RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 DGKIO75912 1065 aa14.82□□□□□ -0.04
C9orf78-202ENST00000461349 RGS20O76081 388 aa14.82□□□□□ -0.04
C9orf78-202ENST00000461349 GLP2RO95838 553 aa14.82□□□□□ -0.04
C9orf78-202ENST00000461349 ITGB1P05556 798 aa14.82□□□□□ -0.04
C9orf78-202ENST00000461349 GHRP10912 638 aa14.82□□□□□ -0.04
C9orf78-202ENST00000461349 DNAJB1P25685 340 aa14.82□□□□□ -0.04
C9orf78-202ENST00000461349 ARHGAP4P98171 946 aa14.82□□□□□ -0.04
C9orf78-202ENST00000461349 QRICH1Q2TAL8 776 aa14.82□□□□□ -0.04
C9orf78-202ENST00000461349 MCTP2Q6DN12 878 aa14.82□□□□□ -0.04
C9orf78-202ENST00000461349 ADGRF4Q8IZF3 695 aa14.82□□□□□ -0.04
C9orf78-202ENST00000461349 MIER1Q8N108 512 aa14.82□□□□□ -0.04
C9orf78-202ENST00000461349 SPPL3Q8TCT6 385 aa14.82□□□□□ -0.04
C9orf78-202ENST00000461349 POF1BQ8WVV4 589 aa14.82□□□□□ -0.04
C9orf78-202ENST00000461349 NKD2Q969F2 451 aaPredicted RBP14.82□□□□□ -0.04
C9orf78-202ENST00000461349 PDCD2LQ9BRP1 358 aa14.82□□□□□ -0.04
C9orf78-202ENST00000461349 TLE6Q9H808 572 aa14.82□□□□□ -0.04
C9orf78-202ENST00000461349 ZNF215Q9UL58 517 aaPredicted RBP14.82□□□□□ -0.04
C9orf78-202ENST00000461349 MRPL42Q9Y6G3 142 aaKnown RBP14.82□□□□□ -0.04
C9orf78-202ENST00000461349 ENPP3O14638 875 aa14.81□□□□□ -0.04
C9orf78-202ENST00000461349 SRGAP2BP0DMP2 458 aa14.81□□□□□ -0.04
C9orf78-202ENST00000461349 SP2Q02086 613 aa14.81□□□□□ -0.04
C9orf78-202ENST00000461349 ALX1Q15699 326 aa14.81□□□□□ -0.04
C9orf78-202ENST00000461349 VPS53Q5VIR6 699 aa14.81□□□□□ -0.04
C9orf78-202ENST00000461349 RSPH3Q86UC2 560 aa14.81□□□□□ -0.04
C9orf78-202ENST00000461349 CMTR2Q8IYT2 770 aaKnown RBP14.81□□□□□ -0.04
C9orf78-202ENST00000461349 KLHL23Q8NBE8 558 aa14.81□□□□□ -0.04
C9orf78-202ENST00000461349 MICAL1Q8TDZ2 1067 aa14.81□□□□□ -0.04
C9orf78-202ENST00000461349 NEK1Q96PY6 1258 aa14.81□□□□□ -0.04
C9orf78-202ENST00000461349 MAP3K20Q9NYL2 800 aaKnown RBP14.81□□□□□ -0.04
C9orf78-202ENST00000461349 MYO10Q9HD67 2058 aa14.81□□□□□ -0.04
C9orf78-202ENST00000461349 DMDP11532 3685 aa14.8□□□□□ -0.04
C9orf78-202ENST00000461349 PDGFBP01127 241 aaPredicted RBP14.8□□□□□ -0.04
C9orf78-202ENST00000461349 CHRNA1P02708 482 aa14.8□□□□□ -0.04
C9orf78-202ENST00000461349 PCP11498 1178 aaKnown RBP14.8□□□□□ -0.04
C9orf78-202ENST00000461349 CCND2P30279 289 aa14.8□□□□□ -0.04
C9orf78-202ENST00000461349 HSD17B4P51659 736 aa14.8□□□□□ -0.04
C9orf78-202ENST00000461349 PGM5Q15124 567 aa14.8□□□□□ -0.04
C9orf78-202ENST00000461349 ASPRV1Q53RT3 343 aa14.8□□□□□ -0.04
C9orf78-202ENST00000461349 MFSD6Q6ZSS7 791 aa14.8□□□□□ -0.04
C9orf78-202ENST00000461349 LMBR1Q8WVP7 490 aa14.8□□□□□ -0.04
C9orf78-202ENST00000461349 EHMT1Q9H9B1 1298 aa14.8□□□□□ -0.04
C9orf78-202ENST00000461349 FGAP02671 866 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 HNRNPUQ00839 825 aaKnown RBP eCLIP14.79□□□□□ -0.04
C9orf78-202ENST00000461349 MTMR3Q13615 1198 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 LPIN1Q14693 890 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 GNPTABQ3T906 1256 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 FNDC1Q4ZHG4 1894 aaPredicted RBP14.79□□□□□ -0.04
C9orf78-202ENST00000461349 TAF2Q6P1X5 1199 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 STOX1Q6ZVD7 989 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 VSIG10LQ86VR7 867 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 DGKHQ86XP1 1220 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 UBALD2Q8IYN6 164 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 ADSSL1Q8N142 457 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 PNMA1Q8ND90 353 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 PI4K2BQ8TCG2 481 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 SUSD6Q92537 303 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 NRCAMQ92823 1304 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 AMNQ9BXJ7 453 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 KAT14Q9H8E8 782 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 VAT1LQ9HCJ6 419 aa14.79□□□□□ -0.04
C9orf78-202ENST00000461349 LAMA4Q16363 1823 aa14.78□□□□□ -0.04
C9orf78-202ENST00000461349 PPFIA3O75145 1194 aa14.78□□□□□ -0.04
C9orf78-202ENST00000461349 STAG3L1P0CL83 205 aa14.78□□□□□ -0.04
C9orf78-202ENST00000461349 NEDD9Q14511 834 aa14.78□□□□□ -0.04
C9orf78-202ENST00000461349 PAN2Q504Q3 1202 aaKnown RBP14.78□□□□□ -0.04
C9orf78-202ENST00000461349 CCDC178Q5BJE1 867 aa14.78□□□□□ -0.04
C9orf78-202ENST00000461349 FRMD5Q7Z6J6 570 aa14.78□□□□□ -0.04
C9orf78-202ENST00000461349 NPAS4Q8IUM7 802 aa14.78□□□□□ -0.04
C9orf78-202ENST00000461349 ESR2Q92731 530 aa14.78□□□□□ -0.04
C9orf78-202ENST00000461349 CDCA3Q99618 268 aaPredicted RBP14.78□□□□□ -0.04
C9orf78-202ENST00000461349 ZKSCAN3Q9BRR0 538 aa14.78□□□□□ -0.04
C9orf78-202ENST00000461349 RNF41Q9H4P4 317 aaPredicted RBP14.78□□□□□ -0.04
C9orf78-202ENST00000461349 DCTPP1Q9H773 170 aa14.78□□□□□ -0.04
C9orf78-202ENST00000461349 SORCS3Q9UPU3 1222 aa14.78□□□□□ -0.04
C9orf78-202ENST00000461349 NR2E1Q9Y466 385 aa14.78□□□□□ -0.04
C9orf78-202ENST00000461349 VPS13AQ96RL7 3174 aa14.78□□□□□ -0.04
C9orf78-202ENST00000461349 ZMYM6O95789 1325 aa14.77□□□□□ -0.04
C9orf78-202ENST00000461349 PER2O15055 1255 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 HOXA13P31271 388 aaPredicted RBP14.77□□□□□ -0.05
C9orf78-202ENST00000461349 HAND2P61296 217 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 ADAM17P78536 824 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 GHRHRQ02643 423 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 UBE3AQ05086 875 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 FBXO47Q5MNV8 452 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 UTP14CQ5TAP6 766 aaKnown RBP14.77□□□□□ -0.05
C9orf78-202ENST00000461349 METTL7BQ6UX53 244 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 TSHZ1Q6ZSZ6 1077 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 IQCA1Q86XH1 822 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 TRIM50Q86XT4 487 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 SAMD3Q8N6K7 520 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 TMEM105Q8N8V8 129 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 KREMEN2Q8NCW0 462 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 ATP8B4Q8TF62 1192 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 GPKOWQ92917 476 aaPredicted RBP eCLIP14.77□□□□□ -0.05
C9orf78-202ENST00000461349 FTHL17Q9BXU8 183 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 MFSD1Q9H3U5 465 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 JMJD4Q9H9V9 463 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 HELLSQ9NRZ9 838 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 PCDHB12Q9Y5F1 795 aa14.77□□□□□ -0.05
C9orf78-202ENST00000461349 PCDHGC5Q9Y5F6 944 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms