RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 CNGA4Q8IV77 575 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 FAM178BQ8IXR5 827 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 ZNF397Q8NF99 534 aaPredicted RBP10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 LPAR1Q92633 364 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 LXNQ9BS40 222 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 RUSC1Q9BVN2 902 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 TTC26A0AVF1 554 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 PHF20L1A8MW92 1017 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 FZD9O00144 591 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 CETN3O15182 167 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 ZBTB22O15209 634 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 AKR1B10O60218 316 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 CCDC175P0C221 793 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 COG2Q14746 738 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 RRAGAQ7L523 313 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 CLMNQ96JQ2 1002 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 CHP1Q99653 195 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 PCIF1Q9H4Z3 704 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 MAGEF1Q9HAY2 307 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 RNF216Q9NWF9 866 aaPredicted RBP10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 PPP1R9AQ9ULJ8 1098 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 DDX60LQ5H9U9 1706 aaKnown RBP10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 MYBP10242 640 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 CYP27A1Q02318 531 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 KCNA1Q09470 495 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 ZNF569Q5MCW4 686 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 TTI2Q6NXR4 508 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 BTNL9Q6UXG8 535 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 ELOA2Q8IYF1 753 aaPredicted RBP10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 KIAA1683Q9H0B3 1180 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 AGPAT5Q9NUQ2 364 aa10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 SEPT11Q9NVA2 429 aaKnown RBP10.35□□□□□ -0.75
NUDCD3-203ENST00000460110 KIF20AO95235 890 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 NPEPPSP55786 919 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 ZNF280AP59817 542 aaPredicted RBP10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 FAM102BQ5T8I3 360 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 ANKRD13CQ8N6S4 541 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 MB21D1Q8N884 522 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 SYTL5Q8TDW5 730 aaPredicted RBP10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 VPS33BQ9H267 617 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 UNC45AQ9H3U1 944 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 KCNMB3Q9NPA1 279 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 PCNTO95613 3336 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 A0A0U1RQJ8 604 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 TBC1D12O60347 775 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 GYPCP04921 128 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 MYL1P05976 194 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 ITGB5P18084 799 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 CASQ1P31415 396 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 USP8P40818 1118 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 MATR3P43243 847 aaKnown RBP eCLIP10.34□□□□□ -0.755e-6■■■□□ 17.3
NUDCD3-203ENST00000460110 APBA1Q02410 837 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 RAPGEF1Q13905 1077 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 CDKAL1Q5VV42 579 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 GPC2Q8N158 579 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 ATRIPQ8WXE1 791 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 DUSP9Q99956 384 aaKnown RBP10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 RANBP17Q9H2T7 1088 aaKnown RBP10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 SMCHD1A6NHR9 2005 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 COL4A5P29400 1685 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 KIAA1551Q9HCM1 1747 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 MACROD2A1Z1Q3 448 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 RNF225M0QZC1 329 aaPredicted RBP10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 VWA5AO00534 786 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 RPA1P27694 616 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 DNM2P50570 870 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 CASP5P51878 434 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 FKBP3Q00688 224 aaKnown RBP10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 PLA2G4FQ68DD2 849 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 HS2ST1Q7LGA3 356 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 ETNPPLQ8TBG4 499 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 NDST4Q9H3R1 872 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 SPTLC3Q9NUV7 552 aa10.34□□□□□ -0.75
NUDCD3-203ENST00000460110 PVALEFA0A1B0GWK0 134 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 CCP110O43303 1012 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 KIF5CO60282 957 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 HARSP12081 509 aaKnown RBP10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 VGLL4Q14135 290 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 MAP1SQ66K74 1059 aaPredicted RBP10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 IRF2BP1Q8IU81 584 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 MTMR14Q8NCE2 650 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 NEK11Q8NG66 645 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 OR8K1Q8NGG5 319 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 BBXQ8WY36 941 aaPredicted RBP10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 ZNF668Q96K58 619 aaPredicted RBP10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 CCDC42Q96M95 316 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 SPAG5Q96R06 1193 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 MXRA8Q9BRK3 442 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 ATP9AO75110 1047 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 MFAP3LO75121 409 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 NR3C2P08235 984 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 EEF1GP26641 437 aaKnown RBP10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 PTPROQ16827 1216 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 MCTP2Q6DN12 878 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 GPRC5CQ9NQ84 441 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 COL4A3BPQ9Y5P4 624 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 CASZ1Q86V15 1759 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 LGALS16A8MUM7 142 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 K7ENM7 598 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms