RNA–Protein interactions for RNA: ENST00000461603.5

LMBR1-215, Transcript of limb development membrane protein 1, humanhuman

TSL 4

Gene LMBR1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-215ENST00000461603 SHISA4Q96DD7 197 aa7.03□□□□□ -1.28
LMBR1-215ENST00000461603 MRRFQ96E11 262 aaKnown RBP7.03□□□□□ -1.28
LMBR1-215ENST00000461603 SPON2Q9BUD6 331 aa7.03□□□□□ -1.28
LMBR1-215ENST00000461603 REV1Q9UBZ9 1251 aa7.03□□□□□ -1.28
LMBR1-215ENST00000461603 ADAMTS1Q9UHI8 967 aa7.03□□□□□ -1.28
LMBR1-215ENST00000461603 TSPYL4Q9UJ04 414 aa7.03□□□□□ -1.28
LMBR1-215ENST00000461603 TPX2Q9ULW0 747 aaKnown RBP7.03□□□□□ -1.28
LMBR1-215ENST00000461603 POLR3KQ9Y2Y1 108 aaPredicted RBP7.03□□□□□ -1.28
LMBR1-215ENST00000461603 SSC5DA1L4H1 1573 aa7.03□□□□□ -1.28
LMBR1-215ENST00000461603 ZNF646O15015 1829 aaPredicted RBP7.02□□□□□ -1.29
LMBR1-215ENST00000461603 IRS4O14654 1257 aaPredicted RBP7.02□□□□□ -1.29
LMBR1-215ENST00000461603 IMPDH2P12268 514 aa7.02□□□□□ -1.29
LMBR1-215ENST00000461603 CCNFP41002 786 aa7.02□□□□□ -1.29
LMBR1-215ENST00000461603 ARHGEF6Q15052 776 aa7.02□□□□□ -1.29
LMBR1-215ENST00000461603 DACT2Q5SW24 774 aa7.02□□□□□ -1.29
LMBR1-215ENST00000461603 SPACA3Q8IXA5 215 aa7.02□□□□□ -1.29
LMBR1-215ENST00000461603 MFSD4AQ8N468 514 aa7.02□□□□□ -1.29
LMBR1-215ENST00000461603 ARHGAP39Q9C0H5 1083 aa7.02□□□□□ -1.29
LMBR1-215ENST00000461603 DEFB129Q9H1M3 183 aa7.02□□□□□ -1.29
LMBR1-215ENST00000461603 PAK6Q9NQU5 681 aaPredicted RBP7.02□□□□□ -1.29
LMBR1-215ENST00000461603 LMCD1Q9NZU5 365 aa7.02□□□□□ -1.29
LMBR1-215ENST00000461603 DDX41Q9UJV9 622 aaKnown RBP7.02□□□□□ -1.29
LMBR1-215ENST00000461603 PLAGL2Q9UPG8 496 aa7.02□□□□□ -1.29
LMBR1-215ENST00000461603 PRUNE2Q8WUY3 3088 aa7.02□□□□□ -1.29
LMBR1-215ENST00000461603 XDHP47989 1333 aa7.01□□□□□ -1.29
LMBR1-215ENST00000461603 ADAMTS4O75173 837 aa7.01□□□□□ -1.29
LMBR1-215ENST00000461603 APOBRQ0VD83 1088 aa7.01□□□□□ -1.29
LMBR1-215ENST00000461603 NKPD1Q17RQ9 610 aa7.01□□□□□ -1.29
LMBR1-215ENST00000461603 NFXL1Q6ZNB6 911 aa7.01□□□□□ -1.29
LMBR1-215ENST00000461603 Q7L0L9 218 aa7.01□□□□□ -1.29
LMBR1-215ENST00000461603 ZNF654Q8IZM8 581 aa7.01□□□□□ -1.29
LMBR1-215ENST00000461603 FAM181AQ8N9Y4 354 aa7.01□□□□□ -1.29
LMBR1-215ENST00000461603 FLCNQ8NFG4 579 aa7.01□□□□□ -1.29
LMBR1-215ENST00000461603 DNAJB8Q8NHS0 232 aa7.01□□□□□ -1.29
LMBR1-215ENST00000461603 CCDC74BQ96LY2 380 aa7.01□□□□□ -1.29
LMBR1-215ENST00000461603 ISCA1Q9BUE6 129 aa7.01□□□□□ -1.29
LMBR1-215ENST00000461603 HTATIP2Q9BUP3 242 aa7.01□□□□□ -1.29
LMBR1-215ENST00000461603 GMIPQ9P107 970 aa7.01□□□□□ -1.29
LMBR1-215ENST00000461603 NR2E3Q9Y5X4 410 aa7.01□□□□□ -1.29
LMBR1-215ENST00000461603 OAS3Q9Y6K5 1087 aaKnown RBP7.01□□□□□ -1.29
LMBR1-215ENST00000461603 MYO3BQ8WXR4 1341 aa7.01□□□□□ -1.29
LMBR1-215ENST00000461603 COL1A1P02452 1464 aaPredicted RBP7□□□□□ -1.29
LMBR1-215ENST00000461603 A0A1W2PPC1 479 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 F6X3S4 739 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 RAD51AP2Q09MP3 1159 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 NBPF12Q5TAG4 269 aaPredicted RBP7□□□□□ -1.29
LMBR1-215ENST00000461603 CDCP2Q5VXM1 449 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 CBLL1Q75N03 491 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 TP53INP2Q8IXH6 220 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 DEFB123Q8N688 67 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 RNF141Q8WVD5 230 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 NKD1Q969G9 470 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 OPTNQ96CV9 577 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 ASPNQ9BXN1 380 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 CHPF2Q9P2E5 772 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 STAP2Q9UGK3 403 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 CORINQ9Y5Q5 1042 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 CAPN6Q9Y6Q1 641 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 MUC3AQ02505 3323 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 OTOFQ9HC10 1997 aa7□□□□□ -1.29
LMBR1-215ENST00000461603 MED23Q9ULK4 1368 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 CLRN2A0PK11 232 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 MEIS3P2A8K0S8 358 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 FUT4P22083 530 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 IRAK1P51617 712 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 KIF22Q14807 665 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 NFE2L2Q16236 605 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 KRT24Q2M2I5 525 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 CCDC152Q4G0S7 254 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 STRIP1Q5VSL9 837 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 UBE2Q1Q7Z7E8 422 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 METTL16Q86W50 562 aaKnown RBP6.99□□□□□ -1.29
LMBR1-215ENST00000461603 ANKRD18AQ8IVF6 992 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 ANKRD13AQ8IZ07 590 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 FAM43AQ8N2R8 423 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 PLBD2Q8NHP8 589 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 PPP1R13LQ8WUF5 828 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 BRI3BPQ8WY22 251 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 ZBED3Q96IU2 234 aaPredicted RBP6.99□□□□□ -1.29
LMBR1-215ENST00000461603 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.99□□□□□ -1.292e-8■■■■□ 19.8
LMBR1-215ENST00000461603 BRMS1Q9HCU9 246 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 KCNH3Q9ULD8 1083 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 STXBP5LQ9Y2K9 1186 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 PCDHAC2Q9Y5I4 1007 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 SPEF2Q9C093 1822 aa6.99□□□□□ -1.29
LMBR1-215ENST00000461603 TTC28Q96AY4 2481 aa6.98□□□□□ -1.29
LMBR1-215ENST00000461603 CCL15-CCL14A0A0B4J2E2 113 aa6.98□□□□□ -1.29
LMBR1-215ENST00000461603 RGS13O14921 159 aa6.98□□□□□ -1.29
LMBR1-215ENST00000461603 USP2O75604 605 aaPredicted RBP6.98□□□□□ -1.29
LMBR1-215ENST00000461603 FARP2O94887 1054 aaPredicted RBP6.98□□□□□ -1.29
LMBR1-215ENST00000461603 PPP2R1AP30153 589 aa6.98□□□□□ -1.29
LMBR1-215ENST00000461603 CRKP46108 304 aa6.98□□□□□ -1.29
LMBR1-215ENST00000461603 GJA8P48165 433 aa6.98□□□□□ -1.29
LMBR1-215ENST00000461603 LACTBP83111 547 aaPredicted RBP6.98□□□□□ -1.29
LMBR1-215ENST00000461603 DLGAP5Q15398 846 aa6.98□□□□□ -1.29
LMBR1-215ENST00000461603 CCL15Q16663 113 aa6.98□□□□□ -1.29
LMBR1-215ENST00000461603 SUPT20HL1Q3ZLR7 823 aa6.98□□□□□ -1.29
LMBR1-215ENST00000461603 TTLL5Q6EMB2 1281 aa6.98□□□□□ -1.29
LMBR1-215ENST00000461603 WFDC3Q8IUB2 231 aa6.98□□□□□ -1.29
LMBR1-215ENST00000461603 FBXO27Q8NI29 283 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms