL23AQ9NPF7 189 aa21.42■■□□□ 1.02
COL9A3-203ENST00000462700 EMSYQ7Z589 1322 aa21.41■■□□□ 1.02
COL9A3-203ENST00000462700 C17orf102A2RUQ5 167 aa21.41■■□□□ 1.02
COL9A3-203ENST00000462700 JAK2O60674 1132 aa21.41■■□□□ 1.02
COL9A3-203ENST00000462700 ACRP10323 421 aa21.41■■□□□ 1.02
COL9A3-203ENST00000462700 ZNF200P98182 395 aaPredicted RBP21.41■■□□□ 1.02
COL9A3-203ENST00000462700 RABEP1Q15276 862 aa21.41■■□□□ 1.02
COL9A3-203ENST00000462700 PRR16Q569H4 304 aa21.41■■□□□ 1.02
COL9A3-203ENST00000462700 CCDC155Q8N6L0 562 aa21.41■■□□□ 1.02
COL9A3-203ENST00000462700 CAGE1Q8TC20 777 aa21.41■■□□□ 1.02
COL9A3-203ENST00000462700 DHX38Q92620 1227 aaKnown RBP21.41■■□□□ 1.02
COL9A3-203ENST00000462700 LENG9Q96B70 501 aa21.41■■□□□ 1.02
COL9A3-203ENST00000462700 LRCH3Q96II8 777 aa21.41■■□□□ 1.02
COL9A3-203ENST00000462700 ZNF577Q9BSK1 485 aa21.41■■□□□ 1.02
COL9A3-203ENST00000462700 IPO5O00410 1097 aaKnown RBP21.4■■□□□ 1.02
COL9A3-203ENST00000462700 DHX15O43143 795 aaKnown RBP21.4■■□□□ 1.02
COL9A3-203ENST00000462700 ACTR2P61160 394 aa21.4■■□□□ 1.02
COL9A3-203ENST00000462700 RBL2Q08999 1139 aa21.4■■□□□ 1.02
COL9A3-203ENST00000462700 PTK7Q13308 1070 aa21.4■■□□□ 1.02
COL9A3-203ENST00000462700 TMEM240Q5SV17 173 aa21.4■■□□□ 1.02
COL9A3-203ENST00000462700 PSRC1Q6PGN9 363 aaPredicted RBP21.4■■□□□ 1.02
COL9A3-203ENST00000462700 KRT25Q7Z3Z0 450 aa21.4■■□□□ 1.02
COL9A3-203ENST00000462700 RETREG2Q8NC44 543 aa21.4■■□□□ 1.02
COL9A3-203ENST00000462700 RNPC3Q96LT9 517 aaKnown RBP21.4■■□□□ 1.02
COL9A3-203ENST00000462700 ZSCAN31Q96LW9 406 aaPredicted RBP21.4■■□□□ 1.02
COL9A3-203ENST00000462700 RNPEPQ9H4A4 650 aa21.4■■□□□ 1.02
COL9A3-203ENST00000462700 ERAP1Q9NZ08 941 aa21.4■■□□□ 1.02
COL9A3-203ENST00000462700 DDX39AO00148 427 aaKnown RBP21.39■■□□□ 1.01
COL9A3-203ENST00000462700 LGR5O75473 907 aa21.39■■□□□ 1.01
COL9A3-203ENST00000462700 CCNE2O96020 404 aa21.39■■□□□ 1.01
COL9A3-203ENST00000462700 IQCF3P0C7M6 154 aa21.39■■□□□ 1.01
COL9A3-203ENST00000462700 NONOQ15233 471 aaKnown RBP eCLIP21.39■■□□□ 1.01
COL9A3-203ENST00000462700 CCDC83Q8IWF9 413 aa21.39■■□□□ 1.01
COL9A3-203ENST00000462700 AFAP1L1Q8TED9 768 aa21.39■■□□□ 1.01
COL9A3-203ENST00000462700 GLG1Q92896 1179 aa21.39■■□□□ 1.01
COL9A3-203ENST00000462700 UIMC1Q96RL1 719 aa21.39■■□□□ 1.01
COL9A3-203ENST00000462700 PCYT2Q99447 389 aa21.39■■□□□ 1.01
COL9A3-203ENST00000462700 SMARCAD1Q9H4L7 1026 aa21.39■■□□□ 1.01
COL9A3-203ENST00000462700 GTF3C3Q9Y5Q9 886 aa21.39■■□□□ 1.01
COL9A3-203ENST00000462700 ATG7O95352 703 aa21.38■■□□□ 1.01
COL9A3-203ENST00000462700 MARK3P27448 753 aa21.38■■□□□ 1.01
COL9A3-203ENST00000462700 ZNF365Q70YC5 407 aa21.38■■□□□ 1.01
COL9A3-203ENST00000462700 SERINC5Q86VE9 423 aa21.38■■□□□ 1.01
COL9A3-203ENST00000462700 RPUSD2Q8IZ73 545 aaKnown RBP21.38■■□□□ 1.01
COL9A3-203ENST00000462700 OXER1Q8TDS5 423 aa21.38■■□□□ 1.01
COL9A3-203ENST00000462700 ATP6V0A1Q93050 837 aa21.38■■□□□ 1.01
COL9A3-203ENST00000462700 WNT8BQ93098 351 aa21.38■■□□□ 1.01
COL9A3-203ENST00000462700 VWCEQ96DN2 955 aa21.38■■□□□ 1.01
COL9A3-203ENST00000462700 TBC1D32Q96NH3 1257 aa21.38■■□□□ 1.01
COL9A3-203ENST00000462700 SH2B1Q9NRF2 756 aaPredicted RBP21.38■■□□□ 1.01
COL9A3-203ENST00000462700 TBC1D22BQ9NU19 505 aa21.38■■□□□ 1.01
COL9A3-203ENST00000462700 SETD4Q9NVD3 440 aa21.38■■□□□ 1.01
COL9A3-203ENST00000462700 CCDC194A0A1B0GVG4 234 aa21.37■■□□□ 1.01
COL9A3-203ENST00000462700 GNAT1P11488 350 aa21.37■■□□□ 1.01
COL9A3-203ENST00000462700 CKBP12277 381 aa21.37■■□□□ 1.01
COL9A3-203ENST00000462700 RFC2P35250 354 aa21.37■■□□□ 1.01
COL9A3-203ENST00000462700 INF2Q27J81 1249 aa21.37■■□□□ 1.01
COL9A3-203ENST00000462700 TRIM71Q2Q1W2 868 aaKnown RBP21.37■■□□□ 1.01
COL9A3-203ENST00000462700 AZI2Q9H6S1 392 aa21.37■■□□□ 1.01
COL9A3-203ENST00000462700 NRCAMQ92823 1304 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 CYP3A7-CYP3A51PA0A087WV96 503 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 MSH4O15457 936 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 TREHO43280 583 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 TDP2O95551 362 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 FGBP02675 491 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 PFKMP08237 780 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 SELPP16109 830 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 CYP3A7P24462 503 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 ADAM17P78536 824 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 Q4G0T1 1027 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 RASIP1Q5U651 963 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 MOXD1Q6UVY6 613 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 ABHD15Q6UXT9 468 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 LRRC8DQ7L1W4 858 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 LMBR1Q8WVP7 490 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 LLPHQ9BRT6 129 aaKnown RBP21.36■■□□□ 1.01
COL9A3-203ENST00000462700 TANC1Q9C0D5 1861 aa21.36■■□□□ 1.01
COL9A3-203ENST00000462700 IGKV6D-21A0A0A0MT36 114 aa21.35■■□□□ 1.01
COL9A3-203ENST00000462700 ST18O60284 1047 aa21.35■■□□□ 1.01
COL9A3-203ENST00000462700 SLC34A2O95436 690 aa21.35■■□□□ 1.01
COL9A3-203ENST00000462700 KRT2P35908 639 aa21.35■■□□□ 1.01
COL9A3-203ENST00000462700 STAT5BP51692 787 aa21.35■■□□□ 1.01
COL9A3-203ENST00000462700 ZNF746Q6NUN9 644 aaPredicted RBP21.35■■□□□ 1.01
COL9A3-203ENST00000462700 PLPPR4Q7Z2D5 763 aa21.35■■□□□ 1.01
COL9A3-203ENST00000462700 DEFB128Q7Z7B8 93 aa21.35■■□□□ 1.01
COL9A3-203ENST00000462700 IL27Q8NEV9 243 aa21.35■■□□□ 1.01
COL9A3-203ENST00000462700 HERVK_113Q902F9 699 aa21.35■■□□□ 1.01
COL9A3-203ENST00000462700 MBOAT7Q96N66 472 aa21.35■■□□□ 1.01
COL9A3-203ENST00000462700 BRMS1Q9HCU9 246 aa21.35■■□□□ 1.01
COL9A3-203ENST00000462700 TCEAL9Q9UHQ7 104 aa21.35■■□□□ 1.01
COL9A3-203ENST00000462700 MMP1P03956 469 aa21.34■■□□□ 1.01
COL9A3-203ENST00000462700 FOSBP53539 338 aa21.34■■□□□ 1.01
COL9A3-203ENST00000462700 KRT76Q01546 638 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms