RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 ALPK3Q96L96 1907 aa11.13□□□□□ -0.63
CCDC171-203ENST00000449575 DHX15O43143 795 aaKnown RBP11.13□□□□□ -0.63
CCDC171-203ENST00000449575 FARP2O94887 1054 aaPredicted RBP11.13□□□□□ -0.63
CCDC171-203ENST00000449575 NLRX1Q86UT6 975 aa11.13□□□□□ -0.63
CCDC171-203ENST00000449575 AFG1LQ8WV93 481 aa11.13□□□□□ -0.63
CCDC171-203ENST00000449575 HAS1Q92839 578 aa11.13□□□□□ -0.63
CCDC171-203ENST00000449575 OGDHLQ9ULD0 1010 aa11.13□□□□□ -0.63
CCDC171-203ENST00000449575 CBX1P83916 185 aa11.12□□□□□ -0.63
CCDC171-203ENST00000449575 LRRC41Q15345 812 aa11.12□□□□□ -0.63
CCDC171-203ENST00000449575 CELF3Q5SZQ8 465 aaKnown RBP11.12□□□□□ -0.63
CCDC171-203ENST00000449575 OR6J1Q8NGC5 347 aa11.12□□□□□ -0.63
CCDC171-203ENST00000449575 ETNPPLQ8TBG4 499 aa11.12□□□□□ -0.63
CCDC171-203ENST00000449575 TMEM106CQ9BVX2 250 aa11.12□□□□□ -0.63
CCDC171-203ENST00000449575 KAT6AQ92794 2004 aa11.12□□□□□ -0.63
CCDC171-203ENST00000449575 RBAK-RBAKDNI3L0D1 243 aa11.12□□□□□ -0.63
CCDC171-203ENST00000449575 IPO5O00410 1097 aaKnown RBP11.12□□□□□ -0.63
CCDC171-203ENST00000449575 TFRCP02786 760 aaKnown RBP11.12□□□□□ -0.63
CCDC171-203ENST00000449575 TGFB3P10600 412 aa11.12□□□□□ -0.63
CCDC171-203ENST00000449575 GJA9P57773 515 aa11.12□□□□□ -0.63
CCDC171-203ENST00000449575 Q4G0T1 1027 aa11.12□□□□□ -0.63
CCDC171-203ENST00000449575 TTC38Q5R3I4 469 aa11.12□□□□□ -0.63
CCDC171-203ENST00000449575 PPP4R3AQ6IN85 833 aa11.12□□□□□ -0.63
CCDC171-203ENST00000449575 ZNF577Q9BSK1 485 aa11.12□□□□□ -0.63
CCDC171-203ENST00000449575 SCN10AQ9Y5Y9 1956 aa11.12□□□□□ -0.63
CCDC171-203ENST00000449575 LAMA2P24043 3122 aaKnown RBP11.12□□□□□ -0.63
CCDC171-203ENST00000449575 CCNE2O96020 404 aa11.11□□□□□ -0.63
CCDC171-203ENST00000449575 GH1P01241 217 aa11.11□□□□□ -0.63
CCDC171-203ENST00000449575 GNASQ5JWF2 1037 aa11.11□□□□□ -0.63
CCDC171-203ENST00000449575 CCSAPQ6IQ19 270 aaPredicted RBP11.11□□□□□ -0.63
CCDC171-203ENST00000449575 NIPA1Q7RTP0 329 aa11.11□□□□□ -0.63
CCDC171-203ENST00000449575 KLHDC9Q8NEP7 349 aa11.11□□□□□ -0.63
CCDC171-203ENST00000449575 SYAP1Q96A49 352 aaPredicted RBP11.11□□□□□ -0.63
CCDC171-203ENST00000449575 UPF3AQ9H1J1 476 aaKnown RBP11.11□□□□□ -0.63
CCDC171-203ENST00000449575 PCDH10Q9P2E7 1040 aa11.11□□□□□ -0.63
CCDC171-203ENST00000449575 MSCO60682 206 aa11.11□□□□□ -0.63
CCDC171-203ENST00000449575 ZSCAN22P10073 491 aaPredicted RBP11.11□□□□□ -0.63
CCDC171-203ENST00000449575 KCNA10Q16322 511 aa11.11□□□□□ -0.63
CCDC171-203ENST00000449575 FSCN1Q16658 493 aaKnown RBP11.11□□□□□ -0.63
CCDC171-203ENST00000449575 MOXD1Q6UVY6 613 aa11.11□□□□□ -0.63
CCDC171-203ENST00000449575 FERMT2Q96AC1 680 aa11.11□□□□□ -0.63
CCDC171-203ENST00000449575 SPATA33Q96N06 139 aa11.11□□□□□ -0.63
CCDC171-203ENST00000449575 SENP7Q9BQF6 1050 aa11.11□□□□□ -0.63
CCDC171-203ENST00000449575 MLXIPQ9HAP2 919 aa11.11□□□□□ -0.63
CCDC171-203ENST00000449575 KCNMB3Q9NPA1 279 aa11.11□□□□□ -0.63
CCDC171-203ENST00000449575 METTL7BQ6UX53 244 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 TRIM50Q86XT4 487 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 C4orf32Q8N8J7 132 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 SLC5A5Q92911 643 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 GSTTP1A0A1W2PQM5 241 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 MAFGO15525 162 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 NEMFO60524 1076 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 PSMD10O75832 226 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 BRD1O95696 1058 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 F13A1P00488 732 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 ASGR1P07306 291 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 MMP3P08254 477 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 ZNF286BP0CG31 522 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 SETQ01105 290 aaPredicted RBP11.1□□□□□ -0.63
CCDC171-203ENST00000449575 CEBPZQ03701 1054 aaKnown RBP11.1□□□□□ -0.63
CCDC171-203ENST00000449575 UVSSAQ2YD98 709 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 KCNV1Q6PIU1 500 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 CXCL17Q6UXB2 119 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 ZNF710Q8N1W2 664 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 GPR20Q99678 358 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 AP5M1Q9H0R1 490 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 CLIC4Q9Y696 253 aa11.1□□□□□ -0.63
CCDC171-203ENST00000449575 A6NJR5 290 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 NKRFO15226 690 aaKnown RBP eCLIP11.09□□□□□ -0.63
CCDC171-203ENST00000449575 CHMP2AO43633 222 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 PRPF40AO75400 957 aaKnown RBP11.09□□□□□ -0.63
CCDC171-203ENST00000449575 PTGDRQ13258 359 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 NEDD9Q14511 834 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 PDCL2Q8N4E4 241 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 IPO4Q8TEX9 1081 aaKnown RBP11.09□□□□□ -0.63
CCDC171-203ENST00000449575 PAWRQ96IZ0 340 aaKnown RBP11.09□□□□□ -0.63
CCDC171-203ENST00000449575 CDHR1Q96JP9 859 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 MTMR9Q96QG7 549 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 JPH1Q9HDC5 661 aaPredicted RBP11.09□□□□□ -0.63
CCDC171-203ENST00000449575 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.09□□□□□ -0.63
CCDC171-203ENST00000449575 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
CCDC171-203ENST00000449575 EVPLQ92817 2033 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 EML1O00423 815 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 CAPN15O75808 1086 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 GCFC2P16383 781 aaKnown RBP11.09□□□□□ -0.63
CCDC171-203ENST00000449575 TXKP42681 527 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 PSMC6P62333 389 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 LAMC2Q13753 1193 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 IL17AQ16552 155 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 RILPL1Q5EBL4 403 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 LRCH2Q5VUJ6 765 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 BRAPQ7Z569 592 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 EMID1Q96A84 441 aaPredicted RBP11.09□□□□□ -0.63
CCDC171-203ENST00000449575 USP28Q96RU2 1077 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 UNC45AQ9H3U1 944 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 TSPY26PQ9H489 355 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 TFIP11Q9UBB9 837 aaKnown RBP11.09□□□□□ -0.63
CCDC171-203ENST00000449575 SLC9A2Q9UBY0 812 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 VAV3Q9UKW4 847 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 Q9Y3F1 56 aa11.09□□□□□ -0.63
CCDC171-203ENST00000449575 NFASCO94856 1347 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms