RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 RNF208Q9H0X6 261 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 C7orf69Q9H7B7 122 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 ZNF408Q9H9D4 720 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.83□□□□□ -1.32
VPS36-202ENST00000462289 ZBTB21Q9ULJ3 1066 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 SLC45A1Q9Y2W3 748 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 PLXNB2O15031 1838 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 COL11A1P12107 1806 aaPredicted RBP6.83□□□□□ -1.32
VPS36-202ENST00000462289 CYP2D7A0A087X1C5 515 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 MEGF11A6BM72 1044 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 IGF2BP3O00425 579 aaKnown RBP eCLIP6.82□□□□□ -1.32
VPS36-202ENST00000462289 COBLO75128 1261 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 MED26O95402 600 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 MFAP1P55081 439 aaKnown RBP6.82□□□□□ -1.32
VPS36-202ENST00000462289 KIF23Q02241 960 aaPredicted RBP6.82□□□□□ -1.32
VPS36-202ENST00000462289 PPARAQ07869 468 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 C8orf34Q49A92 452 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 RNF43Q68DV7 783 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 CWC27Q6UX04 472 aaKnown RBP6.82□□□□□ -1.32
VPS36-202ENST00000462289 ZSCAN29Q8IWY8 852 aaPredicted RBP6.82□□□□□ -1.32
VPS36-202ENST00000462289 TRIM42Q8IWZ5 723 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 SLC44A5Q8NCS7 719 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 STAG1Q8WVM7 1258 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 BRI3BPQ8WY22 251 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 MKL1Q969V6 931 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 RILPL2Q969X0 211 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 HHIPQ96QV1 700 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 FAM83CQ9BQN1 747 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 NACAP1Q9BZK3 213 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 KIAA1683Q9H0B3 1180 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 DIAPH3Q9NSV4 1193 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 TCP11L1Q9NUJ3 509 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 SAP30BPQ9UHR5 308 aaKnown RBP6.82□□□□□ -1.32
VPS36-202ENST00000462289 HIF3AQ9Y2N7 669 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 CSADQ9Y600 493 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 SMCHD1A6NHR9 2005 aa6.82□□□□□ -1.32
VPS36-202ENST00000462289 CENPFP49454 3210 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 ZNF236Q9UL36 1845 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 CA12O43570 354 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 AOC2O75106 756 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 TNFRSF21O75509 655 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 HOXA7P31268 230 aaPredicted RBP6.81□□□□□ -1.32
VPS36-202ENST00000462289 PREPP48147 710 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 GTF2A2P52657 109 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 BACE1P56817 501 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 MAP2K1Q02750 393 aaPredicted RBP6.81□□□□□ -1.32
VPS36-202ENST00000462289 PTH1RQ03431 593 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 EHHADHQ08426 723 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 PRKG1Q13976 671 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 NECTIN1Q15223 517 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 LBX2Q6XYB7 198 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 TMEM179Q6ZVK1 233 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 ANKRD23Q86SG2 305 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 CLEC10AQ8IUN9 316 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 TBC1D10CQ8IV04 446 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 FAM20CQ8IXL6 584 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 RUFY2Q8WXA3 655 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 ANKS1AQ92625 1134 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 NXPE3Q969Y0 559 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 DYNLL2Q96FJ2 89 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 POLIQ9UNA4 740 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 TMX2Q9Y320 296 aa6.81□□□□□ -1.32
VPS36-202ENST00000462289 ZSWIM8A7E2V4 1837 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 BRCA2P51587 3418 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 A0A1W2PRG0 241 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 HMX2A2RU54 273 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 PRR19A6NJB7 356 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 C19orf81C9J6K1 198 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 EREGO14944 169 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 CDC45O75419 566 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 TRPA1O75762 1119 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 GH2P01242 217 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 POLR3DP05423 398 aaPredicted RBP6.8□□□□□ -1.32
VPS36-202ENST00000462289 CYP21A2P08686 494 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 CETPP11597 493 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 AKR1B1P15121 316 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 C19orf57Q0VDD7 668 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 SREBF2Q12772 1141 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 SNAPC2Q13487 334 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 MTMR3Q13615 1198 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 CERKLQ49MI3 558 aaPredicted RBP6.8□□□□□ -1.32
VPS36-202ENST00000462289 MCTP1Q6DN14 999 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 RCSD1Q6JBY9 416 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 VN1R5Q7Z5H4 357 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 CCDC82Q8N4S0 544 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 TTC16Q8NEE8 873 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 SNX29Q8TEQ0 813 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 BSNDQ8WZ55 320 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 OSMRQ99650 979 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 ZKSCAN3Q9BRR0 538 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 MTA3Q9BTC8 594 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 NAPBQ9H115 298 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 SOX17Q9H6I2 414 aaPredicted RBP6.8□□□□□ -1.32
VPS36-202ENST00000462289 IL17RBQ9NRM6 502 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 NYAP2Q9P242 653 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.8□□□□□ -1.32
VPS36-202ENST00000462289 ZHX2Q9Y6X8 837 aa6.8□□□□□ -1.32
VPS36-202ENST00000462289 ZNFX1Q9P2E3 1918 aaKnown RBP6.8□□□□□ -1.32
VPS36-202ENST00000462289 BTBD19C9JJ37 291 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms