RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 NSUN7Q8NE18 718 aaKnown RBP15.14■□□□□ 0.01
RAPGEF3-205ENST00000449771 DDX27Q96GQ7 796 aaKnown RBP15.14■□□□□ 0.01
RAPGEF3-205ENST00000449771 LRGUKQ96M69 825 aa15.14■□□□□ 0.01
RAPGEF3-205ENST00000449771 PIH1D3Q9NQM4 214 aaKnown RBP15.14■□□□□ 0.01
RAPGEF3-205ENST00000449771 USP6P35125 1406 aa15.14■□□□□ 0.01
RAPGEF3-205ENST00000449771 BNIP3LO60238 219 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 BAG2O95816 211 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 CNPY4Q8N129 248 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 HINFPQ9BQA5 517 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 SGO2Q562F6 1265 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 GRAMD1CQ8IYS0 662 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 FAM133AQ8N9E0 248 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 SDCCAG3Q96C92 435 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 POLIQ9UNA4 740 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 PCDHA5Q9Y5H7 936 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 PRPSAP2O60256 369 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 IL1RL1Q01638 556 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 RBL2Q08999 1139 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 EFCAB13Q8IY85 973 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 MRPL47Q9HD33 250 aaKnown RBP15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 EMILIN3Q9NT22 766 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 CRKP46108 304 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 SLC12A1Q13621 1099 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 GOLGA8IPA6NC78 632 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 GOLGA8JA6NMD2 632 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 RFC1P35251 1148 aaPredicted RBP15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 SNCBQ16143 134 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 E2F4Q16254 413 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 TMEM179Q6ZVK1 233 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 TTC30AQ86WT1 665 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 SH3RF3Q8TEJ3 882 aaPredicted RBP15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 CALN1Q9BXU9 219 aa15.13■□□□□ 0.01
RAPGEF3-205ENST00000449771 MYO5CQ9NQX4 1742 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 ERBB3P21860 1342 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 OSBP2Q969R2 916 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 STK25O00506 426 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 GH2P01242 217 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 SLITRK6Q9H5Y7 841 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 NR5A1Q13285 461 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 RASGRF1Q13972 1273 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 MUM1Q2TAK8 710 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 ICE2Q659A1 982 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 RASEFQ8IZ41 740 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 TCP11Q8WWU5 503 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 POLR3EQ9NVU0 708 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 PFDN1O60925 122 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 CACNB3P54284 484 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 STX1BP61266 288 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 CATSPER4Q7RTX7 472 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 DCAF4Q8WV16 495 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 ZSWIM5Q9P217 1185 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 MAN1B1Q9UKM7 699 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 USH1CQ9Y6N9 552 aa15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 NFX1Q12986 1120 aaKnown RBP15.12■□□□□ 0.01
RAPGEF3-205ENST00000449771 BASP1P80723 227 aaKnown RBP15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 KIF23Q02241 960 aaPredicted RBP15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 TACO1Q9BSH4 297 aaKnown RBP15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 FAM8A1Q9UBU6 413 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 GCC2Q8IWJ2 1684 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 ROBO2Q9HCK4 1378 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 COG7P83436 770 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 KRT33BQ14525 404 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 ARL13BQ3SXY8 428 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 FAM83BQ5T0W9 1011 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 OR6B3Q8NGW1 331 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 EFCAB8A8MWE9 144 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 ASNSP08243 561 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 GNAT1P11488 350 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 PLCG1P19174 1290 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 MXI1P50539 228 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 FKBP3Q00688 224 aaKnown RBP15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 GOLGA8FQ08AF8 430 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 GOLGA8DPQ0D2H9 430 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 THEM5Q8N1Q8 247 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 ZNF335Q9H4Z2 1342 aaPredicted RBP15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 ECE2O60344 883 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 SMIM24O75264 130 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 CDC25AP30304 524 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 TRIM68Q6AZZ1 485 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 C1orf228Q6PIY5 440 aa15.11■□□□□ 0.01
RAPGEF3-205ENST00000449771 K7ERI5 159 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 ENC1O14682 589 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 ECEL1O95672 775 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 PKP1Q13835 747 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 SEPT2Q15019 361 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 PHLDB3Q6NSJ2 640 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 CFAP36Q96G28 342 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 NVLO15381 856 aaKnown RBP15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 LUC7L3O95232 432 aaKnown RBP15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 TTC4O95801 387 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 JAK3P52333 1124 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 SH3BGRP55822 239 aaPredicted RBP15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 ELMOD1Q8N336 334 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 FIS1Q9Y3D6 152 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 GOLGA8QA0A0J9YX86 632 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 GOLGA8OA6NCC3 632 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 GOLGA8NF8WBI6 632 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 SART1O43290 800 aaKnown RBP15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 RPS6KA4O75676 772 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 CIITAP33076 1130 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms