RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 KCTD1Q719H9 257 aa6.61□□□□□ -1.35
UBA3-204ENST00000461522 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.61□□□□□ -1.35
UBA3-204ENST00000461522 PTPRN2Q92932 1015 aa6.61□□□□□ -1.35
UBA3-204ENST00000461522 CDC6Q99741 560 aa6.61□□□□□ -1.35
UBA3-204ENST00000461522 AQP7O14520 342 aa6.6□□□□□ -1.35
UBA3-204ENST00000461522 FAM153BP0C7A2 387 aa6.6□□□□□ -1.35
UBA3-204ENST00000461522 GTF2F1P35269 517 aaKnown RBP eCLIP6.6□□□□□ -1.35
UBA3-204ENST00000461522 RBL2Q08999 1139 aa6.6□□□□□ -1.35
UBA3-204ENST00000461522 PAK1Q13153 545 aa6.6□□□□□ -1.35
UBA3-204ENST00000461522 RASA3Q14644 834 aa6.6□□□□□ -1.35
UBA3-204ENST00000461522 ZNF827Q17R98 1081 aa6.6□□□□□ -1.35
UBA3-204ENST00000461522 LONRF2Q1L5Z9 754 aa6.6□□□□□ -1.35
UBA3-204ENST00000461522 CD276Q5ZPR3 534 aa6.6□□□□□ -1.35
UBA3-204ENST00000461522 TRMT10BQ6PF06 316 aaKnown RBP6.6□□□□□ -1.35
UBA3-204ENST00000461522 SH3RF2Q8TEC5 729 aa6.6□□□□□ -1.35
UBA3-204ENST00000461522 EXOC2Q96KP1 924 aa6.6□□□□□ -1.35
UBA3-204ENST00000461522 SSBP3Q9BWW4 388 aaPredicted RBP6.6□□□□□ -1.35
UBA3-204ENST00000461522 TCRBV5S4A2TA0A5A2 114 aa6.59□□□□□ -1.35
UBA3-204ENST00000461522 ACOT7O00154 380 aa6.59□□□□□ -1.35
UBA3-204ENST00000461522 CHGBP05060 677 aa6.59□□□□□ -1.35
UBA3-204ENST00000461522 CKMP06732 381 aa6.59□□□□□ -1.35
UBA3-204ENST00000461522 MAGEA10P43363 369 aaPredicted RBP6.59□□□□□ -1.35
UBA3-204ENST00000461522 SURF1Q15526 300 aa6.59□□□□□ -1.35
UBA3-204ENST00000461522 LRP10Q7Z4F1 713 aa6.59□□□□□ -1.35
UBA3-204ENST00000461522 PLEKHH3Q7Z736 793 aa6.59□□□□□ -1.35
UBA3-204ENST00000461522 KLHL36Q8N4N3 616 aa6.59□□□□□ -1.35
UBA3-204ENST00000461522 FTSJ1Q9UET6 329 aa6.59□□□□□ -1.35
UBA3-204ENST00000461522 JAG2Q9Y219 1238 aa6.59□□□□□ -1.35
UBA3-204ENST00000461522 ARVCFO00192 962 aa6.58□□□□□ -1.36
UBA3-204ENST00000461522 KLHL18O94889 574 aa6.58□□□□□ -1.36
UBA3-204ENST00000461522 SKIDA1Q1XH10 827 aa6.58□□□□□ -1.36
UBA3-204ENST00000461522 PHF19Q5T6S3 580 aa6.58□□□□□ -1.36
UBA3-204ENST00000461522 MTDHQ86UE4 582 aaKnown RBP6.58□□□□□ -1.36
UBA3-204ENST00000461522 GGNQ86UU5 652 aa6.58□□□□□ -1.36
UBA3-204ENST00000461522 TTC9BQ8N6N2 239 aa6.58□□□□□ -1.36
UBA3-204ENST00000461522 PCDH19Q8TAB3 1148 aa6.58□□□□□ -1.36
UBA3-204ENST00000461522 BORCS6Q96GS4 357 aa6.58□□□□□ -1.36
UBA3-204ENST00000461522 SAMD11Q96NU1 681 aa6.58□□□□□ -1.36
UBA3-204ENST00000461522 IPO9Q96P70 1041 aaKnown RBP6.58□□□□□ -1.36
UBA3-204ENST00000461522 CD244Q9BZW8 370 aa6.58□□□□□ -1.36
UBA3-204ENST00000461522 SMPD4Q9NXE4 827 aa6.58□□□□□ -1.36
UBA3-204ENST00000461522 KDM2BQ8NHM5 1336 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 FAM221BA6H8Z2 402 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 ZNF839A8K0R7 811 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 LAMTOR5O43504 91 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 KNG1P01042 644 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 ENO2P09104 434 aaPredicted RBP6.57□□□□□ -1.36
UBA3-204ENST00000461522 GABREP78334 506 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 ADAM17P78536 824 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 PFKPQ01813 784 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 NFATC3Q12968 1075 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 GPR19Q15760 415 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 SMAD2Q15796 467 aaKnown RBP6.57□□□□□ -1.36
UBA3-204ENST00000461522 NUDT10Q8NFP7 164 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 NUDT11Q96G61 164 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 DEPDC7Q96QD5 511 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 DHRS4Q9BTZ2 278 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 KRTAP3-1Q9BYR8 98 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 KCND1Q9NSA2 647 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 SNTG2Q9NY99 539 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 ZFP69BQ9UJL9 534 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 ADAM29Q9UKF5 820 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 SRPK3Q9UPE1 567 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 MRPS23Q9Y3D9 190 aaKnown RBP6.57□□□□□ -1.36
UBA3-204ENST00000461522 PCDHA8Q9Y5H6 950 aa6.57□□□□□ -1.36
UBA3-204ENST00000461522 ZNF536O15090 1300 aa6.56□□□□□ -1.36
UBA3-204ENST00000461522 NAT1P18440 290 aa6.56□□□□□ -1.36
UBA3-204ENST00000461522 GUCY1A3Q02108 690 aa6.56□□□□□ -1.36
UBA3-204ENST00000461522 ZC3H12BQ5HYM0 836 aaKnown RBP6.56□□□□□ -1.36
UBA3-204ENST00000461522 ARHGAP36Q6ZRI8 547 aa6.56□□□□□ -1.36
UBA3-204ENST00000461522 KBTBD2Q8IY47 623 aa6.56□□□□□ -1.36
UBA3-204ENST00000461522 NLGN4XQ8N0W4 816 aa6.56□□□□□ -1.36
UBA3-204ENST00000461522 IGDCC4Q8TDY8 1250 aa6.56□□□□□ -1.36
UBA3-204ENST00000461522 KISS1RQ969F8 398 aaPredicted RBP6.56□□□□□ -1.36
UBA3-204ENST00000461522 FBXW5Q969U6 566 aa6.56□□□□□ -1.36
UBA3-204ENST00000461522 KRTAP4-5Q9BYR2 181 aa6.56□□□□□ -1.36
UBA3-204ENST00000461522 BARX1Q9HBU1 254 aaPredicted RBP6.56□□□□□ -1.36
UBA3-204ENST00000461522 PPP4R1LQ9P1A2 415 aa6.56□□□□□ -1.36
UBA3-204ENST00000461522 ARHGAP20Q9P2F6 1191 aa6.56□□□□□ -1.36
UBA3-204ENST00000461522 MAN2B1O00754 1011 aa6.55□□□□□ -1.36
UBA3-204ENST00000461522 IL18BPO95998 194 aa6.55□□□□□ -1.36
UBA3-204ENST00000461522 AMY2AP04746 511 aa6.55□□□□□ -1.36
UBA3-204ENST00000461522 AMY2BP19961 511 aa6.55□□□□□ -1.36
UBA3-204ENST00000461522 GLRBP48167 497 aa6.55□□□□□ -1.36
UBA3-204ENST00000461522 EPHB4P54760 987 aa6.55□□□□□ -1.36
UBA3-204ENST00000461522 GLB1LQ6UWU2 654 aa6.55□□□□□ -1.36
UBA3-204ENST00000461522 Q6ZUG5 572 aa6.55□□□□□ -1.36
UBA3-204ENST00000461522 C16orf59Q7L2K0 433 aa6.55□□□□□ -1.36
UBA3-204ENST00000461522 LIMS2Q7Z4I7 341 aa6.55□□□□□ -1.36
UBA3-204ENST00000461522 STPG3Q8N7X2 389 aa6.55□□□□□ -1.36
UBA3-204ENST00000461522 LOXL4Q96JB6 756 aa6.55□□□□□ -1.36
UBA3-204ENST00000461522 C1QTNF3Q9BXJ4 246 aa6.55□□□□□ -1.36
UBA3-204ENST00000461522 CBLCQ9ULV8 474 aa6.55□□□□□ -1.36
UBA3-204ENST00000461522 FAM90A27PA6NNH2 459 aa6.54□□□□□ -1.36
UBA3-204ENST00000461522 FBXO21O94952 628 aa6.54□□□□□ -1.36
UBA3-204ENST00000461522 PYGMP11217 842 aa6.54□□□□□ -1.36
UBA3-204ENST00000461522 PDE6AP16499 860 aa6.54□□□□□ -1.36
UBA3-204ENST00000461522 PTPN1P18031 435 aaKnown RBP6.54□□□□□ -1.36
UBA3-204ENST00000461522 PPP2CBP62714 309 aa6.54□□□□□ -1.36
UBA3-204ENST00000461522 PPP2CAP67775 309 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms