RNA–Protein interactions for RNA: ENST00000453141.5

HDLBP-226, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-226ENST00000453141 ATP2A2P16615 1042 aaKnown RBP8.69□□□□□ -1.02
HDLBP-226ENST00000453141 LIG1P18858 919 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 ADD1P35611 737 aaKnown RBP8.69□□□□□ -1.02
HDLBP-226ENST00000453141 TRAF1Q13077 416 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 BFSP2Q13515 415 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 GRM4Q14833 912 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 DGKDQ16760 1214 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 CCDC73Q6ZRK6 1079 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 DEFB128Q7Z7B8 93 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 CATIPQ7Z7H3 387 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 HOMER1Q86YM7 354 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 SAMD3Q8N6K7 520 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 CCDC155Q8N6L0 562 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 RETREG2Q8NC44 543 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 PHKBQ93100 1093 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 EMID1Q96A84 441 aaPredicted RBP8.69□□□□□ -1.02
HDLBP-226ENST00000453141 USP28Q96RU2 1077 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 RBSNQ9H1K0 784 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 NKX2-4Q9H2Z4 354 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 RRAGDQ9NQL2 400 aaPredicted RBP8.69□□□□□ -1.02
HDLBP-226ENST00000453141 RBM28Q9NW13 759 aaKnown RBP8.69□□□□□ -1.02
HDLBP-226ENST00000453141 MRVI1Q9Y6F6 885 aa8.69□□□□□ -1.02
HDLBP-226ENST00000453141 DEXIO95424 95 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 IQCF3P0C7M6 154 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 ACTN1P12814 892 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 HOXA13P31271 388 aaPredicted RBP8.68□□□□□ -1.02
HDLBP-226ENST00000453141 RABGGTBP53611 331 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 TROAPQ12815 778 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 PGM5Q15124 567 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 STK38Q15208 465 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 NTRK3Q16288 839 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 PTGISQ16647 500 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 SLC35G1Q2M3R5 365 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 HS1BP3Q53T59 392 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 MYSM1Q5VVJ2 828 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 PPP2R2DQ66LE6 453 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 KRT40Q6A162 431 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 SESTD1Q86VW0 696 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 DHX37Q8IY37 1157 aaKnown RBP8.68□□□□□ -1.02
HDLBP-226ENST00000453141 USP38Q8NB14 1042 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 PPTC7Q8NI37 304 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 CAGE1Q8TC20 777 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 KCNG4Q8TDN1 519 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 KAT2BQ92831 832 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 PIGSQ96S52 555 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 PDCD2LQ9BRP1 358 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 FTOQ9C0B1 505 aaKnown RBP eCLIP8.68□□□□□ -1.02
HDLBP-226ENST00000453141 CLSTN2Q9H4D0 955 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 RIOX1Q9H6W3 641 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 FAM217BQ9NTX9 383 aaPredicted RBP8.68□□□□□ -1.02
HDLBP-226ENST00000453141 DDX41Q9UJV9 622 aaKnown RBP8.68□□□□□ -1.02
HDLBP-226ENST00000453141 YBX2Q9Y2T7 364 aaKnown RBP8.68□□□□□ -1.02
HDLBP-226ENST00000453141 PCDHA11Q9Y5I1 949 aa8.68□□□□□ -1.02
HDLBP-226ENST00000453141 PNMA6FA0A0J9YX94 578 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 CYTH3O43739 400 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 RGS20O76081 388 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 F2P00734 622 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 ZNF286BP0CG31 522 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 MYCLP12524 364 aaPredicted RBP8.67□□□□□ -1.02
HDLBP-226ENST00000453141 AKAP17AQ02040 695 aaKnown RBP8.67□□□□□ -1.02
HDLBP-226ENST00000453141 CEBPZQ03701 1054 aaKnown RBP8.67□□□□□ -1.02
HDLBP-226ENST00000453141 LAMC2Q13753 1193 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 SAFBQ15424 915 aaKnown RBP eCLIP8.67□□□□□ -1.02
HDLBP-226ENST00000453141 KIAA1217Q5T5P2 1943 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 GDF6Q6KF10 455 aaPredicted RBP8.67□□□□□ -1.02
HDLBP-226ENST00000453141 KCNV1Q6PIU1 500 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 VSIG10LQ86VR7 867 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 C7orf31Q8N865 590 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 CTCFLQ8NI51 663 aaPredicted RBP8.67□□□□□ -1.02
HDLBP-226ENST00000453141 AFAP1L1Q8TED9 768 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 CNTNAP5Q8WYK1 1306 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 TRIM44Q96DX7 344 aaPredicted RBP8.67□□□□□ -1.02
HDLBP-226ENST00000453141 PGBD1Q96JS3 809 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 AIFM3Q96NN9 605 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 CTAGE1Q96RT6 745 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 SLC9A7Q96T83 725 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 KATNAL1Q9BW62 490 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 RNF26Q9BY78 433 aaPredicted RBP8.67□□□□□ -1.02
HDLBP-226ENST00000453141 TNMDQ9H2S6 317 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 DACT1Q9NYF0 836 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 RTEL1Q9NZ71 1219 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 GTF2IRD1Q9UHL9 959 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 BAZ2BQ9UIF8 2168 aaKnown RBP8.67□□□□□ -1.02
HDLBP-226ENST00000453141 RCOR1Q9UKL0 485 aa8.67□□□□□ -1.02
HDLBP-226ENST00000453141 GBF1Q92538 1859 aa8.66□□□□□ -1.02
HDLBP-226ENST00000453141 XIRP2A4UGR9 3374 aa8.66□□□□□ -1.02
HDLBP-226ENST00000453141 ESPNB1AK53 854 aa8.66□□□□□ -1.02
HDLBP-226ENST00000453141 KIF28PB7ZC32 967 aa8.66□□□□□ -1.02
HDLBP-226ENST00000453141 GCOM1H8Y6P7 765 aaPredicted RBP8.66□□□□□ -1.02
HDLBP-226ENST00000453141 BAIAP3O94812 1187 aa8.66□□□□□ -1.02
HDLBP-226ENST00000453141 GGPS1O95749 300 aa8.66□□□□□ -1.02
HDLBP-226ENST00000453141 CA3P07451 260 aa8.66□□□□□ -1.02
HDLBP-226ENST00000453141 TPM2P07951 284 aa8.66□□□□□ -1.02
HDLBP-226ENST00000453141 POLR2MP0CAP2 368 aa8.66□□□□□ -1.02
HDLBP-226ENST00000453141 CCDC192P0DO97 292 aa8.66□□□□□ -1.02
HDLBP-226ENST00000453141 TGFB3P10600 412 aa8.66□□□□□ -1.02
HDLBP-226ENST00000453141 MYOGP15173 224 aa8.66□□□□□ -1.02
HDLBP-226ENST00000453141 SELPP16109 830 aa8.66□□□□□ -1.02
HDLBP-226ENST00000453141 XBP1P17861 261 aa8.66□□□□□ -1.02
HDLBP-226ENST00000453141 UBA1P22314 1058 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms