RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 UPF3AQ9H1J1 476 aaKnown RBP11.46□□□□□ -0.57
UPF2-204ENST00000460569 PAK6Q9NQU5 681 aaPredicted RBP11.46□□□□□ -0.57
UPF2-204ENST00000460569 RCOR1Q9UKL0 485 aa11.46□□□□□ -0.57
UPF2-204ENST00000460569 Q9Y3F1 56 aa11.46□□□□□ -0.57
UPF2-204ENST00000460569 TELO2Q9Y4R8 837 aa11.46□□□□□ -0.57
UPF2-204ENST00000460569 SAMM50Q9Y512 469 aa11.46□□□□□ -0.57
UPF2-204ENST00000460569 MORC2Q9Y6X9 1032 aaPredicted RBP11.46□□□□□ -0.57
UPF2-204ENST00000460569 MYH9P35579 1960 aaKnown RBP11.46□□□□□ -0.58
UPF2-204ENST00000460569 MYADML2A6NDP7 307 aa11.45□□□□□ -0.58
UPF2-204ENST00000460569 MMP3P08254 477 aa11.45□□□□□ -0.58
UPF2-204ENST00000460569 SFNP31947 248 aa11.45□□□□□ -0.58
UPF2-204ENST00000460569 CPT1AP50416 773 aa11.45□□□□□ -0.58
UPF2-204ENST00000460569 GJA9P57773 515 aa11.45□□□□□ -0.58
UPF2-204ENST00000460569 IRX5P78411 483 aaPredicted RBP11.45□□□□□ -0.58
UPF2-204ENST00000460569 BEX3Q00994 111 aa11.45□□□□□ -0.58
UPF2-204ENST00000460569 GRIN1Q05586 938 aa11.45□□□□□ -0.58
UPF2-204ENST00000460569 SPIRE1Q08AE8 756 aa11.45□□□□□ -0.58
UPF2-204ENST00000460569 FSCN1Q16658 493 aaKnown RBP11.45□□□□□ -0.58
UPF2-204ENST00000460569 BRDTQ58F21 947 aaPredicted RBP11.45□□□□□ -0.58
UPF2-204ENST00000460569 MIS18BP1Q6P0N0 1132 aa11.45□□□□□ -0.58
UPF2-204ENST00000460569 SMAP1Q8IYB5 467 aaPredicted RBP11.45□□□□□ -0.58
UPF2-204ENST00000460569 DEFB118Q96PH6 123 aa11.45□□□□□ -0.58
UPF2-204ENST00000460569 GPR20Q99678 358 aa11.45□□□□□ -0.58
UPF2-204ENST00000460569 DISC1Q9NRI5 854 aa11.45□□□□□ -0.58
UPF2-204ENST00000460569 LRWD1Q9UFC0 647 aa11.45□□□□□ -0.58
UPF2-204ENST00000460569 SRPRBQ9Y5M8 271 aaKnown RBP11.45□□□□□ -0.58
UPF2-204ENST00000460569 POTEFA5A3E0 1075 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 PP2D1A8MPX8 630 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 EML1O00423 815 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 BACH1O14867 736 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 CUTAO60888 179 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 ADAMTS4O75173 837 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 PSAPP07602 524 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 SUPT20HL2P0C7V6 817 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 TCF7P36402 384 aaPredicted RBP11.44□□□□□ -0.58
UPF2-204ENST00000460569 LONP1P36776 959 aaKnown RBP11.44□□□□□ -0.58
UPF2-204ENST00000460569 DGKDQ16760 1214 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 CSPP1Q1MSJ5 1256 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 TPRNQ4KMQ1 711 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 UTP14CQ5TAP6 766 aaKnown RBP11.44□□□□□ -0.58
UPF2-204ENST00000460569 LHX8Q68G74 356 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 B3GNT9Q6UX72 402 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 RNF180Q86T96 592 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 IGSF22Q8N9C0 903 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 RDM1Q8NG50 284 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 ERMNQ8TAM6 284 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 SEPT1Q8WYJ6 367 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 CLIC6Q96NY7 704 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 GBP4Q96PP9 640 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 CSRNP2Q9H175 543 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 PCDHA10Q9Y5I2 948 aa11.44□□□□□ -0.58
UPF2-204ENST00000460569 EMSYQ7Z589 1322 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 GSTTP1A0A1W2PQM5 241 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 A6NJR5 290 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 CTAGE5O15320 804 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 ZEB2O60315 1214 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 MYL3P08590 195 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 ZNF286BP0CG31 522 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 PDIA5Q14554 519 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 LRRC41Q15345 812 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 EPHA7Q15375 998 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 GNASQ5JWF2 1037 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 SPECC1Q5M775 1068 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 FAM160B1Q5W0V3 765 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 HAUS3Q68CZ6 603 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 ABHD15Q6UXT9 468 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 TRIM50Q86XT4 487 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 CCDC60Q8IWA6 550 aaPredicted RBP11.43□□□□□ -0.58
UPF2-204ENST00000460569 BANK1Q8NDB2 785 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 SNX29Q8TEQ0 813 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 U2AF1L4Q8WU68 220 aaKnown RBP11.43□□□□□ -0.58
UPF2-204ENST00000460569 AK8Q96MA6 479 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 EIF2AK1Q9BQI3 630 aaKnown RBP11.43□□□□□ -0.58
UPF2-204ENST00000460569 TMEM106CQ9BVX2 250 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 GABBR1Q9UBS5 961 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 PCDHA7Q9UN72 937 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 ARID2Q68CP9 1835 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 LOXHD1Q8IVV2 1947 aa11.43□□□□□ -0.58
UPF2-204ENST00000460569 IGSF9BQ9UPX0 1349 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 KBTBD13C9JR72 458 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 PPFIA4O75335 1185 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 ATG7O95352 703 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 LGALS2P05162 132 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 GJB1P08034 283 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 HOXD8P13378 290 aaPredicted RBP11.42□□□□□ -0.58
UPF2-204ENST00000460569 CST5P28325 142 aaPredicted RBP11.42□□□□□ -0.58
UPF2-204ENST00000460569 CDC25AP30304 524 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 TXLNAP40222 546 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 CCT6AP40227 531 aaKnown RBP11.42□□□□□ -0.58
UPF2-204ENST00000460569 UBA7P41226 1012 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 CYP4A11Q02928 519 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 ZRSR1Q15695 479 aaKnown RBP11.42□□□□□ -0.58
UPF2-204ENST00000460569 UGCGQ16739 394 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 AXDND1Q5T1B0 1012 aaPredicted RBP11.42□□□□□ -0.58
UPF2-204ENST00000460569 COL13A1Q5TAT6 717 aaPredicted RBP11.42□□□□□ -0.58
UPF2-204ENST00000460569 KRT79Q5XKE5 535 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 SWSAP1Q6NVH7 229 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 CLEC17AQ6ZS10 378 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 PCSK9Q8NBP7 692 aaKnown RBP11.42□□□□□ -0.58
UPF2-204ENST00000460569 ARRDC4Q8NCT1 418 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms