RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 QTRT2Q9H974 415 aaKnown RBP9.74□□□□□ -0.85
HDAC3-202ENST00000459727 ST7Q9NRC1 585 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 EMILIN3Q9NT22 766 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 LRRC4BQ9NT99 713 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 VPS18Q9P253 973 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 TRIM10Q9UDY6 481 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 ARMCX3Q9UH62 379 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-202ENST00000459727 INTUQ9ULD6 942 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 KIAA1024Q9UPX6 916 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 ERICH4A6NGS2 130 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 USP17L10C9JJH3 530 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 PIK3CDO00329 1044 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 ENC1O14682 589 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 FLOT1O75955 427 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 SSBP05455 408 aaKnown RBP eCLIP9.73□□□□□ -0.85
HDAC3-202ENST00000459727 CYP3A4P08684 503 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 EPB41P11171 864 aaKnown RBP9.73□□□□□ -0.85
HDAC3-202ENST00000459727 XRCC5P13010 732 aaKnown RBP9.73□□□□□ -0.85
HDAC3-202ENST00000459727 RFX1P22670 979 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 LMAN1P49257 510 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 TNNC1P63316 161 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 KLHL30Q0D2K2 578 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 PAK2Q13177 524 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 NAB2Q15742 525 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 SLC15A2Q16348 729 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 ZSCAN26Q16670 478 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 UBE2SQ16763 222 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 KNOP1Q1ED39 458 aaKnown RBP9.73□□□□□ -0.85
HDAC3-202ENST00000459727 CC2D2BQ6DHV5 1058 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 STYK1Q6J9G0 422 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 APOBEC3HQ6NTF7 200 aaKnown RBP9.73□□□□□ -0.85
HDAC3-202ENST00000459727 C8orf74Q6P047 294 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 TATDN1Q6P1N9 297 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 BTNL9Q6UXG8 535 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 FBXO11Q86XK2 927 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 CREG2Q8IUH2 290 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 SYCE1Q8N0S2 351 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 SUPT20HQ8NEM7 779 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 SPATA4Q8NEY3 305 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 NEK9Q8TD19 979 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 CRYGNQ8WXF5 182 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 TAF4BQ92750 862 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 CAVIN3Q969G5 261 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 MKNK1Q9BUB5 465 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 LSM14BQ9BX40 385 aaKnown RBP9.73□□□□□ -0.85
HDAC3-202ENST00000459727 KCTD10Q9H3F6 313 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 TUFT1Q9NNX1 390 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 DDX4Q9NQI0 724 aaKnown RBP9.73□□□□□ -0.85
HDAC3-202ENST00000459727 OLFML3Q9NRN5 406 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 TYW1Q9NV66 732 aaKnown RBP9.73□□□□□ -0.85
HDAC3-202ENST00000459727 STIM2Q9P246 746 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 HPCAL4Q9UM19 191 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 PCDHGC5Q9Y5F6 944 aa9.73□□□□□ -0.85
HDAC3-202ENST00000459727 A0A0A6YYK5 440 aaPredicted RBP9.72□□□□□ -0.85
HDAC3-202ENST00000459727 GOLGA6BA6NDN3 693 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 H3BQF6 201 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 PPP1R11O60927 126 aaPredicted RBP9.72□□□□□ -0.85
HDAC3-202ENST00000459727 TRIM37O94972 964 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 ABL1P00519 1130 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 AFPP02771 609 aaKnown RBP9.72□□□□□ -0.85
HDAC3-202ENST00000459727 EEF2P13639 858 aaKnown RBP9.72□□□□□ -0.85
HDAC3-202ENST00000459727 CAPN2P17655 700 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 NR2F2P24468 414 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 PRKCIP41743 596 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 KLK7P49862 253 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 SLC12A3P55017 1021 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 EIF6P56537 245 aaKnown RBP9.72□□□□□ -0.85
HDAC3-202ENST00000459727 ATP2B2Q01814 1243 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 CYP27A1Q02318 531 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 ADAM9Q13443 819 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 ALCAMQ13740 583 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 PPP2R5EQ16537 467 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 SYDE2Q5VT97 1194 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 CCDC125Q86Z20 511 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 ETNPPLQ8TBG4 499 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 AENQ8WTP8 325 aaKnown RBP9.72□□□□□ -0.85
HDAC3-202ENST00000459727 PBKQ96KB5 322 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 CAPZA3Q96KX2 299 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 SPAG5Q96R06 1193 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 SELENOOQ9BVL4 669 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 ARHGEF10LQ9HCE6 1279 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 TMOD2Q9NZR1 351 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 HDAC6Q9UBN7 1215 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 HERC5Q9UII4 1024 aaKnown RBP9.72□□□□□ -0.85
HDAC3-202ENST00000459727 PCDHA2Q9Y5H9 948 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 CAPN6Q9Y6Q1 641 aa9.72□□□□□ -0.85
HDAC3-202ENST00000459727 POTEB3A0JP26 581 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 RCCD1A6NED2 376 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 POTECB2RU33 542 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 ZNF263O14978 683 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 RIMBP2O15034 1052 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 EDIL3O43854 480 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 HSF2BPO75031 334 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 RNF40O75150 1001 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 MOCS3O95396 460 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 EYA4O95677 639 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 FERP16591 822 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 NAP1L1P55209 391 aaKnown RBP9.71□□□□□ -0.86
HDAC3-202ENST00000459727 SETQ01105 290 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-202ENST00000459727 KCNMA1Q12791 1236 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms