RNA–Protein interactions for RNA: ENST00000456580.6

CAPN5-202, Transcript of calpain 5, humanhuman

TSL 2 BASIC

Gene CAPN5, Length 2,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-202ENST00000456580 RAD51CO43502 376 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 HOXD13P35453 343 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 CASP4P49662 377 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 CORO7P57737 925 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 PTK2Q05397 1052 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 ADAM9Q13443 819 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 ZBTB39O15060 712 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 CLIC2O15247 247 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 CYP11B2P19099 503 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 MCM3P25205 808 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 PAFAH1B1P43034 410 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 SLC9C1Q4G0N8 1177 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 COBLL1Q53SF7 1204 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 TRAPPC3LQ5T215 181 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 ZNF571Q7Z3V5 609 aaPredicted RBP16.7■□□□□ 0.26
CAPN5-202ENST00000456580 RBM46Q8TBY0 533 aaKnown RBP16.7■□□□□ 0.26
CAPN5-202ENST00000456580 NGLY1Q96IV0 654 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 KCTD10Q9H3F6 313 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 PSTPIP2Q9H939 334 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 MYH4Q9Y623 1939 aa16.7■□□□□ 0.26
CAPN5-202ENST00000456580 SHOX2O60902 331 aaPredicted RBP16.69■□□□□ 0.26
CAPN5-202ENST00000456580 MYBP10242 640 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 CLK2P49760 499 aaKnown RBP16.69■□□□□ 0.26
CAPN5-202ENST00000456580 GABPAQ06546 454 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 KLHL30Q0D2K2 578 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 KCNH2Q12809 1159 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 TRIM59Q8IWR1 403 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 KAT2BQ92831 832 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 RNPC3Q96LT9 517 aaKnown RBP16.69■□□□□ 0.26
CAPN5-202ENST00000456580 TSG101Q99816 390 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 SH3GL2Q99962 352 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 RIC8AQ9NPQ8 531 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 EMILIN3Q9NT22 766 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 ATP6V0A2Q9Y487 856 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 ESYT2A0FGR8 921 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 SHMT1P34896 483 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 FLT3P36888 993 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 SEC24CP53992 1094 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 ZNF572Q7Z3I7 529 aaPredicted RBP16.69■□□□□ 0.26
CAPN5-202ENST00000456580 NEUROG2Q9H2A3 272 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 CENPHQ9H3R5 247 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 CEP72Q9P209 647 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 ARFGEF1Q9Y6D6 1849 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 COL24A1Q17RW2 1714 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.69■□□□□ 0.26
CAPN5-202ENST00000456580 IL1R1P14778 569 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 EPHB4P54760 987 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 NNTQ13423 1086 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 USH1GQ495M9 461 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 DCAF17Q5H9S7 520 aaPredicted RBP16.69■□□□□ 0.26
CAPN5-202ENST00000456580 GANQ9H2C0 597 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 ZNF287Q9HBT7 754 aa16.69■□□□□ 0.26
CAPN5-202ENST00000456580 PNMA6FA0A0J9YX94 578 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 KCNK3O14649 394 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 SERPING1P05155 500 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 KRT18P05783 430 aaKnown RBP16.68■□□□□ 0.26
CAPN5-202ENST00000456580 ITGA4P13612 1032 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 COPB2P35606 906 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 PDIA5Q14554 519 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 NAB2Q15742 525 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 FAM107BQ9H098 131 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 SNHG28P0DPA3 235 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 PRLRP16471 622 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 NR2F2P24468 414 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 NOP2P46087 812 aaKnown RBP16.68■□□□□ 0.26
CAPN5-202ENST00000456580 NOVP48745 357 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 PRR16Q569H4 304 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 IQCEQ6IPM2 695 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 CCDC70Q6NSX1 233 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 DPY19L2P1Q6NXN4 242 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 MICALL1Q8N3F8 863 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 INPP4AQ96PE3 977 aaPredicted RBP16.68■□□□□ 0.26
CAPN5-202ENST00000456580 DNAJC18Q9H819 358 aa16.68■□□□□ 0.26
CAPN5-202ENST00000456580 TMCO5BA8MYB1 307 aa16.67■□□□□ 0.26
CAPN5-202ENST00000456580 SF3A3Q12874 501 aaKnown RBP eCLIP16.67■□□□□ 0.26
CAPN5-202ENST00000456580 SLC18A3Q16572 532 aa16.67■□□□□ 0.26
CAPN5-202ENST00000456580 QRICH1Q2TAL8 776 aa16.67■□□□□ 0.26
CAPN5-202ENST00000456580 CFAP221Q4G0U5 840 aa16.67■□□□□ 0.26
CAPN5-202ENST00000456580 RC3H1Q5TC82 1133 aaKnown RBP16.67■□□□□ 0.26
CAPN5-202ENST00000456580 MEI1Q5TIA1 1274 aa16.67■□□□□ 0.26
CAPN5-202ENST00000456580 SFR1Q86XK3 245 aa16.67■□□□□ 0.26
CAPN5-202ENST00000456580 CATSPER3Q86XQ3 398 aa16.67■□□□□ 0.26
CAPN5-202ENST00000456580 USP40Q9NVE5 1235 aa16.67■□□□□ 0.26
CAPN5-202ENST00000456580 IGKV6D-41A0A0C4DH26 115 aa16.67■□□□□ 0.26
CAPN5-202ENST00000456580 EIF3HO15372 352 aaKnown RBP eCLIP16.67■□□□□ 0.26
CAPN5-202ENST00000456580 HOXA13P31271 388 aaPredicted RBP16.67■□□□□ 0.26
CAPN5-202ENST00000456580 MAGEA9P43362 315 aa16.67■□□□□ 0.26
CAPN5-202ENST00000456580 ERVK-9P63128 1117 aa16.67■□□□□ 0.26
CAPN5-202ENST00000456580 PPFIA1Q13136 1202 aa16.67■□□□□ 0.26
CAPN5-202ENST00000456580 TCERG1LQ5VWI1 586 aa16.67■□□□□ 0.26
CAPN5-202ENST00000456580 FBXW10Q5XX13 1052 aa16.67■□□□□ 0.26
CAPN5-202ENST00000456580 ADAT2Q7Z6V5 191 aaKnown RBP16.67■□□□□ 0.26
CAPN5-202ENST00000456580 CUL5Q93034 780 aa16.67■□□□□ 0.26
CAPN5-202ENST00000456580 FAM169AQ9Y6X4 670 aa16.67■□□□□ 0.26
CAPN5-202ENST00000456580 GAKO14976 1311 aa16.66■□□□□ 0.26
CAPN5-202ENST00000456580 SSU72P8A0A1W2PR75 194 aa16.66■□□□□ 0.26
CAPN5-202ENST00000456580 RBAK-RBAKDNI3L0D1 243 aa16.66■□□□□ 0.26
CAPN5-202ENST00000456580 HSF2BPO75031 334 aa16.66■□□□□ 0.26
CAPN5-202ENST00000456580 TTLL1O95922 423 aa16.66■□□□□ 0.26
CAPN5-202ENST00000456580 SLC20A2Q08357 652 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms