RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 MIS18BP1Q6P0N0 1132 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 EEPD1Q7L9B9 569 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 NIPA1Q7RTP0 329 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 DPP9Q86TI2 863 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 DHX40Q8IX18 779 aaKnown RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 KCTD17Q8N5Z5 321 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 BANK1Q8NDB2 785 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 HAS1Q92839 578 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 GLG1Q92896 1179 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 GPRASP2Q96D09 838 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 PDLIM2Q96JY6 352 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 NAP1L5Q96NT1 182 aaPredicted RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 POLR3CQ9BUI4 534 aaPredicted RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 A1CFQ9NQ94 594 aaKnown RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 PXMP2Q9NR77 195 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 IMPACTQ9P2X3 320 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 CCDC169A6NNP5 214 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 MAFGO15525 162 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 CALUO43852 315 aaPredicted RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 STAM2O75886 525 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 RHOBTB3O94955 611 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 SKILP12757 684 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 ERCC3P19447 782 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 TRIM21P19474 475 aaKnown RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 CDC25BP30305 580 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 PRCPP42785 496 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 MATR3P43243 847 aaKnown RBP eCLIP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 CHMP4BP1P59074 171 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 COASYQ13057 564 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 LRRC41Q15345 812 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 SH3D19Q5HYK7 790 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 ODR4Q5SWX8 454 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 CACNA2D4Q7Z3S7 1137 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 SH3RF1Q7Z6J0 888 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 GPRC5AQ8NFJ5 357 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 BICD1Q96G01 975 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 IFT74Q96LB3 600 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 SCLT1Q96NL6 688 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 IWS1Q96ST2 819 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 NOC4LQ9BVI4 516 aaKnown RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 PARVGQ9HBI0 331 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 SAMSN1Q9NSI8 373 aaKnown RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 PGAP2Q9UHJ9 254 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 PCDHB13Q9Y5F0 798 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 COBLO75128 1261 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 MED24O75448 989 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 EPB41P11171 864 aaKnown RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 KRT13P13646 458 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 EEF1GP26641 437 aaKnown RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 GCLCP48506 637 aaPredicted RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 ZNF157P51786 506 aaPredicted RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 PSMC5P62195 406 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 LRRC63Q05C16 580 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 FMR1Q06787 632 aaKnown RBP eCLIP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 TBC1D8BQ0IIM8 1120 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 NEDD9Q14511 834 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 PGM5Q15124 567 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 TMEM119Q4V9L6 283 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 TREML2Q5T2D2 321 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 NT5DC1Q5TFE4 455 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 FAM160B1Q5W0V3 765 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 CEP135Q66GS9 1140 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 SPECC1LQ69YQ0 1117 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 LBX2Q6XYB7 198 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 CATSPER3Q86XQ3 398 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 RIOX2Q8IUF8 465 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 GUF1Q8N442 669 aaKnown RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 GIMAP8Q8ND71 665 aaPredicted RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 ETNPPLQ8TBG4 499 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 ZNF592Q92610 1267 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 SLC5A5Q92911 643 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 CEP170P1Q96L14 293 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 DRC1Q96MC2 740 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 PNMA5Q96PV4 448 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 MROH8Q9H579 483 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 JPH1Q9HDC5 661 aaPredicted RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 SEPT9Q9UHD8 586 aaPredicted RBP4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 PCDHA10Q9Y5I2 948 aa4.56□□□□□ -1.68
ATP13A3-206ENST00000461660 ADAMTSL1Q8N6G6 1762 aa4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 K7ENM7 598 aa4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 EIF3JO75822 258 aaKnown RBP4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 GNA14O95837 355 aa4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 BCRP11274 1271 aa4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 SARSP49591 514 aaKnown RBP4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 COPB1P53618 953 aaKnown RBP4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 FKBP3Q00688 224 aaKnown RBP4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 MDM2Q00987 491 aaPredicted RBP4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 CETN1Q12798 172 aa4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 TRIM14Q14142 442 aa4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 FAM102BQ5T8I3 360 aa4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 PADI6Q6TGC4 694 aa4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 SFR1Q86XK3 245 aa4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 ADSSL1Q8N142 457 aa4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 RDM1Q8NG50 284 aa4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 IL31RAQ8NI17 732 aa4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 GOLGA5Q8TBA6 731 aa4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 CLEC4DQ8WXI8 215 aa4.55□□□□□ -1.68
ATP13A3-206ENST00000461660 EEF2KMTQ96G04 330 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms