RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 CYP3A7P24462 503 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 ACTR2P61160 394 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 HIC1Q14526 733 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 INF2Q27J81 1249 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 KRT40Q6A162 431 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 MFSD5Q6N075 450 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 TMX3Q96JJ7 454 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 MBOAT7Q96N66 472 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 UIMC1Q96RL1 719 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 PCYT2Q99447 389 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 ZNF577Q9BSK1 485 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 HIPK3Q9H422 1215 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 CCDC194A0A1B0GVG4 234 aa17.99■□□□□ 0.47
ERCC3-206ENST00000462306 MSH4O15457 936 aa17.99■□□□□ 0.47
ERCC3-206ENST00000462306 LGR5O75473 907 aa17.99■□□□□ 0.47
ERCC3-206ENST00000462306 ATG7O95352 703 aa17.99■□□□□ 0.47
ERCC3-206ENST00000462306 TDP2O95551 362 aa17.99■□□□□ 0.47
ERCC3-206ENST00000462306 HOXC8P31273 242 aa17.99■□□□□ 0.47
ERCC3-206ENST00000462306 CYP2C18P33260 490 aa17.99■□□□□ 0.47
ERCC3-206ENST00000462306 KRT2P35908 639 aa17.99■□□□□ 0.47
ERCC3-206ENST00000462306 FOSBP53539 338 aa17.99■□□□□ 0.47
ERCC3-206ENST00000462306 HMGN5P82970 282 aaKnown RBP17.99■□□□□ 0.47
ERCC3-206ENST00000462306 NR5A1Q13285 461 aa17.99■□□□□ 0.47
ERCC3-206ENST00000462306 PTGISQ16647 500 aa17.99■□□□□ 0.47
ERCC3-206ENST00000462306 Q4G0T1 1027 aa17.99■□□□□ 0.47
ERCC3-206ENST00000462306 EARS2Q5JPH6 523 aaKnown RBP17.99■□□□□ 0.47
ERCC3-206ENST00000462306 MOXD1Q6UVY6 613 aa17.99■□□□□ 0.47
ERCC3-206ENST00000462306 TBC1D22BQ9NU19 505 aa17.99■□□□□ 0.47
ERCC3-206ENST00000462306 EMSYQ7Z589 1322 aa17.98■□□□□ 0.47
ERCC3-206ENST00000462306 FAM205CA6NFA0 338 aa17.98■□□□□ 0.47
ERCC3-206ENST00000462306 DDX39AO00148 427 aaKnown RBP17.98■□□□□ 0.47
ERCC3-206ENST00000462306 SMIM10L2AP0DMW4 78 aa17.98■□□□□ 0.47
ERCC3-206ENST00000462306 SMIM10L2BP0DMW5 78 aa17.98■□□□□ 0.47
ERCC3-206ENST00000462306 MCM2P49736 904 aa17.98■□□□□ 0.47
ERCC3-206ENST00000462306 EPHB4P54760 987 aa17.98■□□□□ 0.47
ERCC3-206ENST00000462306 ZNF200P98182 395 aaPredicted RBP17.98■□□□□ 0.47
ERCC3-206ENST00000462306 FPGSQ05932 587 aa17.98■□□□□ 0.47
ERCC3-206ENST00000462306 PIK3AP1Q6ZUJ8 805 aa17.98■□□□□ 0.47
ERCC3-206ENST00000462306 WNT8AQ9H1J5 351 aa17.98■□□□□ 0.47
ERCC3-206ENST00000462306 RNPEPQ9H4A4 650 aa17.98■□□□□ 0.47
ERCC3-206ENST00000462306 ZNF215Q9UL58 517 aaPredicted RBP17.98■□□□□ 0.47
ERCC3-206ENST00000462306 IGKV6D-21A0A0A0MT36 114 aa17.97■□□□□ 0.47
ERCC3-206ENST00000462306 BTBD18B2RXH4 712 aa17.97■□□□□ 0.47
ERCC3-206ENST00000462306 CSF2RAP15509 400 aa17.97■□□□□ 0.47
ERCC3-206ENST00000462306 TRIM29Q14134 588 aa17.97■□□□□ 0.47
ERCC3-206ENST00000462306 ABHD15Q6UXT9 468 aa17.97■□□□□ 0.47
ERCC3-206ENST00000462306 NEK8Q86SG6 692 aa17.97■□□□□ 0.47
ERCC3-206ENST00000462306 DIS3L2Q8IYB7 885 aaKnown RBP17.97■□□□□ 0.47
ERCC3-206ENST00000462306 TDHQ8IZJ6 230 aa17.97■□□□□ 0.47
ERCC3-206ENST00000462306 DHX38Q92620 1227 aaKnown RBP17.97■□□□□ 0.47
ERCC3-206ENST00000462306 SLC5A5Q92911 643 aa17.97■□□□□ 0.47
ERCC3-206ENST00000462306 SMARCAD1Q9H4L7 1026 aa17.97■□□□□ 0.47
ERCC3-206ENST00000462306 BRMS1Q9HCU9 246 aa17.97■□□□□ 0.47
ERCC3-206ENST00000462306 NOD1Q9Y239 953 aa17.97■□□□□ 0.47
ERCC3-206ENST00000462306 CCL23P55773 120 aa17.96■□□□□ 0.47
ERCC3-206ENST00000462306 GUCY1B3Q02153 619 aa17.96■□□□□ 0.47
ERCC3-206ENST00000462306 LETM2Q2VYF4 491 aa17.96■□□□□ 0.47
ERCC3-206ENST00000462306 PPP4R3AQ6IN85 833 aa17.96■□□□□ 0.47
ERCC3-206ENST00000462306 TMEM199Q8N511 208 aa17.96■□□□□ 0.47
ERCC3-206ENST00000462306 GLG1Q92896 1179 aa17.96■□□□□ 0.47
ERCC3-206ENST00000462306 C8orf76Q96K31 380 aa17.96■□□□□ 0.47
ERCC3-206ENST00000462306 RIT2Q99578 217 aa17.96■□□□□ 0.47
ERCC3-206ENST00000462306 ERAP1Q9NZ08 941 aa17.96■□□□□ 0.47
ERCC3-206ENST00000462306 C17orf102A2RUQ5 167 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 PITPNM1O00562 1244 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 SLC37A4O43826 429 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 MARK3P27448 753 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 ADAM17P78536 824 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 RBL2Q08999 1139 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 PTK7Q13308 1070 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 SHHQ15465 462 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 C9orf50Q5SZB4 431 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 ZNF746Q6NUN9 644 aaPredicted RBP17.95■□□□□ 0.46
ERCC3-206ENST00000462306 C16orf59Q7L2K0 433 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 PLPPR4Q7Z2D5 763 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 FBXO18Q8NFZ0 1043 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 ETNPPLQ8TBG4 499 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 WNT8BQ93098 351 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 GJA10Q969M2 543 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 VWCEQ96DN2 955 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 AZI2Q9H6S1 392 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 SETD4Q9NVD3 440 aa17.95■□□□□ 0.46
ERCC3-206ENST00000462306 DDX25Q9UHL0 483 aaKnown RBP17.95■□□□□ 0.46
ERCC3-206ENST00000462306 PSMD10O75832 226 aa17.94■□□□□ 0.46
ERCC3-206ENST00000462306 GCFC2P16383 781 aaKnown RBP17.94■□□□□ 0.46
ERCC3-206ENST00000462306 STAT5BP51692 787 aa17.94■□□□□ 0.46
ERCC3-206ENST00000462306 KRT76Q01546 638 aa17.94■□□□□ 0.46
ERCC3-206ENST00000462306 PPIGQ13427 754 aaKnown RBP eCLIP17.94■□□□□ 0.462e-7■■□□□ 11.7
ERCC3-206ENST00000462306 BFSP2Q13515 415 aa17.94■□□□□ 0.46
ERCC3-206ENST00000462306 TRIM71Q2Q1W2 868 aaKnown RBP17.94■□□□□ 0.46
ERCC3-206ENST00000462306 SERINC5Q86VE9 423 aa17.94■□□□□ 0.46
ERCC3-206ENST00000462306 CCDC60Q8IWA6 550 aaPredicted RBP17.94■□□□□ 0.46
ERCC3-206ENST00000462306 FAM184AQ8NB25 1140 aa17.94■□□□□ 0.46
ERCC3-206ENST00000462306 CAGE1Q8TC20 777 aa17.94■□□□□ 0.46
ERCC3-206ENST00000462306 ATP6V0A1Q93050 837 aa17.94■□□□□ 0.46
ERCC3-206ENST00000462306 SCLYQ96I15 445 aa17.94■□□□□ 0.46
ERCC3-206ENST00000462306 TREHO43280 583 aa17.93■□□□□ 0.46
ERCC3-206ENST00000462306 PLCB4Q15147 1175 aa17.93■□□□□ 0.46
ERCC3-206ENST00000462306 LRCH2Q5VUJ6 765 aa17.93■□□□□ 0.46
ERCC3-206ENST00000462306 MIS18BP1Q6P0N0 1132 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms