RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 FBXW7Q969H0 707 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 ALKBH8Q96BT7 664 aaKnown RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 ZNF184Q99676 751 aaPredicted RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 RAD21L1Q9H4I0 556 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 VPS45Q9NRW7 570 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 E9PCH4 1651 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 MYPNQ86TC9 1320 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 AXIN1O15169 862 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 SNX2O60749 519 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 IFIT2P09913 472 aaKnown RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 PTPN2P17706 415 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 RAP1GAPP47736 663 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 CSE1LP55060 971 aaKnown RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 EXOSC9Q06265 439 aaKnown RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 COX10Q12887 443 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 PDCLQ13371 301 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 SF3B3Q15393 1217 aaKnown RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 KCNV1Q6PIU1 500 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 CTAGE3PQ8IX95 158 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 ATP2A3Q93084 1043 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 PCMTD1Q96MG8 357 aaPredicted RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 SLC39A2Q9NP94 309 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 TNFRSF10DQ9UBN6 386 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 STOML2Q9UJZ1 356 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 CD2APQ9Y5K6 639 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 ADGRG1Q9Y653 693 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 PTPRTO14522 1441 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 FAM170AA1A519 330 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 TMPOP42166 694 aaKnown RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 DMPKQ09013 629 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 RFWD2Q8NHY2 731 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 NEK9Q8TD19 979 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 PIGOQ8TEQ8 1089 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 SELENOSQ9BQE4 189 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 CCDC134Q9H6E4 229 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 BABAM1Q9NWV8 329 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 G3BP2Q9UN86 482 aaKnown RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 SAMM50Q9Y512 469 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 MED14O60244 1454 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 PRAG1Q86YV5 1406 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 APOL1O14791 398 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 LRRC36Q1X8D7 754 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 PGM2Q96G03 612 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 FERMT1Q9BQL6 677 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 OSBPL10Q9BXB5 764 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 ZHX3Q9H4I2 956 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 RPAP3Q9H6T3 665 aaPredicted RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 RXFP1Q9HBX9 757 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 TYW1Q9NV66 732 aaKnown RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 SORCS3Q9UPU3 1222 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 A0A1W2PQC6 194 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 M0QX08 132 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 ZBTB7BO15156 539 aaPredicted RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 TSPAN1O60635 241 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 SASH3O75995 380 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 ZNF202O95125 648 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 HSPA8P11142 646 aaKnown RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 LIFRP42702 1097 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 RBM5P52756 815 aaKnown RBP eCLIP3.15□□□□□ -1.91
CHD9-203ENST00000447540 RAD23BP54727 409 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 EIF4A2Q14240 407 aaKnown RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 RCN2Q14257 317 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 LIN52Q52LA3 116 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 TRIM65Q6PJ69 517 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 UQCC2Q9BRT2 126 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 IFT122Q9HBG6 1241 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 LMCD1Q9NZU5 365 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 ATP6V1HQ9UI12 483 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 AATKQ6ZMQ8 1374 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 FANCAO15360 1455 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 MRC2Q9UBG0 1479 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 HTR3EA5X5Y0 456 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 TMEM247A6NEH6 219 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 M0R2C6 588 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 TJP3O95049 919 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 KRT8P05787 483 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 ESRRAP11474 423 aaPredicted RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 PLEKHO1Q53GL0 409 aaPredicted RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 ATG16L1Q676U5 607 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 KIRREL3Q8IZU9 778 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 STAG2Q8N3U4 1231 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 BTBD9Q96Q07 612 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 COMMD8Q9NX08 183 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 PCDHB2Q9Y5E7 798 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 SHROOM2Q13796 1616 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 PTCH1Q13635 1447 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 BIN1O00499 593 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 SEC31AO94979 1220 aaKnown RBP3.14□□□□□ -1.91
CHD9-203ENST00000447540 RESTQ13127 1097 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 PAPD7Q5XG87 772 aaKnown RBP3.14□□□□□ -1.91
CHD9-203ENST00000447540 TTC27Q6P3X3 843 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 BCL2L13Q9BXK5 485 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 CSRNP2Q9H175 543 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 DHX36Q9H2U1 1008 aaKnown RBP3.14□□□□□ -1.91
CHD9-203ENST00000447540 MBD2Q9UBB5 411 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 TRIM10Q9UDY6 481 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 ADGRL2O95490 1459 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 MYO10Q9HD67 2058 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 PODXLO00592 558 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 GADD45BO75293 160 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms