RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 DLX2Q07687 328 aaPredicted RBP9.15□□□□□ -0.94
HPS4-207ENST00000459918 TRAF1Q13077 416 aa9.15□□□□□ -0.94
HPS4-207ENST00000459918 HERC4Q5GLZ8 1057 aaPredicted RBP9.15□□□□□ -0.94
HPS4-207ENST00000459918 IFIT1BQ5T764 474 aaKnown RBP9.15□□□□□ -0.94
HPS4-207ENST00000459918 RSPH3Q86UC2 560 aa9.15□□□□□ -0.94
HPS4-207ENST00000459918 ZNF589Q86UQ0 364 aaPredicted RBP9.15□□□□□ -0.94
HPS4-207ENST00000459918 SLC39A7Q92504 469 aa9.15□□□□□ -0.94
HPS4-207ENST00000459918 EDAQ92838 391 aa9.15□□□□□ -0.94
HPS4-207ENST00000459918 ZSCAN10Q96SZ4 725 aaPredicted RBP9.15□□□□□ -0.94
HPS4-207ENST00000459918 PHOX2BQ99453 314 aa9.15□□□□□ -0.94
HPS4-207ENST00000459918 C16orf70Q9BSU1 422 aa9.15□□□□□ -0.94
HPS4-207ENST00000459918 USP26Q9BXU7 913 aa9.15□□□□□ -0.94
HPS4-207ENST00000459918 RNPEPQ9H4A4 650 aa9.15□□□□□ -0.94
HPS4-207ENST00000459918 JMJD4Q9H9V9 463 aa9.15□□□□□ -0.94
HPS4-207ENST00000459918 ALG13Q9NP73 1137 aaKnown RBP9.15□□□□□ -0.94
HPS4-207ENST00000459918 PCDHA1Q9Y5I3 950 aa9.15□□□□□ -0.94
HPS4-207ENST00000459918 USP34Q70CQ2 3546 aa9.14□□□□□ -0.95
HPS4-207ENST00000459918 GCOM1H8Y6P7 765 aaPredicted RBP9.14□□□□□ -0.95
HPS4-207ENST00000459918 LINC01565O15544 149 aa9.14□□□□□ -0.95
HPS4-207ENST00000459918 MMP1P03956 469 aa9.14□□□□□ -0.95
HPS4-207ENST00000459918 POLR2MP0CAP2 368 aa9.14□□□□□ -0.95
HPS4-207ENST00000459918 TGFB3P10600 412 aa9.14□□□□□ -0.95
HPS4-207ENST00000459918 C7P10643 843 aa9.14□□□□□ -0.95
HPS4-207ENST00000459918 GTF2F1P35269 517 aaKnown RBP eCLIP9.14□□□□□ -0.95
HPS4-207ENST00000459918 LTBRP36941 435 aa9.14□□□□□ -0.95
HPS4-207ENST00000459918 HSD17B4P51659 736 aa9.14□□□□□ -0.95
HPS4-207ENST00000459918 NEDD9Q14511 834 aa9.14□□□□□ -0.95
HPS4-207ENST00000459918 PKN1Q16512 942 aa9.14□□□□□ -0.95
HPS4-207ENST00000459918 SPOUT1Q5T280 376 aaKnown RBP9.14□□□□□ -0.95
HPS4-207ENST00000459918 TRIM67Q6ZTA4 783 aa9.14□□□□□ -0.95
HPS4-207ENST00000459918 CYFIP1Q7L576 1253 aa9.14□□□□□ -0.95
HPS4-207ENST00000459918 TRIM50Q86XT4 487 aa9.14□□□□□ -0.95
HPS4-207ENST00000459918 PRSS33Q8NF86 280 aa9.14□□□□□ -0.95
HPS4-207ENST00000459918 MICAL1Q8TDZ2 1067 aa9.14□□□□□ -0.95
HPS4-207ENST00000459918 FAM86C1Q9NVL1 165 aa9.14□□□□□ -0.95
HPS4-207ENST00000459918 MAP3K20Q9NYL2 800 aaKnown RBP9.14□□□□□ -0.95
HPS4-207ENST00000459918 PLXNA4Q9HCM2 1894 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 KLRF2D3W0D1 207 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 C5orf67F2Z3F1 127 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 M0QZ92 97 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 ZBTB5O15062 677 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 MAP3K13O43283 966 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 GFRA3O60609 400 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 RGS20O76081 388 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 HOXD8P13378 290 aaPredicted RBP9.13□□□□□ -0.95
HPS4-207ENST00000459918 NRIP1P48552 1158 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 SP2Q02086 613 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 IMMTQ16891 758 aaKnown RBP9.13□□□□□ -0.95
HPS4-207ENST00000459918 PAN2Q504Q3 1202 aaKnown RBP9.13□□□□□ -0.95
HPS4-207ENST00000459918 METTL7BQ6UX53 244 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 RBM23Q86U06 439 aaKnown RBP9.13□□□□□ -0.95
HPS4-207ENST00000459918 VSIG10LQ86VR7 867 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 ENAHQ8N8S7 591 aaPredicted RBP9.13□□□□□ -0.95
HPS4-207ENST00000459918 IL31RAQ8NI17 732 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 LMBR1Q8WVP7 490 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 ATOH1Q92858 354 aaPredicted RBP9.13□□□□□ -0.95
HPS4-207ENST00000459918 GPKOWQ92917 476 aaPredicted RBP eCLIP9.13□□□□□ -0.95
HPS4-207ENST00000459918 RPGRIP1Q96KN7 1286 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 KRT23Q9C075 422 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 DIAPH3Q9NSV4 1193 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 RTEL1Q9NZ71 1219 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 LRFN2Q9ULH4 789 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 LOXHD1Q8IVV2 1947 aa9.13□□□□□ -0.95
HPS4-207ENST00000459918 MYO7AQ13402 2215 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 NRCAMQ92823 1304 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 FIBPO43427 364 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 PPFIA3O75145 1194 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 SRGAP2BP0DMP2 458 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 MARK3P27448 753 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 NT5C2P49902 561 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 PDE1AP54750 535 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 IGBP1P78318 339 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 PPFIA1Q13136 1202 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 COL19A1Q14993 1142 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 CTC1Q2NKJ3 1217 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 IER5LQ5T953 404 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 TAF2Q6P1X5 1199 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 CWC27Q6UX04 472 aaKnown RBP9.12□□□□□ -0.95
HPS4-207ENST00000459918 STOX1Q6ZVD7 989 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 STAG2Q8N3U4 1231 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 FBXL6Q8N531 539 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 SMARCC2Q8TAQ2 1214 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 PIBF1Q8WXW3 757 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 PLVAPQ9BX97 442 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 OSBPL7Q9BZF2 842 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 CNNM2Q9H8M5 875 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 BMP2KQ9NSY1 1161 aaPredicted RBP9.12□□□□□ -0.95
HPS4-207ENST00000459918 TUBE1Q9UJT0 475 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 BARX2Q9UMQ3 279 aaPredicted RBP9.12□□□□□ -0.95
HPS4-207ENST00000459918 PCDHB15Q9Y5E8 787 aa9.12□□□□□ -0.95
HPS4-207ENST00000459918 ERICH2A1L162 156 aa9.11□□□□□ -0.95
HPS4-207ENST00000459918 OPLAHO14841 1288 aa9.11□□□□□ -0.95
HPS4-207ENST00000459918 STAM2O75886 525 aa9.11□□□□□ -0.95
HPS4-207ENST00000459918 STAG3L1P0CL83 205 aa9.11□□□□□ -0.95
HPS4-207ENST00000459918 SP100P23497 879 aaPredicted RBP9.11□□□□□ -0.95
HPS4-207ENST00000459918 RRP1P56182 461 aaKnown RBP9.11□□□□□ -0.95
HPS4-207ENST00000459918 ZXDAP98168 799 aa9.11□□□□□ -0.95
HPS4-207ENST00000459918 TRDNQ13061 729 aa9.11□□□□□ -0.95
HPS4-207ENST00000459918 ADGRD2Q7Z7M1 963 aa9.11□□□□□ -0.95
HPS4-207ENST00000459918 PLCD3Q8N3E9 789 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms