RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 PARNO95453 639 aaKnown RBP18.82■□□□□ 0.6
SHANK2-213ENST00000460048 CYP3A4P08684 503 aa18.82■□□□□ 0.6
SHANK2-213ENST00000460048 ARP10275 920 aa18.82■□□□□ 0.6
SHANK2-213ENST00000460048 GNA11P29992 359 aa18.82■□□□□ 0.6
SHANK2-213ENST00000460048 PBX2P40425 430 aa18.82■□□□□ 0.6
SHANK2-213ENST00000460048 NIPA1Q7RTP0 329 aa18.82■□□□□ 0.6
SHANK2-213ENST00000460048 ZNF215Q9UL58 517 aaPredicted RBP18.82■□□□□ 0.6
SHANK2-213ENST00000460048 TREHO43280 583 aa18.81■□□□□ 0.6
SHANK2-213ENST00000460048 ADAM17P78536 824 aa18.81■□□□□ 0.6
SHANK2-213ENST00000460048 REXO1Q8N1G1 1221 aaKnown RBP18.81■□□□□ 0.6
SHANK2-213ENST00000460048 CCDC148Q8NFR7 591 aa18.81■□□□□ 0.6
SHANK2-213ENST00000460048 ATP6V0A1Q93050 837 aa18.81■□□□□ 0.6
SHANK2-213ENST00000460048 AGO4Q9HCK5 861 aaKnown RBP18.81■□□□□ 0.6
SHANK2-213ENST00000460048 JPH1Q9HDC5 661 aaPredicted RBP18.81■□□□□ 0.6
SHANK2-213ENST00000460048 SH3GLB2Q9NR46 395 aa18.81■□□□□ 0.6
SHANK2-213ENST00000460048 VPS54Q9P1Q0 977 aa18.81■□□□□ 0.6
SHANK2-213ENST00000460048 SLC4A7Q9Y6M7 1214 aa18.81■□□□□ 0.6
SHANK2-213ENST00000460048 SIP14410 1827 aa18.81■□□□□ 0.6
SHANK2-213ENST00000460048 MYH9P35579 1960 aaKnown RBP18.81■□□□□ 0.6
SHANK2-213ENST00000460048 MICAL3Q7RTP6 2002 aa18.8■□□□□ 0.6
SHANK2-213ENST00000460048 IGLV3-22A0A075B6J6 115 aa18.8■□□□□ 0.6
SHANK2-213ENST00000460048 FAM86B1E9PN63 330 aa18.8■□□□□ 0.6
SHANK2-213ENST00000460048 NBNO60934 754 aa18.8■□□□□ 0.6
SHANK2-213ENST00000460048 CXCL10P02778 98 aa18.8■□□□□ 0.6
SHANK2-213ENST00000460048 FAM86B2P0C5J1 330 aa18.8■□□□□ 0.6
SHANK2-213ENST00000460048 ACTN1P12814 892 aa18.8■□□□□ 0.6
SHANK2-213ENST00000460048 SSRP1Q08945 709 aaKnown RBP18.8■□□□□ 0.6
SHANK2-213ENST00000460048 STK3Q13188 491 aa18.8■□□□□ 0.6
SHANK2-213ENST00000460048 ZNF618Q5T7W0 954 aa18.8■□□□□ 0.6
SHANK2-213ENST00000460048 TRIM22Q8IYM9 498 aa18.8■□□□□ 0.6
SHANK2-213ENST00000460048 TIFAQ96CG3 184 aa18.8■□□□□ 0.6
SHANK2-213ENST00000460048 CDX2Q99626 313 aaPredicted RBP18.8■□□□□ 0.6
SHANK2-213ENST00000460048 FTOQ9C0B1 505 aaKnown RBP eCLIP18.8■□□□□ 0.6
SHANK2-213ENST00000460048 SETD4Q9NVD3 440 aa18.8■□□□□ 0.6
SHANK2-213ENST00000460048 SLC9A2Q9UBY0 812 aa18.8■□□□□ 0.6
SHANK2-213ENST00000460048 CDH23Q9H251 3354 aa18.8■□□□□ 0.6
SHANK2-213ENST00000460048 EMSYQ7Z589 1322 aa18.79■□□□□ 0.6
SHANK2-213ENST00000460048 ZBBXA8MT70 800 aa18.79■□□□□ 0.6
SHANK2-213ENST00000460048 CPLX1O14810 134 aa18.79■□□□□ 0.6
SHANK2-213ENST00000460048 LGR5O75473 907 aa18.79■□□□□ 0.6
SHANK2-213ENST00000460048 GNAT1P11488 350 aa18.79■□□□□ 0.6
SHANK2-213ENST00000460048 ITGB3BPQ13352 177 aaPredicted RBP18.79■□□□□ 0.6
SHANK2-213ENST00000460048 MBTPS1Q14703 1052 aa18.79■□□□□ 0.6
SHANK2-213ENST00000460048 RAB30Q15771 203 aa18.79■□□□□ 0.6
SHANK2-213ENST00000460048 BICD2Q8TD16 824 aa18.79■□□□□ 0.6
SHANK2-213ENST00000460048 RASGRP4Q8TDF6 673 aa18.79■□□□□ 0.6
SHANK2-213ENST00000460048 PCYT2Q99447 389 aa18.79■□□□□ 0.6
SHANK2-213ENST00000460048 SDF4Q9BRK5 362 aa18.79■□□□□ 0.6
SHANK2-213ENST00000460048 NRCAMQ92823 1304 aa18.78■□□□□ 0.6
SHANK2-213ENST00000460048 MYO9BQ13459 2157 aa18.78■□□□□ 0.6
SHANK2-213ENST00000460048 EIF5BO60841 1220 aaKnown RBP18.78■□□□□ 0.6
SHANK2-213ENST00000460048 BAIAP3O94812 1187 aa18.78■□□□□ 0.6
SHANK2-213ENST00000460048 ATG7O95352 703 aa18.78■□□□□ 0.6
SHANK2-213ENST00000460048 DEXIO95424 95 aa18.78■□□□□ 0.6
SHANK2-213ENST00000460048 SEC24BO95487 1268 aa18.78■□□□□ 0.6
SHANK2-213ENST00000460048 ZNF76P36508 570 aa18.78■□□□□ 0.6
SHANK2-213ENST00000460048 SCRN1Q12765 414 aa18.78■□□□□ 0.6
SHANK2-213ENST00000460048 PLA2G4DQ86XP0 818 aa18.78■□□□□ 0.6
SHANK2-213ENST00000460048 LMBR1Q8WVP7 490 aa18.78■□□□□ 0.6
SHANK2-213ENST00000460048 SMARCAD1Q9H4L7 1026 aa18.78■□□□□ 0.6
SHANK2-213ENST00000460048 ZNF576Q9H609 170 aa18.78■□□□□ 0.6
SHANK2-213ENST00000460048 ERAP1Q9NZ08 941 aa18.78■□□□□ 0.6
SHANK2-213ENST00000460048 TPCN1Q9ULQ1 816 aa18.78■□□□□ 0.6
SHANK2-213ENST00000460048 YBX2Q9Y2T7 364 aaKnown RBP18.78■□□□□ 0.6
SHANK2-213ENST00000460048 LOXHD1Q8IVV2 1947 aa18.77■□□□□ 0.6
SHANK2-213ENST00000460048 EDIL3O43854 480 aa18.77■□□□□ 0.6
SHANK2-213ENST00000460048 ATP2A2P16615 1042 aaKnown RBP18.77■□□□□ 0.6
SHANK2-213ENST00000460048 CIITAP33076 1130 aa18.77■□□□□ 0.6
SHANK2-213ENST00000460048 THPOP40225 353 aa18.77■□□□□ 0.6
SHANK2-213ENST00000460048 ACTR2P61160 394 aa18.77■□□□□ 0.6
SHANK2-213ENST00000460048 TCTN1Q2MV58 587 aa18.77■□□□□ 0.6
SHANK2-213ENST00000460048 CNKSR3Q6P9H4 555 aa18.77■□□□□ 0.6
SHANK2-213ENST00000460048 CPLX2Q6PUV4 134 aaKnown RBP18.77■□□□□ 0.6
SHANK2-213ENST00000460048 SLC9A7Q96T83 725 aa18.77■□□□□ 0.6
SHANK2-213ENST00000460048 MSRAQ9UJ68 235 aa18.77■□□□□ 0.6
SHANK2-213ENST00000460048 DHX15O43143 795 aaKnown RBP18.76■□□□□ 0.59
SHANK2-213ENST00000460048 PFKFB2O60825 505 aa18.76■□□□□ 0.59
SHANK2-213ENST00000460048 CAND2O75155 1236 aa18.76■□□□□ 0.59
SHANK2-213ENST00000460048 MARK3P27448 753 aa18.76■□□□□ 0.59
SHANK2-213ENST00000460048 RABGGTBP53611 331 aa18.76■□□□□ 0.59
SHANK2-213ENST00000460048 AK2P54819 239 aa18.76■□□□□ 0.59
SHANK2-213ENST00000460048 NLRP5P59047 1200 aa18.76■□□□□ 0.59
SHANK2-213ENST00000460048 GRIN2CQ14957 1233 aa18.76■□□□□ 0.59
SHANK2-213ENST00000460048 FAM177A1Q8N128 213 aaPredicted RBP18.76■□□□□ 0.59
SHANK2-213ENST00000460048 PHOSPHO2Q8TCD6 241 aa18.76■□□□□ 0.59
SHANK2-213ENST00000460048 MYLIPQ8WY64 445 aa18.76■□□□□ 0.59
SHANK2-213ENST00000460048 GLG1Q92896 1179 aa18.76■□□□□ 0.59
SHANK2-213ENST00000460048 SLKQ9H2G2 1235 aaPredicted RBP18.76■□□□□ 0.59
SHANK2-213ENST00000460048 NKX2-4Q9H2Z4 354 aa18.76■□□□□ 0.59
SHANK2-213ENST00000460048 PCDHA11Q9Y5I1 949 aa18.76■□□□□ 0.59
SHANK2-213ENST00000460048 IGKV6D-21A0A0A0MT36 114 aa18.75■□□□□ 0.59
SHANK2-213ENST00000460048 RSPH10B2B2RC85 870 aa18.75■□□□□ 0.59
SHANK2-213ENST00000460048 M0R2N6 131 aa18.75■□□□□ 0.59
SHANK2-213ENST00000460048 CCNE2O96020 404 aa18.75■□□□□ 0.59
SHANK2-213ENST00000460048 RSPH10BP0C881 870 aa18.75■□□□□ 0.59
SHANK2-213ENST00000460048 SETQ01105 290 aaPredicted RBP18.75■□□□□ 0.59
SHANK2-213ENST00000460048 PPFIA1Q13136 1202 aa18.75■□□□□ 0.59
SHANK2-213ENST00000460048 ANKRD1Q15327 319 aa18.75■□□□□ 0.59
SHANK2-213ENST00000460048 NPY5RQ15761 445 aa18.75■□□□□ 0.59
SHANK2-213ENST00000460048 PLPPR4Q7Z2D5 763 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms