RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 TRIM50Q86XT4 487 aa20.51■□□□□ 0.87
SSB-206ENST00000461708 CMTR1Q8N1G2 835 aaKnown RBP20.51■□□□□ 0.87
SSB-206ENST00000461708 SP7Q8TDD2 431 aaPredicted RBP20.51■□□□□ 0.87
SSB-206ENST00000461708 LMBR1Q8WVP7 490 aa20.51■□□□□ 0.87
SSB-206ENST00000461708 SUGCTQ9HAC7 445 aa20.51■□□□□ 0.87
SSB-206ENST00000461708 UBIAD1Q9Y5Z9 338 aa20.51■□□□□ 0.87
SSB-206ENST00000461708 ATP9AO75110 1047 aa20.5■□□□□ 0.87
SSB-206ENST00000461708 RXRAP19793 462 aa20.5■□□□□ 0.87
SSB-206ENST00000461708 TCF7P36402 384 aaPredicted RBP20.5■□□□□ 0.87
SSB-206ENST00000461708 TFF2Q03403 129 aa20.5■□□□□ 0.87
SSB-206ENST00000461708 UTP14CQ5TAP6 766 aaKnown RBP20.5■□□□□ 0.87
SSB-206ENST00000461708 KRT40Q6A162 431 aa20.5■□□□□ 0.87
SSB-206ENST00000461708 TAF2Q6P1X5 1199 aa20.5■□□□□ 0.87
SSB-206ENST00000461708 SYNE3Q6ZMZ3 975 aa20.5■□□□□ 0.87
SSB-206ENST00000461708 SEPT1Q8WYJ6 367 aa20.5■□□□□ 0.87
SSB-206ENST00000461708 APBB2Q92870 758 aa20.5■□□□□ 0.87
SSB-206ENST00000461708 HLA-CQ95604 372 aa20.5■□□□□ 0.87
SSB-206ENST00000461708 EHMT1Q9H9B1 1298 aa20.5■□□□□ 0.87
SSB-206ENST00000461708 RBM28Q9NW13 759 aaKnown RBP20.5■□□□□ 0.87
SSB-206ENST00000461708 COL4A6Q14031 1691 aa20.5■□□□□ 0.87
SSB-206ENST00000461708 TCF20Q9UGU0 1960 aaKnown RBP20.5■□□□□ 0.87
SSB-206ENST00000461708 ARHGAP4P98171 946 aa20.49■□□□□ 0.87
SSB-206ENST00000461708 EXOSC10Q01780 885 aaKnown RBP20.49■□□□□ 0.87
SSB-206ENST00000461708 MTMR1Q13613 665 aa20.49■□□□□ 0.87
SSB-206ENST00000461708 MICU3Q86XE3 530 aa20.49■□□□□ 0.87
SSB-206ENST00000461708 TOP1MTQ969P6 601 aa20.49■□□□□ 0.87
SSB-206ENST00000461708 NEK1Q96PY6 1258 aa20.49■□□□□ 0.87
SSB-206ENST00000461708 JADE2Q9NQC1 790 aa20.49■□□□□ 0.87
SSB-206ENST00000461708 ERAP1Q9NZ08 941 aa20.49■□□□□ 0.87
SSB-206ENST00000461708 PCDHA6Q9UN73 950 aa20.49■□□□□ 0.87
SSB-206ENST00000461708 TELO2Q9Y4R8 837 aa20.49■□□□□ 0.87
SSB-206ENST00000461708 PCDHA8Q9Y5H6 950 aa20.49■□□□□ 0.87
SSB-206ENST00000461708 GSTTP1A0A1W2PQM5 241 aa20.48■□□□□ 0.87
SSB-206ENST00000461708 RPLP2P05387 115 aaKnown RBP20.48■□□□□ 0.87
SSB-206ENST00000461708 PPP1R18Q6NYC8 613 aa20.48■□□□□ 0.87
SSB-206ENST00000461708 APOA5Q6Q788 366 aa20.48■□□□□ 0.87
SSB-206ENST00000461708 CENPQQ7L2Z9 268 aaPredicted RBP20.48■□□□□ 0.87
SSB-206ENST00000461708 HEATR3Q7Z4Q2 680 aa20.48■□□□□ 0.87
SSB-206ENST00000461708 MYOCDQ8IZQ8 938 aa20.48■□□□□ 0.87
SSB-206ENST00000461708 GDPD5Q8WTR4 605 aa20.48■□□□□ 0.87
SSB-206ENST00000461708 SAMD11Q96NU1 681 aa20.48■□□□□ 0.87
SSB-206ENST00000461708 LRRC2Q9BYS8 371 aa20.48■□□□□ 0.87
SSB-206ENST00000461708 SMARCAD1Q9H4L7 1026 aa20.48■□□□□ 0.87
SSB-206ENST00000461708 hCG_1642624A0A1W2PR95 340 aa20.47■□□□□ 0.87
SSB-206ENST00000461708 MBLAC1A4D2B0 266 aaPredicted RBP20.47■□□□□ 0.87
SSB-206ENST00000461708 hCG_1984214I3L0E3 225 aa20.47■□□□□ 0.87
SSB-206ENST00000461708 FOSP01100 380 aaPredicted RBP20.47■□□□□ 0.87
SSB-206ENST00000461708 CTSHP09668 335 aa20.47■□□□□ 0.87
SSB-206ENST00000461708 RCAN1P53805 252 aa20.47■□□□□ 0.87
SSB-206ENST00000461708 SP4Q02446 784 aa20.47■□□□□ 0.87
SSB-206ENST00000461708 KRT32Q14532 448 aa20.47■□□□□ 0.87
SSB-206ENST00000461708 UBE2SQ16763 222 aa20.47■□□□□ 0.87
SSB-206ENST00000461708 FAM117BQ6P1L5 589 aa20.47■□□□□ 0.87
SSB-206ENST00000461708 DHX32Q7L7V1 743 aaKnown RBP20.47■□□□□ 0.87
SSB-206ENST00000461708 CCDC82Q8N4S0 544 aa20.47■□□□□ 0.87
SSB-206ENST00000461708 ZNF713Q8N859 430 aaPredicted RBP20.47■□□□□ 0.87
SSB-206ENST00000461708 CNTNAP5Q8WYK1 1306 aa20.47■□□□□ 0.87
SSB-206ENST00000461708 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.46■□□□□ 0.87
SSB-206ENST00000461708 KCNQ1P51787 676 aa20.46■□□□□ 0.87
SSB-206ENST00000461708 FUT2Q10981 343 aa20.46■□□□□ 0.87
SSB-206ENST00000461708 PPFIA1Q13136 1202 aa20.46■□□□□ 0.87
SSB-206ENST00000461708 RSPH3Q86UC2 560 aa20.46■□□□□ 0.87
SSB-206ENST00000461708 RAB11FIP4Q86YS3 637 aa20.46■□□□□ 0.87
SSB-206ENST00000461708 IFIH1Q9BYX4 1025 aaKnown RBP20.46■□□□□ 0.87
SSB-206ENST00000461708 GLT8D2Q9H1C3 349 aa20.46■□□□□ 0.87
SSB-206ENST00000461708 RIC8AQ9NPQ8 531 aa20.46■□□□□ 0.87
SSB-206ENST00000461708 ZBTB43O43298 467 aa20.45■□□□□ 0.86
SSB-206ENST00000461708 CHRNA1P02708 482 aa20.45■□□□□ 0.86
SSB-206ENST00000461708 GRIK4Q16099 956 aa20.45■□□□□ 0.86
SSB-206ENST00000461708 RTN1Q16799 776 aa20.45■□□□□ 0.86
SSB-206ENST00000461708 WWC2Q6AWC2 1192 aa20.45■□□□□ 0.86
SSB-206ENST00000461708 FBXO22Q8NEZ5 403 aa20.45■□□□□ 0.86
SSB-206ENST00000461708 GLG1Q92896 1179 aa20.45■□□□□ 0.86
SSB-206ENST00000461708 TNPO1Q92973 898 aaKnown RBP20.45■□□□□ 0.86
SSB-206ENST00000461708 OSBPL7Q9BZF2 842 aa20.45■□□□□ 0.86
SSB-206ENST00000461708 JPH1Q9HDC5 661 aaPredicted RBP20.45■□□□□ 0.86
SSB-206ENST00000461708 KCNH7Q9NS40 1196 aa20.45■□□□□ 0.86
SSB-206ENST00000461708 TUBE1Q9UJT0 475 aa20.45■□□□□ 0.86
SSB-206ENST00000461708 MTUS1Q9ULD2 1270 aa20.45■□□□□ 0.86
SSB-206ENST00000461708 NFASCO94856 1347 aa20.45■□□□□ 0.86
SSB-206ENST00000461708 RRN3P2A6NIE6 340 aa20.44■□□□□ 0.86
SSB-206ENST00000461708 HMGB1P09429 215 aaKnown RBP20.44■□□□□ 0.86
SSB-206ENST00000461708 MARCH8Q5T0T0 291 aa20.44■□□□□ 0.86
SSB-206ENST00000461708 YME1L1Q96TA2 773 aa20.44■□□□□ 0.86
SSB-206ENST00000461708 MXRA8Q9BRK3 442 aa20.44■□□□□ 0.86
SSB-206ENST00000461708 C17orf80Q9BSJ5 609 aa20.44■□□□□ 0.86
SSB-206ENST00000461708 BRPF3Q9ULD4 1205 aa20.44■□□□□ 0.86
SSB-206ENST00000461708 NAPAP54920 295 aa20.43■□□□□ 0.86
SSB-206ENST00000461708 MGAT3Q09327 533 aa20.43■□□□□ 0.86
SSB-206ENST00000461708 TYW1BQ6NUM6 668 aa20.43■□□□□ 0.86
SSB-206ENST00000461708 RUFY4Q6ZNE9 571 aa20.43■□□□□ 0.86
SSB-206ENST00000461708 MRPL38Q96DV4 380 aaKnown RBP20.43■□□□□ 0.86
SSB-206ENST00000461708 BARHL2Q9NY43 387 aa20.43■□□□□ 0.86
SSB-206ENST00000461708 SLC9A2Q9UBY0 812 aa20.43■□□□□ 0.86
SSB-206ENST00000461708 TTC3P53804 2025 aa20.43■□□□□ 0.86
SSB-206ENST00000461708 RALGAPA2Q2PPJ7 1873 aa20.42■□□□□ 0.86
SSB-206ENST00000461708 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.42■□□□□ 0.86
SSB-206ENST00000461708 STXBP3O00186 592 aa20.42■□□□□ 0.86
SSB-206ENST00000461708 CDC45O75419 566 aa20.42■□□□□ 0.86
SSB-206ENST00000461708 ADCY7P51828 1080 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms