RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 PRDM5Q9NQX1 630 aaPredicted RBP9.65□□□□□ -0.86
SP140-207ENST00000456542 TMEM39AQ9NV64 488 aa9.65□□□□□ -0.86
SP140-207ENST00000456542 PKD2L1Q9P0L9 805 aa9.65□□□□□ -0.86
SP140-207ENST00000456542 ZNF215Q9UL58 517 aaPredicted RBP9.65□□□□□ -0.86
SP140-207ENST00000456542 TANC1Q9C0D5 1861 aa9.65□□□□□ -0.86
SP140-207ENST00000456542 GSTTP1A0A1W2PQM5 241 aa9.64□□□□□ -0.87
SP140-207ENST00000456542 DHX15O43143 795 aaKnown RBP9.64□□□□□ -0.87
SP140-207ENST00000456542 B4GALT4O60513 344 aa9.64□□□□□ -0.87
SP140-207ENST00000456542 LGR5O75473 907 aa9.64□□□□□ -0.87
SP140-207ENST00000456542 ATG7O95352 703 aa9.64□□□□□ -0.87
SP140-207ENST00000456542 RAG1P15918 1043 aa9.64□□□□□ -0.87
SP140-207ENST00000456542 BMP8BP34820 402 aa9.64□□□□□ -0.87
SP140-207ENST00000456542 MAGEA10P43363 369 aaPredicted RBP9.64□□□□□ -0.87
SP140-207ENST00000456542 NR5A1Q13285 461 aa9.64□□□□□ -0.87
SP140-207ENST00000456542 SAFBQ15424 915 aaKnown RBP eCLIP9.64□□□□□ -0.87
SP140-207ENST00000456542 PPP4R3AQ6IN85 833 aa9.64□□□□□ -0.87
SP140-207ENST00000456542 PIK3AP1Q6ZUJ8 805 aa9.64□□□□□ -0.87
SP140-207ENST00000456542 C7orf31Q8N865 590 aa9.64□□□□□ -0.87
SP140-207ENST00000456542 FBXO18Q8NFZ0 1043 aa9.64□□□□□ -0.87
SP140-207ENST00000456542 RIT2Q99578 217 aa9.64□□□□□ -0.87
SP140-207ENST00000456542 ZNF577Q9BSK1 485 aa9.64□□□□□ -0.87
SP140-207ENST00000456542 PRO3102Q9H379 93 aa9.64□□□□□ -0.87
SP140-207ENST00000456542 GTF2IRD1Q9UHL9 959 aa9.64□□□□□ -0.87
SP140-207ENST00000456542 TRIOBPQ9H2D6 2365 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 A0A1W2PPC1 479 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 BTBD18B2RXH4 712 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 MSH4O15457 936 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 TDP2O95551 362 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 CCNE2O96020 404 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 TIMP1P01033 207 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 HOXC8P31273 242 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 ACTR2P61160 394 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 KRT76Q01546 638 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 LETM2Q2VYF4 491 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 ZNF746Q6NUN9 644 aaPredicted RBP9.63□□□□□ -0.87
SP140-207ENST00000456542 CHRDL2Q6WN34 429 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 TRIM50Q86XT4 487 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 SMAP1Q8IYB5 467 aaPredicted RBP9.63□□□□□ -0.87
SP140-207ENST00000456542 SLC5A5Q92911 643 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 LBHD1Q9BQE6 289 aaPredicted RBP9.63□□□□□ -0.87
SP140-207ENST00000456542 NOC4LQ9BVI4 516 aaKnown RBP9.63□□□□□ -0.87
SP140-207ENST00000456542 TRPV6Q9H1D0 765 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 FOXP1Q9H334 677 aaPredicted RBP9.63□□□□□ -0.87
SP140-207ENST00000456542 SMARCAD1Q9H4L7 1026 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 TRMT13Q9NUP7 481 aaKnown RBP9.63□□□□□ -0.87
SP140-207ENST00000456542 ERAP1Q9NZ08 941 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 HDAC6Q9UBN7 1215 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 DDX25Q9UHL0 483 aaKnown RBP9.63□□□□□ -0.87
SP140-207ENST00000456542 TCEAL9Q9UHQ7 104 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 TELO2Q9Y4R8 837 aa9.63□□□□□ -0.87
SP140-207ENST00000456542 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.63□□□□□ -0.87
SP140-207ENST00000456542 IGKV6D-21A0A0A0MT36 114 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 DDX39AO00148 427 aaKnown RBP9.62□□□□□ -0.87
SP140-207ENST00000456542 PITPNM1O00562 1244 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 TBX3O15119 743 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 PSMD10O75832 226 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 ITGB8P26012 769 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 SLC26A2P50443 739 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 FOSBP53539 338 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 CHMP4BP1P59074 171 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 MDM2Q00987 491 aaPredicted RBP9.62□□□□□ -0.87
SP140-207ENST00000456542 RBL2Q08999 1139 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 CUL4AQ13619 759 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 PTGISQ16647 500 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 EARS2Q5JPH6 523 aaKnown RBP9.62□□□□□ -0.87
SP140-207ENST00000456542 UTP14CQ5TAP6 766 aaKnown RBP9.62□□□□□ -0.87
SP140-207ENST00000456542 GDF6Q6KF10 455 aaPredicted RBP9.62□□□□□ -0.87
SP140-207ENST00000456542 MFSD5Q6N075 450 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 MIS18BP1Q6P0N0 1132 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 ABHD15Q6UXT9 468 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 PLPPR4Q7Z2D5 763 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 CCDC155Q8N6L0 562 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 ETNPPLQ8TBG4 499 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 CAGE1Q8TC20 777 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 AFAP1L1Q8TED9 768 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 GLG1Q92896 1179 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 BADQ92934 168 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 TNPO1Q92973 898 aaKnown RBP9.62□□□□□ -0.87
SP140-207ENST00000456542 CTAGE1Q96RT6 745 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 PCYT2Q99447 389 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 TEKT3Q9BXF9 490 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 HIPK3Q9H422 1215 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 AZI2Q9H6S1 392 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 KCNMB3Q9NPA1 279 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 COLQQ9Y215 455 aaPredicted RBP9.62□□□□□ -0.87
SP140-207ENST00000456542 NOD1Q9Y239 953 aa9.62□□□□□ -0.87
SP140-207ENST00000456542 NRCAMQ92823 1304 aa9.61□□□□□ -0.87
SP140-207ENST00000456542 C17orf102A2RUQ5 167 aa9.61□□□□□ -0.87
SP140-207ENST00000456542 FAM205CA6NFA0 338 aa9.61□□□□□ -0.87
SP140-207ENST00000456542 WDR64B1ANS9 1081 aa9.61□□□□□ -0.87
SP140-207ENST00000456542 SLC37A4O43826 429 aa9.61□□□□□ -0.87
SP140-207ENST00000456542 CCNT1O60563 726 aaKnown RBP9.61□□□□□ -0.87
SP140-207ENST00000456542 GAS7O60861 476 aa9.61□□□□□ -0.87
SP140-207ENST00000456542 SMIM10L2AP0DMW4 78 aa9.61□□□□□ -0.87
SP140-207ENST00000456542 SMIM10L2BP0DMW5 78 aa9.61□□□□□ -0.87
SP140-207ENST00000456542 GNAT1P11488 350 aa9.61□□□□□ -0.87
SP140-207ENST00000456542 CYP2C9P11712 490 aa9.61□□□□□ -0.87
SP140-207ENST00000456542 U2AF2P26368 475 aaKnown RBP eCLIP9.61□□□□□ -0.87
SP140-207ENST00000456542 GJB2P29033 226 aa9.61□□□□□ -0.87
SP140-207ENST00000456542 SFNP31947 248 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms