RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 THAP11Q96EK4 314 aa9.91□□□□□ -0.82
COL28A1-205ENST00000453441 SENP7Q9BQF6 1050 aa9.91□□□□□ -0.82
COL28A1-205ENST00000453441 KCNJ14Q9UNX9 436 aa9.91□□□□□ -0.82
COL28A1-205ENST00000453441 MYH7BA7E2Y1 1941 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 HOXA2O43364 376 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 SGPL1O95470 568 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 ZNF76P36508 570 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 TRAPPC10P48553 1259 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 MRPS9P82933 396 aaKnown RBP9.9□□□□□ -0.82
COL28A1-205ENST00000453441 GNL2Q13823 731 aaKnown RBP9.9□□□□□ -0.82
COL28A1-205ENST00000453441 NEDD9Q14511 834 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 MTFR1Q15390 333 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 LARP1BQ659C4 914 aaKnown RBP9.9□□□□□ -0.82
COL28A1-205ENST00000453441 CCDC62Q6P9F0 684 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 RNF180Q86T96 592 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 U2AF1L4Q8WU68 220 aaKnown RBP9.9□□□□□ -0.82
COL28A1-205ENST00000453441 EMID1Q96A84 441 aaPredicted RBP9.9□□□□□ -0.82
COL28A1-205ENST00000453441 DEFB118Q96PH6 123 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 MXRA8Q9BRK3 442 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 WDR11Q9BZH6 1224 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 SLC6A16Q9GZN6 736 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 AP5M1Q9H0R1 490 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 UPF3AQ9H1J1 476 aaKnown RBP9.9□□□□□ -0.82
COL28A1-205ENST00000453441 JADE2Q9NQC1 790 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 TMEM260Q9NX78 707 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 OGDHLQ9ULD0 1010 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 UBIAD1Q9Y5Z9 338 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 MRVI1Q9Y6F6 885 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 FRMPD3Q5JV73 1810 aa9.9□□□□□ -0.82
COL28A1-205ENST00000453441 CYP3A7-CYP3A51PA0A087WV96 503 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 SPATA31C2B4DYI2 1134 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 MEIS1O00470 390 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 ZEB2O60315 1214 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 KPNA6O60684 536 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 GH1P01241 217 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 TXNP10599 105 aaKnown RBP9.89□□□□□ -0.83
COL28A1-205ENST00000453441 CYP3A7P24462 503 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 CST5P28325 142 aaPredicted RBP9.89□□□□□ -0.83
COL28A1-205ENST00000453441 ADCYAP1R1P41586 468 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 CPT1AP50416 773 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 GJA9P57773 515 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 MTMR1Q13613 665 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 LAMC2Q13753 1193 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 PRAMEF19Q5SWL8 479 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 PPP4R3AQ6IN85 833 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 BRICD5Q6PL45 260 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 SEPT14Q6ZU15 432 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 EEPD1Q7L9B9 569 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 NEK8Q86SG6 692 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 PCSK9Q8NBP7 692 aaKnown RBP9.89□□□□□ -0.83
COL28A1-205ENST00000453441 IL31RAQ8NI17 732 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 RASGRP4Q8TDF6 673 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 TBCKQ8TEA7 893 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 TNFRSF25Q93038 417 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 TSEN34Q9BSV6 310 aaKnown RBP9.89□□□□□ -0.83
COL28A1-205ENST00000453441 SEZ6LQ9BYH1 1024 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 XPNPEP3Q9NQH7 507 aa9.89□□□□□ -0.83
COL28A1-205ENST00000453441 DDX41Q9UJV9 622 aaKnown RBP9.89□□□□□ -0.83
COL28A1-205ENST00000453441 NOL7Q9UMY1 257 aaKnown RBP9.89□□□□□ -0.83
COL28A1-205ENST00000453441 GNEQ9Y223 722 aaKnown RBP9.89□□□□□ -0.83
COL28A1-205ENST00000453441 MOXD2PA6NHM9 499 aa9.88□□□□□ -0.83
COL28A1-205ENST00000453441 BTBD18B2RXH4 712 aa9.88□□□□□ -0.83
COL28A1-205ENST00000453441 DNM1LO00429 736 aa9.88□□□□□ -0.83
COL28A1-205ENST00000453441 SMPD1P17405 629 aa9.88□□□□□ -0.83
COL28A1-205ENST00000453441 ITGB5P18084 799 aa9.88□□□□□ -0.83
COL28A1-205ENST00000453441 U2AF2P26368 475 aaKnown RBP eCLIP9.88□□□□□ -0.83
COL28A1-205ENST00000453441 ANP32AP39687 249 aaKnown RBP9.88□□□□□ -0.83
COL28A1-205ENST00000453441 Q4G0T1 1027 aa9.88□□□□□ -0.83
COL28A1-205ENST00000453441 METTL7BQ6UX53 244 aa9.88□□□□□ -0.83
COL28A1-205ENST00000453441 PIK3AP1Q6ZUJ8 805 aa9.88□□□□□ -0.83
COL28A1-205ENST00000453441 BRAPQ7Z569 592 aa9.88□□□□□ -0.83
COL28A1-205ENST00000453441 TLK2Q86UE8 772 aa9.88□□□□□ -0.83
COL28A1-205ENST00000453441 NOSTRINQ8IVI9 506 aa9.88□□□□□ -0.83
COL28A1-205ENST00000453441 MBOAT7Q96N66 472 aa9.88□□□□□ -0.83
COL28A1-205ENST00000453441 PDGFCQ9NRA1 345 aa9.88□□□□□ -0.83
COL28A1-205ENST00000453441 TCEAL9Q9UHQ7 104 aa9.88□□□□□ -0.83
COL28A1-205ENST00000453441 NFASCO94856 1347 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 SYNRGQ9UMZ2 1314 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 IGLV3-22A0A075B6J6 115 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 CCDC85CA6NKD9 419 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 KBTBD13C9JR72 458 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 TBX3O15119 743 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 ADAMTS4O75173 837 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 CABYRO75952 493 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 S1PR4O95977 384 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 TFRCP02786 760 aaKnown RBP9.87□□□□□ -0.83
COL28A1-205ENST00000453441 GUCY1B3Q02153 619 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 NR5A1Q13285 461 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 INF2Q27J81 1249 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 RILPL1Q5EBL4 403 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 PLA2G4DQ86XP0 818 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 DHX37Q8IY37 1157 aaKnown RBP9.87□□□□□ -0.83
COL28A1-205ENST00000453441 OR6J1Q8NGC5 347 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 PGBD1Q96JS3 809 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 RIT2Q99578 217 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 SDF4Q9BRK5 362 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 MLXIPQ9HAP2 919 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 KCNH7Q9NS40 1196 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 GJB4Q9NTQ9 266 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 TBC1D22BQ9NU19 505 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms