RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 SYNE3Q6ZMZ3 975 aa17.35■□□□□ 0.37
COL16A1-206ENST00000461217 MICU3Q86XE3 530 aa17.35■□□□□ 0.37
COL16A1-206ENST00000461217 GPRASP2Q96D09 838 aa17.35■□□□□ 0.37
COL16A1-206ENST00000461217 CDHR1Q96JP9 859 aa17.35■□□□□ 0.37
COL16A1-206ENST00000461217 SUGCTQ9HAC7 445 aa17.35■□□□□ 0.37
COL16A1-206ENST00000461217 PKD2L1Q9P0L9 805 aa17.35■□□□□ 0.37
COL16A1-206ENST00000461217 TELO2Q9Y4R8 837 aa17.35■□□□□ 0.37
COL16A1-206ENST00000461217 VCANP13611 3396 aa17.34■□□□□ 0.37
COL16A1-206ENST00000461217 UPP2O95045 317 aa17.34■□□□□ 0.37
COL16A1-206ENST00000461217 HEATR3Q7Z4Q2 680 aa17.34■□□□□ 0.37
COL16A1-206ENST00000461217 LMBR1Q8WVP7 490 aa17.34■□□□□ 0.37
COL16A1-206ENST00000461217 UPF2Q9HAU5 1272 aaKnown RBP17.34■□□□□ 0.37
COL16A1-206ENST00000461217 LMCD1Q9NZU5 365 aa17.34■□□□□ 0.37
COL16A1-206ENST00000461217 CHD7Q9P2D1 2997 aa17.34■□□□□ 0.37
COL16A1-206ENST00000461217 SIP14410 1827 aa17.33■□□□□ 0.37
COL16A1-206ENST00000461217 MTMR1Q13613 665 aa17.33■□□□□ 0.36
COL16A1-206ENST00000461217 COL9A3Q14050 684 aaPredicted RBP17.33■□□□□ 0.36
COL16A1-206ENST00000461217 RNF20Q5VTR2 975 aa17.33■□□□□ 0.36
COL16A1-206ENST00000461217 TMTC3Q6ZXV5 915 aa17.33■□□□□ 0.36
COL16A1-206ENST00000461217 FANCBQ8NB91 859 aa17.33■□□□□ 0.36
COL16A1-206ENST00000461217 FBXO22Q8NEZ5 403 aa17.33■□□□□ 0.36
COL16A1-206ENST00000461217 YME1L1Q96TA2 773 aa17.33■□□□□ 0.36
COL16A1-206ENST00000461217 EHMT1Q9H9B1 1298 aa17.33■□□□□ 0.36
COL16A1-206ENST00000461217 SPTBN5Q9NRC6 3674 aaKnown RBP17.33■□□□□ 0.36
COL16A1-206ENST00000461217 MICAL3Q7RTP6 2002 aa17.32■□□□□ 0.36
COL16A1-206ENST00000461217 NRCAMQ92823 1304 aa17.32■□□□□ 0.36
COL16A1-206ENST00000461217 ATP9AO75110 1047 aa17.32■□□□□ 0.36
COL16A1-206ENST00000461217 MARK3P27448 753 aa17.32■□□□□ 0.36
COL16A1-206ENST00000461217 PPFIA1Q13136 1202 aa17.32■□□□□ 0.36
COL16A1-206ENST00000461217 NECTIN1Q15223 517 aa17.32■□□□□ 0.36
COL16A1-206ENST00000461217 SEPT1Q8WYJ6 367 aa17.32■□□□□ 0.36
COL16A1-206ENST00000461217 APBB2Q92870 758 aa17.32■□□□□ 0.36
COL16A1-206ENST00000461217 GLG1Q92896 1179 aa17.32■□□□□ 0.36
COL16A1-206ENST00000461217 C17orf80Q9BSJ5 609 aa17.32■□□□□ 0.36
COL16A1-206ENST00000461217 IFIH1Q9BYX4 1025 aaKnown RBP17.32■□□□□ 0.36
COL16A1-206ENST00000461217 KCNA2P16389 499 aa17.31■□□□□ 0.36
COL16A1-206ENST00000461217 ITGB5P18084 799 aa17.31■□□□□ 0.36
COL16A1-206ENST00000461217 COL9A1P20849 921 aa17.31■□□□□ 0.36
COL16A1-206ENST00000461217 HTRA4P83105 476 aaPredicted RBP17.31■□□□□ 0.36
COL16A1-206ENST00000461217 MKRN4PQ13434 485 aaPredicted RBP17.31■□□□□ 0.36
COL16A1-206ENST00000461217 OSBPL7Q9BZF2 842 aa17.31■□□□□ 0.36
COL16A1-206ENST00000461217 ERAP1Q9NZ08 941 aa17.31■□□□□ 0.36
COL16A1-206ENST00000461217 PCDHA6Q9UN73 950 aa17.31■□□□□ 0.36
COL16A1-206ENST00000461217 PCDHA8Q9Y5H6 950 aa17.31■□□□□ 0.36
COL16A1-206ENST00000461217 TCF20Q9UGU0 1960 aaKnown RBP17.31■□□□□ 0.36
COL16A1-206ENST00000461217 PRRC2BQ5JSZ5 2229 aaKnown RBP17.31■□□□□ 0.36
COL16A1-206ENST00000461217 NAPAP54920 295 aa17.3■□□□□ 0.36
COL16A1-206ENST00000461217 TAF2Q6P1X5 1199 aa17.3■□□□□ 0.36
COL16A1-206ENST00000461217 RSPH3Q86UC2 560 aa17.3■□□□□ 0.36
COL16A1-206ENST00000461217 TOP1MTQ969P6 601 aa17.3■□□□□ 0.36
COL16A1-206ENST00000461217 SAMD11Q96NU1 681 aa17.3■□□□□ 0.36
COL16A1-206ENST00000461217 NEK1Q96PY6 1258 aa17.3■□□□□ 0.36
COL16A1-206ENST00000461217 TUBE1Q9UJT0 475 aa17.3■□□□□ 0.36
COL16A1-206ENST00000461217 UBIAD1Q9Y5Z9 338 aa17.3■□□□□ 0.36
COL16A1-206ENST00000461217 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.29■□□□□ 0.36
COL16A1-206ENST00000461217 GSTTP1A0A1W2PQM5 241 aa17.29■□□□□ 0.36
COL16A1-206ENST00000461217 REC8O95072 547 aa17.29■□□□□ 0.36
COL16A1-206ENST00000461217 GHRP10912 638 aa17.29■□□□□ 0.36
COL16A1-206ENST00000461217 IGBP1P78318 339 aa17.29■□□□□ 0.36
COL16A1-206ENST00000461217 ADAM17P78536 824 aa17.29■□□□□ 0.36
COL16A1-206ENST00000461217 GRIK4Q16099 956 aa17.29■□□□□ 0.36
COL16A1-206ENST00000461217 PTPROQ16827 1216 aa17.29■□□□□ 0.36
COL16A1-206ENST00000461217 FAM26DQ5JW98 314 aa17.29■□□□□ 0.36
COL16A1-206ENST00000461217 APOA5Q6Q788 366 aa17.29■□□□□ 0.36
COL16A1-206ENST00000461217 RUFY4Q6ZNE9 571 aa17.29■□□□□ 0.36
COL16A1-206ENST00000461217 SGMS1Q86VZ5 419 aa17.29■□□□□ 0.36
COL16A1-206ENST00000461217 SP7Q8TDD2 431 aaPredicted RBP17.29■□□□□ 0.36
COL16A1-206ENST00000461217 SMARCAD1Q9H4L7 1026 aa17.29■□□□□ 0.36
COL16A1-206ENST00000461217 JADE2Q9NQC1 790 aa17.29■□□□□ 0.36
COL16A1-206ENST00000461217 RBM28Q9NW13 759 aaKnown RBP17.29■□□□□ 0.36
COL16A1-206ENST00000461217 CNTNAP5Q8WYK1 1306 aa17.28■□□□□ 0.36
COL16A1-206ENST00000461217 RTN1Q16799 776 aa17.28■□□□□ 0.36
COL16A1-206ENST00000461217 EPC2Q52LR7 807 aa17.28■□□□□ 0.36
COL16A1-206ENST00000461217 WWC2Q6AWC2 1192 aa17.28■□□□□ 0.36
COL16A1-206ENST00000461217 TCEANC2Q96MN5 208 aa17.28■□□□□ 0.36
COL16A1-206ENST00000461217 AZI2Q9H6S1 392 aa17.28■□□□□ 0.36
COL16A1-206ENST00000461217 JPH1Q9HDC5 661 aaPredicted RBP17.28■□□□□ 0.36
COL16A1-206ENST00000461217 NAP1L2Q9ULW6 460 aaPredicted RBP17.28■□□□□ 0.36
COL16A1-206ENST00000461217 MAFGO15525 162 aa17.27■□□□□ 0.36
COL16A1-206ENST00000461217 ZBTB43O43298 467 aa17.27■□□□□ 0.36
COL16A1-206ENST00000461217 CHRNA1P02708 482 aa17.27■□□□□ 0.36
COL16A1-206ENST00000461217 ADCY7P51828 1080 aa17.27■□□□□ 0.36
COL16A1-206ENST00000461217 DNAJB3Q8WWF6 145 aa17.27■□□□□ 0.36
COL16A1-206ENST00000461217 MRPL38Q96DV4 380 aaKnown RBP17.27■□□□□ 0.36
COL16A1-206ENST00000461217 PGBD1Q96JS3 809 aa17.27■□□□□ 0.36
COL16A1-206ENST00000461217 SDF4Q9BRK5 362 aa17.27■□□□□ 0.36
COL16A1-206ENST00000461217 UBE2ZQ9H832 354 aaPredicted RBP17.27■□□□□ 0.36
COL16A1-206ENST00000461217 SLC9A2Q9UBY0 812 aa17.27■□□□□ 0.36
COL16A1-206ENST00000461217 TRPC6Q9Y210 931 aa17.27■□□□□ 0.36
COL16A1-206ENST00000461217 GOLGA8AA7E2F4 631 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 GOLGA8BA8MQT2 603 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 KCNA5P22460 613 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 FGD1P98174 961 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 GPM6BQ13491 265 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 TIGD5Q53EQ6 642 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 PPP1R18Q6NYC8 613 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 RPAINQ86UA6 219 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 TMEM192Q8IY95 271 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 FIBCD1Q8N539 461 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 TNPO1Q92973 898 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms