RNA–Protein interactions for RNA: ENST00000453260.6

TNFRSF25-207, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-207ENST00000453260 LCHNA4D1U4 455 aa21.08■□□□□ 0.97
TNFRSF25-207ENST00000453260 ITGB5P18084 799 aa21.08■□□□□ 0.97
TNFRSF25-207ENST00000453260 COL9A3Q14050 684 aaPredicted RBP21.08■□□□□ 0.97
TNFRSF25-207ENST00000453260 UBE2SQ16763 222 aa21.08■□□□□ 0.97
TNFRSF25-207ENST00000453260 APOA5Q6Q788 366 aa21.08■□□□□ 0.97
TNFRSF25-207ENST00000453260 MYOCDQ8IZQ8 938 aa21.08■□□□□ 0.97
TNFRSF25-207ENST00000453260 ADAMTS19Q8TE59 1207 aa21.08■□□□□ 0.97
TNFRSF25-207ENST00000453260 UBIAD1Q9Y5Z9 338 aa21.08■□□□□ 0.97
TNFRSF25-207ENST00000453260 MICAL3Q7RTP6 2002 aa21.07■□□□□ 0.96
TNFRSF25-207ENST00000453260 ZBTB43O43298 467 aa21.07■□□□□ 0.96
TNFRSF25-207ENST00000453260 ATP9AO75110 1047 aa21.07■□□□□ 0.96
TNFRSF25-207ENST00000453260 CTSHP09668 335 aa21.07■□□□□ 0.96
TNFRSF25-207ENST00000453260 KCNA2P16389 499 aa21.07■□□□□ 0.96
TNFRSF25-207ENST00000453260 ERVK-21P61565 698 aa21.07■□□□□ 0.96
TNFRSF25-207ENST00000453260 TSGA10IPQ3SY00 556 aa21.07■□□□□ 0.96
TNFRSF25-207ENST00000453260 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.07■□□□□ 0.96
TNFRSF25-207ENST00000453260 RSPH3Q86UC2 560 aa21.07■□□□□ 0.96
TNFRSF25-207ENST00000453260 LMBR1Q8WVP7 490 aa21.07■□□□□ 0.96
TNFRSF25-207ENST00000453260 APBB2Q92870 758 aa21.07■□□□□ 0.96
TNFRSF25-207ENST00000453260 GLG1Q92896 1179 aa21.07■□□□□ 0.96
TNFRSF25-207ENST00000453260 UHRF1Q96T88 793 aaPredicted RBP21.07■□□□□ 0.96
TNFRSF25-207ENST00000453260 JADE2Q9NQC1 790 aa21.07■□□□□ 0.96
TNFRSF25-207ENST00000453260 ERAP1Q9NZ08 941 aa21.07■□□□□ 0.96
TNFRSF25-207ENST00000453260 REV3LO60673 3130 aa21.07■□□□□ 0.96
TNFRSF25-207ENST00000453260 MUC3AQ02505 3323 aa21.06■□□□□ 0.96
TNFRSF25-207ENST00000453260 LINC01553A4QN01 128 aa21.06■□□□□ 0.96
TNFRSF25-207ENST00000453260 FOSP01100 380 aaPredicted RBP21.06■□□□□ 0.96
TNFRSF25-207ENST00000453260 HMGB1P09429 215 aaKnown RBP21.06■□□□□ 0.96
TNFRSF25-207ENST00000453260 NAPAP54920 295 aa21.06■□□□□ 0.96
TNFRSF25-207ENST00000453260 ADAM17P78536 824 aa21.06■□□□□ 0.96
TNFRSF25-207ENST00000453260 EXOSC10Q01780 885 aaKnown RBP21.06■□□□□ 0.96
TNFRSF25-207ENST00000453260 RTN1Q16799 776 aa21.06■□□□□ 0.96
TNFRSF25-207ENST00000453260 TAF2Q6P1X5 1199 aa21.06■□□□□ 0.96
TNFRSF25-207ENST00000453260 TNPO1Q92973 898 aaKnown RBP21.06■□□□□ 0.96
TNFRSF25-207ENST00000453260 GLT8D2Q9H1C3 349 aa21.06■□□□□ 0.96
TNFRSF25-207ENST00000453260 SMARCAD1Q9H4L7 1026 aa21.06■□□□□ 0.96
TNFRSF25-207ENST00000453260 MTUS1Q9ULD2 1270 aa21.06■□□□□ 0.96
TNFRSF25-207ENST00000453260 hCG_1984214I3L0E3 225 aa21.05■□□□□ 0.96
TNFRSF25-207ENST00000453260 LPXNO60711 386 aa21.05■□□□□ 0.96
TNFRSF25-207ENST00000453260 CDC45O75419 566 aa21.05■□□□□ 0.96
TNFRSF25-207ENST00000453260 FGD1P98174 961 aa21.05■□□□□ 0.96
TNFRSF25-207ENST00000453260 FAM26DQ5JW98 314 aa21.05■□□□□ 0.96
TNFRSF25-207ENST00000453260 KRT40Q6A162 431 aa21.05■□□□□ 0.96
TNFRSF25-207ENST00000453260 PPP1R18Q6NYC8 613 aa21.05■□□□□ 0.96
TNFRSF25-207ENST00000453260 ZNF713Q8N859 430 aaPredicted RBP21.05■□□□□ 0.96
TNFRSF25-207ENST00000453260 RIC8AQ9NPQ8 531 aa21.05■□□□□ 0.96
TNFRSF25-207ENST00000453260 PKD2L1Q9P0L9 805 aa21.05■□□□□ 0.96
TNFRSF25-207ENST00000453260 TELO2Q9Y4R8 837 aa21.05■□□□□ 0.96
TNFRSF25-207ENST00000453260 V9GY48 417 aaPredicted RBP21.05■□□□□ 0.96
TNFRSF25-207ENST00000453260 TCF20Q9UGU0 1960 aaKnown RBP21.05■□□□□ 0.96
TNFRSF25-207ENST00000453260 GSTTP1A0A1W2PQM5 241 aa21.04■□□□□ 0.96
TNFRSF25-207ENST00000453260 TFF2Q03403 129 aa21.04■□□□□ 0.96
TNFRSF25-207ENST00000453260 PPFIA1Q13136 1202 aa21.04■□□□□ 0.96
TNFRSF25-207ENST00000453260 WWC2Q6AWC2 1192 aa21.04■□□□□ 0.96
TNFRSF25-207ENST00000453260 RPAINQ86UA6 219 aa21.04■□□□□ 0.96
TNFRSF25-207ENST00000453260 HLA-CQ95604 372 aa21.04■□□□□ 0.96
TNFRSF25-207ENST00000453260 AZI2Q9H6S1 392 aa21.04■□□□□ 0.96
TNFRSF25-207ENST00000453260 SUGCTQ9HAC7 445 aa21.04■□□□□ 0.96
TNFRSF25-207ENST00000453260 CNTNAP5Q8WYK1 1306 aa21.04■□□□□ 0.96
TNFRSF25-207ENST00000453260 XIRP2A4UGR9 3374 aa21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 RPLP2P05387 115 aaKnown RBP21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 BMP1P13497 986 aa21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 ADCY7P51828 1080 aa21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 HTRA4P83105 476 aaPredicted RBP21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 MKRN4PQ13434 485 aaPredicted RBP21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 SPRED2Q7Z698 418 aa21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 GDPD5Q8WTR4 605 aa21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 TOP1MTQ969P6 601 aa21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 TCEANC2Q96MN5 208 aa21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 SAMD11Q96NU1 681 aa21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 YME1L1Q96TA2 773 aa21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 MXRA8Q9BRK3 442 aa21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 SDF4Q9BRK5 362 aa21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 IFIH1Q9BYX4 1025 aaKnown RBP21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 JPH1Q9HDC5 661 aaPredicted RBP21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 KCNH7Q9NS40 1196 aa21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 SLC9A2Q9UBY0 812 aa21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 BRPF3Q9ULD4 1205 aa21.03■□□□□ 0.96
TNFRSF25-207ENST00000453260 SIP14410 1827 aa21.02■□□□□ 0.96
TNFRSF25-207ENST00000453260 KLF18A0A0U1RQI7 1052 aa21.02■□□□□ 0.96
TNFRSF25-207ENST00000453260 CCDC196A0A1B0GTZ2 297 aa21.02■□□□□ 0.96
TNFRSF25-207ENST00000453260 SMCO2A6NFE2 343 aa21.02■□□□□ 0.96
TNFRSF25-207ENST00000453260 RRN3P2A6NIE6 340 aa21.02■□□□□ 0.96
TNFRSF25-207ENST00000453260 GOLGA8AA7E2F4 631 aa21.02■□□□□ 0.96
TNFRSF25-207ENST00000453260 GOLGA8BA8MQT2 603 aa21.02■□□□□ 0.96
TNFRSF25-207ENST00000453260 MARK3P27448 753 aa21.02■□□□□ 0.96
TNFRSF25-207ENST00000453260 RCAN1P53805 252 aa21.02■□□□□ 0.96
TNFRSF25-207ENST00000453260 GRIK4Q16099 956 aa21.02■□□□□ 0.96
TNFRSF25-207ENST00000453260 RASEFQ8IZ41 740 aa21.02■□□□□ 0.96
TNFRSF25-207ENST00000453260 FBXO22Q8NEZ5 403 aa21.02■□□□□ 0.96
TNFRSF25-207ENST00000453260 TUBE1Q9UJT0 475 aa21.02■□□□□ 0.96
TNFRSF25-207ENST00000453260 NAP1L2Q9ULW6 460 aaPredicted RBP21.02■□□□□ 0.96
TNFRSF25-207ENST00000453260 BRWD1Q9NSI6 2320 aa21.02■□□□□ 0.96
TNFRSF25-207ENST00000453260 UPP2O95045 317 aa21.01■□□□□ 0.95
TNFRSF25-207ENST00000453260 ADCK5Q3MIX3 580 aa21.01■□□□□ 0.95
TNFRSF25-207ENST00000453260 SKAP1Q86WV1 359 aa21.01■□□□□ 0.95
TNFRSF25-207ENST00000453260 SP7Q8TDD2 431 aaPredicted RBP21.01■□□□□ 0.95
TNFRSF25-207ENST00000453260 BARHL2Q9NY43 387 aa21.01■□□□□ 0.95
TNFRSF25-207ENST00000453260 NFASCO94856 1347 aa21.01■□□□□ 0.95
TNFRSF25-207ENST00000453260 CHRNA1P02708 482 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms