RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 FIGNQ5HY92 759 aa6.63□□□□□ -1.35
VBP1-202ENST00000460509 LCE1DQ5T752 114 aa6.63□□□□□ -1.35
VBP1-202ENST00000460509 CD300LDQ6UXZ3 194 aa6.63□□□□□ -1.35
VBP1-202ENST00000460509 ETV3LQ6ZN32 361 aa6.63□□□□□ -1.35
VBP1-202ENST00000460509 AMIGO3Q86WK7 504 aa6.63□□□□□ -1.35
VBP1-202ENST00000460509 ANKLE2Q86XL3 938 aa6.63□□□□□ -1.35
VBP1-202ENST00000460509 FBXO15Q8NCQ5 510 aaPredicted RBP6.63□□□□□ -1.35
VBP1-202ENST00000460509 ATL2Q8NHH9 583 aa6.63□□□□□ -1.35
VBP1-202ENST00000460509 CHTF18Q8WVB6 975 aa6.63□□□□□ -1.35
VBP1-202ENST00000460509 KCNN1Q92952 543 aa6.63□□□□□ -1.35
VBP1-202ENST00000460509 BOCQ9BWV1 1114 aa6.63□□□□□ -1.35
VBP1-202ENST00000460509 PRAMEF25A6NGN4 478 aa6.62□□□□□ -1.35
VBP1-202ENST00000460509 H7C1D1 291 aa6.62□□□□□ -1.35
VBP1-202ENST00000460509 ASGR2P07307 311 aa6.62□□□□□ -1.35
VBP1-202ENST00000460509 CPEP16870 476 aa6.62□□□□□ -1.35
VBP1-202ENST00000460509 PTPN1P18031 435 aaKnown RBP6.62□□□□□ -1.35
VBP1-202ENST00000460509 ZNF174Q15697 407 aa6.62□□□□□ -1.35
VBP1-202ENST00000460509 FSTL4Q6MZW2 842 aa6.62□□□□□ -1.35
VBP1-202ENST00000460509 HHIPL2Q6UWX4 724 aa6.62□□□□□ -1.35
VBP1-202ENST00000460509 LDHDQ86WU2 507 aa6.62□□□□□ -1.35
VBP1-202ENST00000460509 KIF18BQ86Y91 864 aa6.62□□□□□ -1.35
VBP1-202ENST00000460509 TOE1Q96GM8 510 aaKnown RBP6.62□□□□□ -1.35
VBP1-202ENST00000460509 GPATCH3Q96I76 525 aa6.62□□□□□ -1.35
VBP1-202ENST00000460509 FAM126AQ9BYI3 521 aaPredicted RBP6.62□□□□□ -1.35
VBP1-202ENST00000460509 PCIF1Q9H4Z3 704 aa6.62□□□□□ -1.35
VBP1-202ENST00000460509 CNTD2Q9H8S5 307 aa6.62□□□□□ -1.35
VBP1-202ENST00000460509 PCDH12Q9NPG4 1184 aa6.62□□□□□ -1.35
VBP1-202ENST00000460509 FAN1Q9Y2M0 1017 aa6.62□□□□□ -1.35
VBP1-202ENST00000460509 hCG_2014768A0A024R1R8 64 aa6.61□□□□□ -1.35
VBP1-202ENST00000460509 FAM90A27PA6NNH2 459 aa6.61□□□□□ -1.35
VBP1-202ENST00000460509 HRKO00198 91 aa6.61□□□□□ -1.35
VBP1-202ENST00000460509 PEX10O60683 326 aa6.61□□□□□ -1.35
VBP1-202ENST00000460509 CLASP2O75122 1294 aaKnown RBP6.61□□□□□ -1.35
VBP1-202ENST00000460509 NCAM1P13591 858 aa6.61□□□□□ -1.35
VBP1-202ENST00000460509 ATP2A2P16615 1042 aaKnown RBP6.61□□□□□ -1.35
VBP1-202ENST00000460509 MC3RP41968 323 aa6.61□□□□□ -1.35
VBP1-202ENST00000460509 KPNA1P52294 538 aaPredicted RBP6.61□□□□□ -1.35
VBP1-202ENST00000460509 KIF11P52732 1056 aa6.61□□□□□ -1.35
VBP1-202ENST00000460509 PAN2Q504Q3 1202 aaKnown RBP6.61□□□□□ -1.35
VBP1-202ENST00000460509 FAM126BQ8IXS8 530 aa6.61□□□□□ -1.35
VBP1-202ENST00000460509 FAM26EQ8N5C1 309 aa6.61□□□□□ -1.35
VBP1-202ENST00000460509 TTC1Q99614 292 aa6.61□□□□□ -1.35
VBP1-202ENST00000460509 DTLQ9NZJ0 730 aa6.61□□□□□ -1.35
VBP1-202ENST00000460509 H2AFY2Q9P0M6 372 aaPredicted RBP6.61□□□□□ -1.35
VBP1-202ENST00000460509 MBD1Q9UIS9 605 aaPredicted RBP6.61□□□□□ -1.35
VBP1-202ENST00000460509 TEX51A0A1B0GUA7 166 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 BUB1BO60566 1050 aaPredicted RBP6.6□□□□□ -1.35
VBP1-202ENST00000460509 ZBTB48P10074 688 aaPredicted RBP6.6□□□□□ -1.35
VBP1-202ENST00000460509 PFKLP17858 780 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 SLC9A1P19634 815 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 GJA4P35212 333 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 CDR1P51861 262 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 EPHA5P54756 1037 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 ANAPC15P60006 121 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 NKX3-2P78367 333 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 AMPD3Q01432 767 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 DSG1Q02413 1049 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 DHCR24Q15392 516 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 TARBP2Q15633 366 aaKnown RBP6.6□□□□□ -1.35
VBP1-202ENST00000460509 SYDE1Q6ZW31 735 aaPredicted RBP6.6□□□□□ -1.35
VBP1-202ENST00000460509 OTOP1Q7RTM1 612 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 C11orf74Q86VG3 221 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 ZC3H18Q86VM9 953 aaKnown RBP6.6□□□□□ -1.35
VBP1-202ENST00000460509 NOSTRINQ8IVI9 506 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 MZB1Q8WU39 189 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 ORAI3Q9BRQ5 295 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 KCNH7Q9NS40 1196 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 OXSMQ9NWU1 459 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 MCM8Q9UJA3 840 aa6.6□□□□□ -1.35
VBP1-202ENST00000460509 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.59□□□□□ -1.35
VBP1-202ENST00000460509 FKBP9O95302 570 aa6.59□□□□□ -1.35
VBP1-202ENST00000460509 FAHP16930 419 aa6.59□□□□□ -1.35
VBP1-202ENST00000460509 ID4P47928 161 aa6.59□□□□□ -1.35
VBP1-202ENST00000460509 EPHB3P54753 998 aa6.59□□□□□ -1.35
VBP1-202ENST00000460509 IGBP1P78318 339 aa6.59□□□□□ -1.35
VBP1-202ENST00000460509 SEC23AQ15436 765 aa6.59□□□□□ -1.35
VBP1-202ENST00000460509 FKBP9P1Q75LS8 142 aa6.59□□□□□ -1.35
VBP1-202ENST00000460509 STK32CQ86UX6 486 aa6.59□□□□□ -1.35
VBP1-202ENST00000460509 DDX42Q86XP3 938 aaKnown RBP eCLIP6.59□□□□□ -1.35
VBP1-202ENST00000460509 AFAP1L2Q8N4X5 818 aa6.59□□□□□ -1.35
VBP1-202ENST00000460509 KIAA1958Q8N8K9 716 aa6.59□□□□□ -1.35
VBP1-202ENST00000460509 SMC1BQ8NDV3 1235 aa6.59□□□□□ -1.35
VBP1-202ENST00000460509 ERCC4Q92889 916 aaPredicted RBP6.59□□□□□ -1.35
VBP1-202ENST00000460509 IFT22Q9H7X7 185 aa6.59□□□□□ -1.35
VBP1-202ENST00000460509 TOMM22Q9NS69 142 aa6.59□□□□□ -1.35
VBP1-202ENST00000460509 SPTLC3Q9NUV7 552 aa6.59□□□□□ -1.35
VBP1-202ENST00000460509 ATP8A1Q9Y2Q0 1164 aa6.59□□□□□ -1.35
VBP1-202ENST00000460509 ACOT7O00154 380 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 NEMP1O14524 444 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 SEMA7AO75326 666 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 LRG1P02750 347 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 TMEM253P0C7T8 217 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 ATF2P15336 505 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 ADCYAP1R1P41586 468 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 EVA1CP58658 441 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 TMPRSS15P98073 1019 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 OCRLQ01968 901 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 CACNB2Q08289 660 aaPredicted RBP6.58□□□□□ -1.36
VBP1-202ENST00000460509 TEPPQ6URK8 271 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 TMC5Q6UXY8 1006 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms