RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 EMSYQ7Z589 1322 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 FAM86C2PA6NEL3 165 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 KLRF2D3W0D1 207 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 PRC1O43663 620 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 CYTH3O43739 400 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 PPFIA4O75335 1185 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 LGALS2P05162 132 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 MRPS9P82933 396 aaKnown RBP9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 IKBKEQ14164 716 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 ADCK5Q3MIX3 580 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 LEXMQ3ZCV2 418 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 CASC1Q6TDU7 716 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 DBF4BQ8NFT6 615 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 SPATA33Q96N06 139 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 PIGSQ96S52 555 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 MTA3Q9BTC8 594 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 TMEM121BQ9BXQ6 578 aaPredicted RBP9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 LRRC2Q9BYS8 371 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 MAP3K20Q9NYL2 800 aaKnown RBP9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 PCDHA1Q9Y5I3 950 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 VPS13AQ96RL7 3174 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 MYO15AQ9UKN7 3530 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 EVPLQ92817 2033 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 ZDBF2Q9HCK1 2354 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 FNDC1Q4ZHG4 1894 aaPredicted RBP9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 RSPH10B2B2RC85 870 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 TREHO43280 583 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 GPR37L1O60883 481 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 RSPH10BP0C881 870 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 SMIM10L2AP0DMW4 78 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 SMIM10L2BP0DMW5 78 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 IL9P15248 144 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 CCND2P30279 289 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 MCM5P33992 734 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 HSPA4P34932 840 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 THPOP40225 353 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 COL19A1Q14993 1142 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 KCNV1Q6PIU1 500 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 TRIM50Q86XT4 487 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 HOMER1Q86YM7 354 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 MYOCDQ8IZQ8 938 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 SAMD3Q8N6K7 520 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 FBXO22Q8NEZ5 403 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 TMEM87BQ96K49 555 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 RIOX1Q9H6W3 641 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 INSL6Q9Y581 213 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 WDR87Q6ZQQ6 2873 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 DMDP11532 3685 aa9.15□□□□□ -0.94
CDC42BPA-210ENST00000462553 C17orf102A2RUQ5 167 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 PI4K2BG5E9Z4 385 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 H3BRB1 525 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 AMHP03971 560 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 CTSHP09668 335 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 LINC00271P0C7V0 271 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 TGFB3P10600 412 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 KCNA5P22460 613 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 ICAM3P32942 547 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 LIFRP42702 1097 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 ADAM17P78536 824 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 EXOSC10Q01780 885 aaKnown RBP9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 SART3Q15020 963 aaKnown RBP9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 EPC2Q52LR7 807 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 TMEM31Q5JXX7 168 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 SGMS1Q86VZ5 419 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 FCHSD1Q86WN1 690 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 FAM178BQ8IXR5 827 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 ZNF654Q8IZM8 581 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 NEK9Q8TD19 979 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 ATP6V0A1Q93050 837 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 MRPL38Q96DV4 380 aaKnown RBP9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 TCEANC2Q96MN5 208 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 INPP4AQ96PE3 977 aaPredicted RBP9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 MAP3K14Q99558 947 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 GPR20Q99678 358 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 MYL10Q9BUA6 226 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 RNPEPQ9H4A4 650 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 TUT1Q9H6E5 874 aaKnown RBP9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 RC3H2Q9HBD1 1191 aaKnown RBP9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 ARIH1Q9Y4X5 557 aaPredicted RBP9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 SNX14Q9Y5W7 946 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 CACNA1HO95180 2353 aa9.14□□□□□ -0.95
CDC42BPA-210ENST00000462553 MYH9P35579 1960 aaKnown RBP9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 ERICH2A1L162 156 aa9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 H3BNC9 293 aa9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 GCOM1H8Y6P7 765 aaPredicted RBP9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 CAND2O75155 1236 aa9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 DDAH1O94760 285 aa9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 POLR2MP0CAP2 368 aa9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 CPA1P15085 419 aa9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 RNF20Q5VTR2 975 aa9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 METTL7BQ6UX53 244 aa9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 CATIPQ7Z7H3 387 aa9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 RAB11FIP4Q86YS3 637 aa9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 LMBR1Q8WVP7 490 aa9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 TOP1MTQ969P6 601 aa9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 NEK1Q96PY6 1258 aa9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 MLXIPQ9HAP2 919 aa9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 HCN4Q9Y3Q4 1203 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms